NZ_CP0916921..154958

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 154958 bp
Accession: NZ_CP091692        Location: 1..154958         Organism: Escherichia coli strain KMi006       Replicon: plasmid pKMi006_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
L6L65_RS23615 (181) 181..438 + 258 WP_000864314.1 conjugal transfer protein TrbE -
L6L65_RS23620 (431) 431..1174 + 744 WP_021517378.1 type-F conjugative transfer system pilin assembly protein TraF -
L6L65_RS23625 (1188) 1188..1529 + 342 WP_000556795.1 conjugal transfer protein TrbA -
L6L65_RS23630 (1510) 1510..1845 - 336 WP_000736414.1 hypothetical protein -
L6L65_RS23635 (1926) 1926..2210 + 285 WP_000624107.1 type-F conjugative transfer system pilin chaperone TraQ -
L6L65_RS23640 (2197) 2197..2742 + 546 WP_000059831.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
L6L65_RS23645 (2672) 2672..3020 + 349 Protein_7 P-type conjugative transfer protein TrbJ -
L6L65_RS23650 (3001) 3001..3393 + 393 WP_021517377.1 F-type conjugal transfer protein TrbF -
L6L65_RS23655 (3380) 3380..4465 + 1086 Protein_9 conjugal transfer pilus assembly protein TraH -
L6L65_RS23660 (4454) 4454..7018 + 2565 Protein_10 conjugal transfer mating-pair stabilization protein TraG -
L6L65_RS23665 (7015) 7015..7524 + 510 WP_000628111.1 conjugal transfer entry exclusion protein TraS -
L6L65_RS23670 (7538) 7538..8269 + 732 WP_012881123.1 conjugal transfer complement resistance protein TraT -
L6L65_RS23675 (8472) 8472..9209 + 738 WP_012881122.1 hypothetical protein -
L6L65_RS23680 (9260) 9260..11468 + 2209 Protein_14 Coupling protein TraD VF
L6L65_RS23685 (11468) 11468..16740 + 5273 Protein_15 conjugative transfer relaxase/helicase TraI -
L6L65_RS23690 (16760) 16760..16999 + 240 Protein_16 TraX family protein -
L6L65_RS23700 (18394) 18394..19200 - 807 WP_021517370.1 site-specific integrase -
L6L65_RS23705 (19201) 19201..19506 - 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
L6L65_RS23710 (19508) 19508..19726 - 219 WP_000813630.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
L6L65_RS23715 (20354) 20354..20584 + 231 WP_001261286.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
L6L65_RS23720 (20581) 20581..20997 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
L6L65_RS23725 (21072) 21072..22637 + 1566 WP_021517369.1 AAA family ATPase -
L6L65_RS23730 (22622) 22622..23644 + 1023 WP_000361402.1 helicase UvrD -
L6L65_RS23735 (24341) 24341..24342 - 2 WP_001743396.1 IS1-like element IS1A family transposase -
L6L65_RS23740 (24950) 24950..25864 + 915 WP_000949005.1 Putative metal ABC transporter substrate-binding protein Hpf VF
L6L65_RS23745 (25864) 25864..26691 + 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
L6L65_RS23750 (26688) 26688..27545 + 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
L6L65_RS23755 (27542) 27542..28399 + 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
L6L65_RS23760 (28633) 28633..30338 - 1706 Protein_30 Tn3 family transposase -
L6L65_RS23765 (30303) 30303..30632 + 330 Protein_31 Tn3 family transposase ISEc63 Transposase
L6L65_RS23770 (30913) 30913..31815 + 903 WP_000640873.1 manganese-dependent inorganic pyrophosphatase -
L6L65_RS23775 (31819) 31819..32178 + 360 WP_021517439.1 hypothetical protein -
