MGE detailed information
MGE type: Conjugative plasmid MGE length: 68938 bp
Accession: NZ_CP091693 Location: 1..68938 Organism: Escherichia coli strain KMi006 Replicon: plasmid pKMi006_2
Accession: NZ_CP091693 Location: 1..68938 Organism: Escherichia coli strain KMi006 Replicon: plasmid pKMi006_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6L65_RS24505 (245) | 245..5515 | - | 5271 | WP_240724052.1 | Multifunctional conjugation protein TraI | Relaxase |
| L6L65_RS24510 (5515) | 5515..7677 | - | 2163 | WP_196121223.1 | type IV conjugative transfer system coupling protein TraD | - |
| L6L65_RS24515 (7674) | 7674..8453 | - | 780 | WP_240724053.1 | hypothetical protein | - |
| L6L65_RS24520 (8656) | 8656..9372 | - | 717 | WP_276323147.1 | conjugal transfer complement resistance protein TraT | - |
| L6L65_RS24525 (9400) | 9400..9909 | - | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| L6L65_RS24530 (9906) | 9906..12731 | - | 2826 | WP_012881124.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| L6L65_RS24535 (12728) | 12728..14101 | - | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| L6L65_RS24540 (14088) | 14088..14480 | - | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| L6L65_RS24545 (14461) | 14461..14808 | - | 348 | WP_011666494.1 | P-type conjugative transfer protein TrbJ | - |
| L6L65_RS24550 (14738) | 14738..15283 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| L6L65_RS24555 (15270) | 15270..15554 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| L6L65_RS24560 (15635) | 15635..15970 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| L6L65_RS24565 (15951) | 15951..16292 | - | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| L6L65_RS24570 (16306) | 16306..17049 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| L6L65_RS24575 (17042) | 17042..17299 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| L6L65_RS24580 (17326) | 17326..19176 | - | 1851 | WP_117389471.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| L6L65_RS24585 (19173) | 19173..19811 | - | 639 | WP_015058995.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| L6L65_RS24590 (19820) | 19820..20125 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| L6L65_RS24595 (20155) | 20155..21147 | - | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| L6L65_RS24600 (21144) | 21144..21776 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| L6L65_RS24605 (21773) | 21773..22159 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| L6L65_RS24610 (22156) | 22156..24786 | - | 2631 | WP_000069772.1 | type IV secretion system protein TraC | - |
| L6L65_RS24615 (24912) | 24912..25259 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| L6L65_RS24620 (25287) | 25287..25505 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| L6L65_RS24625 (25604) | 25604..26080 | - | 477 | WP_012881127.1 | hypothetical protein | - |
| L6L65_RS24630 (26073) | 26073..26294 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| L6L65_RS24635 (26429) | 26429..26944 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| L6L65_RS24640 (26941) | 26941..27261 | - | 321 | WP_012881128.1 | conjugal transfer protein TrbD | - |
| L6L65_RS24645 (27248) | 27248..27838 | - | 591 | WP_012881129.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| L6L65_RS24650 (27828) | 27828..29255 | - | 1428 | WP_012881130.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| L6L65_RS24655 (29255) | 29255..29983 | - | 729 | WP_001230769.1 | type-F conjugative transfer system secretin TraK | - |
| L6L65_RS24660 (29970) | 29970..30536 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| L6L65_RS24665 (30558) | 30558..30869 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| L6L65_RS24670 (30884) | 30884..31246 | - | 363 | WP_012881131.1 | type IV conjugative transfer system pilin TraA | - |
| L6L65_RS24675 (31280) | 31280..31507 | - | 228 | WP_000589556.1 | conjugal transfer relaxosome protein TraY | - |
| L6L65_RS24680 (31627) | 31627..32274 | - | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| L6L65_RS24685 (32466) | 32466..32849 | - | 384 | WP_001151529.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| L6L65_RS24690 (33182) | 33182..33772 | + | 591 | WP_000252683.1 | hypothetical protein | VF |
| L6L65_RS24695 (34069) | 34069..34890 | - | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| L6L65_RS24700 (35001) | 35001..35297 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| L6L65_RS24705 (35597) | 35597..35893 | + | 297 | Protein_41 | hypothetical protein | - |
| L6L65_RS24710 (36194) | 36194..36319 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| L6L65_RS24715 (36261) | 36261..36410 | - | 150 | Protein_43 | plasmid maintenance protein Mok | - |