L6L65_RS23780 (32184) 32184..32593 + 410 Protein_34 IS3 family transposase IS629 Transposase
L6L65_RS23785 (32715) 32715..33737 + 1023 WP_000255944.1 IS21 family transposase IS100kyp Transposase
L6L65_RS23790 (33734) 33734..34516 + 783 WP_077758818.1 IS21 family transposase IS100kyp Transposase
L6L65_RS23795 (34580) 34580..34882 + 303 Protein_37 IS3 family transposase IS629 Transposase
L6L65_RS23800 (35555) 35555..37063 + 1509 WP_032150976.1 group II intron reverse transcriptase/maturase -
L6L65_RS23805 (37147) 37147..37626 + 480 Protein_39 IS3 family transposase IS629 Transposase
L6L65_RS23810 (37666) 37666..37833 + 168 Protein_40 phosphopyruvate hydratase -
L6L65_RS23815 (38174) 38174..38554 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
L6L65_RS23825 (40195) 40195..41388 - 1194 WP_000095526.1 MFS transporter -
L6L65_RS23830 (41524) 41524..43248 + 1725 WP_063269228.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
L6L65_RS23835 (43249) 43249..44196 + 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF
L6L65_RS23840 (44196) 44196..45938 + 1743 WP_021517443.1 Aerobactin synthase VF
L6L65_RS23845 (45935) 45935..47268 + 1334 Protein_47 L-lysine N6-monooxygenase VF
L6L65_RS23850 (47294) 47294..49495 + 2202 WP_000973519.1 Ferric aerobactin receptor VF
L6L65_RS23855 (49725) 49725..50422 + 698 WP_094096600.1 IS1-like element IS1A family transposase -
L6L65_RS23860 (50603) 50603..51116 - 514 Protein_50 DUF4113 domain-containing protein -
L6L65_RS23865 (51177) 51177..51281 - 105 Protein_51 AAA family ATPase -
L6L65_RS23870 (51283) 51283..51606 - 324 Protein_52 IS21 family transposase IS21 Transposase
L6L65_RS23875 (52352) 52352..53329 + 978 WP_021517434.1 RepB family plasmid replication initiator protein -
L6L65_RS23880 (53608) 53608..54348 - 741 WP_021517433.1 IS91 family transposase ISMno23 Transposase
L6L65_RS23890 (55540) 55540..55797 - 258 WP_032143372.1 P fimbrial regulatory protein KS71A VF
L6L65_RS23895 (56599) 56599..56904 + 306 WP_001545784.1 Major pilu subunit operon regulatory protein PapB VF
L6L65_RS23900 (57132) 57132..57929 + 798 WP_021517431.1 Chaperone protein caf1M VF
L6L65_RS23905 (57969) 57969..60551 + 2583 WP_196121232.1 F1 capsule-anchoring protein VF
L6L65_RS23910 (60567) 60567..61010 + 444 WP_001539577.1 Protein AfaD VF
L6L65_RS23915 (61389) 61389..61562 + 174 WP_000527471.1 hypothetical protein VF
L6L65_RS23920 (61764) 61764..62246 + 483 WP_021566292.1 Dr family adhesin structural subunit DraE -
L6L65_RS23930 (64148) 64148..64375 - 228 Protein_64 IS21 family transposase ISEc12 Transposase
L6L65_RS23935 (64390) 64390..65931 - 1542 WP_001298859.1 IS21 family transposase ISEc12 Transposase
L6L65_RS23940 (66126) 66126..66275 + 150 Protein_66 IS1 family transposase -
L6L65_RS23945 (66504) 66504..66902 + 399 WP_240724050.1 conjugal transfer entry exclusion protein TraS -
L6L65_RS23950 (66916) 66916..67647 + 732 WP_000850422.1 conjugal transfer complement resistance protein TraT -
L6L65_RS23955 (67900) 67900..68455 + 556 Protein_69 TraD N-terminal domain-containing protein -
L6L65_RS23960 (68519) 68519..69223 + 705 WP_021517422.1 IS6 family transposase IS26 Transposase
L6L65_RS23965 (69305) 69305..69475 + 171 Protein_71 DsbA family protein -
L6L65_RS23970 (69465) 69465..69971 + 507 WP_000949451.1 protein disulfide oxidoreductase -
L6L65_RS23975 (70208) 70208..70969 + 762 WP_001225378.1 Na(+)-translocating NADH-quinone reductase subunit C -
L6L65_RS23980 (71316) 71316..73202 + 1887 WP_001332815.1 FTR1 family protein -
L6L65_RS23985 (73243) 73243..73770 + 528 WP_000178050.1 iron transporter -
L6L65_RS23990 (73874) 73874..75253 + 1380 WP_000119836.1 Fe-S-containing protein -
L6L65_RS23995 (75256) 75256..76539 + 1284 WP_000964653.1 ABC transporter permease -
L6L65_RS24000 (76529) 76529..77659 + 1131 WP_000729219.1 ABC transporter permease -
L6L65_RS24005 (77664) 77664..78359 + 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
L6L65_RS24010 (78346) 78346..78831 + 486 WP_001554949.1 TlpA disulfide reductase family protein -
L6L65_RS24015 (78856) 78856..79341 + 486 WP_000874189.1 hypothetical protein -
L6L65_RS24020 (79463) 79463..80095 + 633 Protein_82 histidine-type phosphatase -
L6L65_RS24025 (80245) 80245..80460 - 216 Protein_83 IS5 family transposase ISKpn26 Transposase
L6L65_RS24030 (80524) 80524..81228 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
L6L65_RS24035 (81282) 81282..81539 - 258 Protein_85 DUF3330 domain-containing protein -
L6L65_RS24040 (81742) 81742..82755 - 1014 WP_000845039.1 IS91 family transposase ISAzo26 Transposase
L6L65_RS24045 (82900) 82900..83397 + 498 WP_001083725.1 Dihydrofolate reductase ARG
L6L65_RS24050 (83509) 83509..83799 + 291 WP_001336345.1 DUF1010 domain-containing protein -
L6L65_RS24055 (83805) 83805..84643 + 839 Protein_89 Streptomycin 3''-adenylyltransferase ARG
L6L65_RS24060 (84760) 84760..85107 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
L6L65_RS24065 (85101) 85101..85940 + 840 WP_000259031.1 Dihydropteroate synthase ARG
L6L65_RS24070 (86068) 86068..86271 + 204 WP_000376616.1 hypothetical protein -
L6L65_RS24075 (86427) 86427..87632 + 1206 WP_000184001.1 chromate efflux transporter -
L6L65_RS24080 (87643) 87643..87948 + 306 WP_000130000.1 hypothetical protein Relaxase
L6L65_RS24085 (87992) 87992..88057 + 66 Protein_95 EAL domain-containing protein -
L6L65_RS24090 (88175) 88175..88939 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
L6L65_RS24095 (89432) 89432..90016 - 585 WP_001137892.1 macrolide-binding transcriptional repressor MphR(A) -
L6L65_RS24100 (90016) 90016..91254 - 1239 WP_000004159.1 macrolide resistance MFS transporter Mrx(A) -
L6L65_RS24105 (91251) 91251..92165 - 915 WP_023063803.1 hypothetical protein ARG
L6L65_RS24110 (92287) 92287..92991 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
L6L65_RS24115 (93126) 93126..93221 + 96 WP_013362819.1 23S rRNA methyltransferase attenuation leader peptide -
L6L65_RS24120 (93347) 93347..94084 + 738 WP_013362818.1 rRNA adenine N-6-methyltransferase ARG
L6L65_RS24125 (94714) 94714..95163 + 450 WP_013362817.1 hypothetical protein -
L6L65_RS24130 (95124) 95124..95465 + 342 WP_023909256.1 60 kDa chaperonin 2 VF
L6L65_RS24135 (95740) 95740..97224 + 1485 WP_032152108.1 IS91 family transposase ISVsa3 Transposase
L6L65_RS24140 (97547) 97547..98251 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
L6L65_RS24145 (98417) 98417..99277 + 861 WP_000557454.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
L6L65_RS24150 (99290) 99290..99832 + 543 WP_000587837.1 AAA family ATPase -