| L6L65_RS24720 (36432) | 36432..36611 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| - (36396) | 36396..36620 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (36396) | 36396..36620 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (36396) | 36396..36620 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (36396) | 36396..36620 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| L6L65_RS24725 (36589) | 36589..37351 | - | 763 | Protein_45 | plasmid SOS inhibition protein A | - |
| L6L65_RS24730 (37348) | 37348..37782 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| L6L65_RS24735 (37851) | 37851..39815 | - | 1965 | WP_117389470.1 | ParB/RepB/Spo0J family partition protein | - |
| L6L65_RS24740 (39876) | 39876..40109 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| L6L65_RS24745 (40167) | 40167..40694 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| L6L65_RS24750 (40996) | 40996..41457 | + | 462 | Protein_50 | hypothetical protein | - |
| L6L65_RS24755 (41543) | 41543..42106 | - | 564 | WP_016240496.1 | class I SAM-dependent methyltransferase | - |
| L6L65_RS24760 (42153) | 42153..43514 | - | 1362 | WP_025746315.1 | DUF3560 domain-containing protein | - |
| L6L65_RS24765 (43566) | 43566..43796 | - | 231 | WP_000218644.1 | hypothetical protein | - |
| L6L65_RS24770 (44312) | 44312..44560 | + | 249 | WP_071587243.1 | hypothetical protein | - |
| L6L65_RS24775 (44839) | 44839..45030 | - | 192 | WP_001027511.1 | hypothetical protein | - |
| L6L65_RS24780 (45027) | 45027..45449 | - | 423 | WP_000271739.1 | DUF1380 family protein | - |
| L6L65_RS24785 (45496) | 45496..45921 | - | 426 | WP_001198891.1 | antirestriction protein | - |
| L6L65_RS24790 (46334) | 46334..47104 | - | 771 | WP_015058993.1 | hypothetical protein | - |
| L6L65_RS24795 (47149) | 47149..47583 | - | 435 | WP_015058992.1 | DUF1380 family protein | - |
| L6L65_RS24800 (47597) | 47597..47818 | - | 222 | WP_001104880.1 | hypothetical protein | - |
| L6L65_RS24805 (47819) | 47819..48502 | - | 684 | WP_000085883.1 | DNA methylase | - |
| L6L65_RS24810 (48579) | 48579..48872 | - | 294 | WP_032146011.1 | hypothetical protein | - |
| L6L65_RS24815 (49019) | 49019..49981 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| L6L65_RS24820 (49984) | 49984..50334 | + | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| L6L65_RS24825 (50535) | 50535..50738 | - | 204 | Protein_65 | hypothetical protein | - |
| L6L65_RS24830 (50866) | 50866..51100 | - | 235 | Protein_66 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| L6L65_RS24840 (54009) | 54009..54746 | - | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| L6L65_RS24845 (54872) | 54872..54967 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| L6L65_RS24850 (55102) | 55102..55806 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| L6L65_RS24855 (55860) | 55860..56027 | + | 168 | Protein_71 | IS110 family transposase | - |
| L6L65_RS24860 (56405) | 56405..57877 | - | 1473 | WP_000621194.1 | ATP-binding protein | - |
| L6L65_RS24865 (57874) | 57874..58596 | - | 723 | WP_001057737.1 | Transcriptional regulatory protein WalR | VF |
| L6L65_RS24870 (58738) | 58738..59337 | + | 600 | WP_001177183.1 | cytochrome b/b6 domain-containing protein | - |
| L6L65_RS24875 (59348) | 59348..60118 | + | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
| L6L65_RS24880 (60148) | 60148..60405 | + | 258 | WP_167791825.1 | hypothetical protein | - |
| L6L65_RS24885 (60555) | 60555..60653 | - | 99 | WP_137491101.1 | transposase | - |
| L6L65_RS24890 (60846) | 60846..61154 | + | 309 | Protein_78 | IS91 family transposase ISSbo1 | Transposase |
| L6L65_RS24895 (62182) | 62182..63039 | - | 858 | WP_016240488.1 | incFII family plasmid replication initiator RepA | - |
| L6L65_RS24900 (63032) | 63032..63106 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| L6L65_RS24905 (63351) | 63351..63599 | - | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| L6L65_RS24910 (63884) | 63884..64033 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (64078) | 64078..64137 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (64078) | 64078..64137 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (64078) | 64078..64137 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (64078) | 64078..64137 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| L6L65_RS24915 (64280) | 64280..64753 | - | 474 | WP_016240489.1 | hypothetical protein | - |
| L6L65_RS24920 (64908) | 64908..65498 | - | 591 | WP_033807967.1 | DUF2726 domain-containing protein | - |
| L6L65_RS24925 (65536) | 65536..65745 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| L6L65_RS24930 (65791) | 65791..66252 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| L6L65_RS24935 (66497) | 66497..66709 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| L6L65_RS24940 (66838) | 66838..67398 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| L6L65_RS24945 (67501) | 67501..68361 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|