L6L65_RS24155 (100314) 100314..100505 - 192 WP_000951934.1 hypothetical protein -
L6L65_RS24160 (100529) 100529..100756 + 228 WP_000248278.1 hypothetical protein -
L6L65_RS24165 (100807) 100807..101943 + 1137 WP_000080861.1 DUF3883 domain-containing protein -
L6L65_RS24170 (102058) 102058..103428 + 1371 WP_000971921.1 IS1182 family transposase ISCfr1 Transposase
L6L65_RS24175 (104249) 104249..105109 + 861 WP_000027057.1 Beta-lactamase TEM ARG
L6L65_RS24180 (105259) 105259..105357 - 99 Protein_114 IS1 family transposase -
L6L65_RS24185 (105386) 105386..106696 - 1311 WP_001262765.1 DUF262 domain-containing protein -
L6L65_RS24190 (106981) 106981..107382 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
L6L65_RS24195 (107315) 107315..107572 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
L6L65_RS24200 (107665) 107665..108318 - 654 WP_240724047.1 CPBP family intramembrane metalloprotease -
L6L65_RS24205 (109248) 109248..110105 - 858 WP_021523469.1 incFII family plasmid replication initiator RepA -
L6L65_RS25205 (110098) 110098..110172 - 75 WP_001375168.1 RepA leader peptide Tap -
L6L65_RS24220 (110408) 110408..110665 - 258 WP_000083826.1 replication regulatory protein RepA -
L6L65_RS24225 (110905) 110905..111495 - 591 WP_000766805.1 DUF2726 domain-containing protein -
L6L65_RS24230 (111534) 111534..111743 - 210 WP_001309247.1 hemolysin expression modulator Hha -
L6L65_RS24235 (111789) 111789..112250 - 462 WP_001233842.1 thermonuclease family protein -
L6L65_RS24240 (112495) 112495..112707 - 213 WP_001309245.1 ANR family transcriptional regulator -
L6L65_RS24245 (112836) 112836..113396 - 561 WP_000139321.1 fertility inhibition protein FinO -
L6L65_RS24250 (113499) 113499..114359 - 861 WP_000704523.1 putative protein YcjY VF
L6L65_RS24255 (114418) 114418..114927 - 510 Protein_128 type-F conjugative transfer system pilin acetylase TraX -
L6L65_RS24260 (114983) 114983..116196 + 1214 WP_164965821.1 IS3 family transposase IS629 Transposase
L6L65_RS24265 (116672) 116672..118144 - 1473 WP_000621194.1 ATP-binding protein -
L6L65_RS24270 (118141) 118141..118863 - 723 WP_001057737.1 Transcriptional regulatory protein WalR VF
L6L65_RS24275 (119005) 119005..119604 + 600 WP_001177183.1 cytochrome b/b6 domain-containing protein -
L6L65_RS24280 (119615) 119615..120385 + 771 WP_000712166.1 molybdopterin-dependent oxidoreductase -
L6L65_RS24285 (120415) 120415..120645 + 231 WP_000738204.1 pentapeptide MXKDX repeat protein -
L6L65_RS24290 (120816) 120816..120899 - 84 Protein_135 IS66 family insertion sequence element accessory protein TnpB -
L6L65_RS24295 (120981) 120981..121385 + 405 WP_000839179.1 IS66 family transposase ISEc22 Transposase
L6L65_RS24300 (121382) 121382..121729 + 348 WP_021517412.1 IS66 family transposase ISKpn24 Transposase
L6L65_RS24305 (121778) 121778..123316 + 1539 WP_021517411.1 IS66 family transposase ISEc22 Transposase
L6L65_RS24310 (123379) 123379..124170 - 792 WP_021517410.1 DUF4198 domain-containing protein -
L6L65_RS24315 (124177) 124177..126147 - 1971 WP_021517409.1 Hemin receptor VF
L6L65_RS24320 (126429) 126429..126853 + 425 Protein_141 IS3 family transposase IS2 Transposase
L6L65_RS24325 (127390) 127390..127662 + 273 WP_001322642.1 adhesin biosynthesis transcription regulatory family protein -
L6L65_RS24330 (128108) 128108..128283 + 176 Protein_143 IS3 family transposase -
L6L65_RS24335 (128509) 128509..129678 - 1170 WP_001072359.1 hypothetical protein -
L6L65_RS24340 (130045) 130045..130233 + 189 WP_023150877.1 hypothetical protein -
L6L65_RS24345 (130415) 130415..131112 + 698 WP_231528155.1 IS1 family transposase -
L6L65_RS24350 (131212) 131212..131559 + 348 WP_000142452.1 DUF6404 family protein -
L6L65_RS24355 (131579) 131579..132169 - 591 WP_021517407.1 hypothetical protein -
L6L65_RS24360 (132166) 132166..132426 - 261 WP_021517406.1 hypothetical protein -
L6L65_RS24365 (132525) 132525..133264 + 740 Protein_150 IS3 family transposase IS629 Transposase
L6L65_RS24370 (133937) 133937..135445 + 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
L6L65_RS24375 (135535) 135535..136008 + 474 Protein_152 IS3 family transposase IS629 Transposase
L6L65_RS24380 (136408) 136408..137613 + 1206 WP_001442122.1 Plasmid partition protein A VF
L6L65_RS24385 (137610) 137610..138581 + 972 WP_001233385.1 ParB family protein -
L6L65_RS24390 (138718) 138718..139863 - 1146 Protein_155 translesion error-prone DNA polymerase V subunit UmuC -
L6L65_RS24395 (139989) 139989..140924 + 936 WP_021517404.1 IS91 family transposase ISMno24 Transposase
L6L65_RS24400 (140921) 140921..141832 + 912 WP_021517403.1 hypothetical protein -
L6L65_RS24405 (141909) 141909..143048 + 1140 WP_023150879.1 tyrosine-type recombinase/integrase -
L6L65_RS24415 (144391) 144391..144888 + 498 WP_050575716.1 single-stranded DNA-binding protein -
L6L65_RS24420 (144951) 144951..145184 + 234 WP_021517399.1 DUF905 domain-containing protein -
L6L65_RS24425 (145243) 145243..147201 + 1959 WP_240724049.1 ParB/RepB/Spo0J family partition protein -
L6L65_RS24430 (147256) 147256..147690 + 435 WP_021517397.1 conjugation system SOS inhibitor PsiB -
L6L65_RS24435 (147687) 147687..148406 + 720 Protein_164 plasmid SOS inhibition protein A -
- (148417) 148417..148628 + 212 NuclAT_0 - -
- (148417) 148417..148628 + 212 NuclAT_0 - -
- (148417) 148417..148628 + 212 NuclAT_0 - -
- (148417) 148417..148628 + 212 NuclAT_0 - -
L6L65_RS24440 (148662) 148662..148775 + 114 Protein_165 DUF5431 family protein -
L6L65_RS24445 (148720) 148720..148842 + 123 WP_223195199.1 Hok/Gef family protein -
L6L65_RS24450 (149143) 149143..149410 - 268 Protein_167 hypothetical protein -
L6L65_RS24455 (149465) 149465..149761 + 297 WP_021517395.1 hypothetical protein -
L6L65_RS24460 (149872) 149872..150693 + 822 WP_001234445.1 DUF932 domain-containing protein -
L6L65_RS24465 (150990) 150990..151580 - 591 WP_231528153.1 hypothetical protein VF
L6L65_RS24470 (151915) 151915..152298 + 384 WP_021517393.1 conjugal transfer relaxosome DNA-binding protein TraM -
L6L65_RS24475 (152489) 152489..153142 + 654 WP_021517392.1 hypothetical protein -
L6L65_RS24480 (153267) 153267..153494 + 228 WP_000089265.1 conjugal transfer relaxosome protein TraY -
L6L65_RS24485 (153527) 153527..153889 + 363 WP_021517391.1 type IV conjugative transfer system pilin TraA -
L6L65_RS24490 (153904) 153904..154215 + 312 WP_000012113.1 type IV conjugative transfer system protein TraL -
L6L65_RS24495 (154237) 154237..154803 + 567 WP_000399801.1 type IV conjugative transfer system protein TraE -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance