MGE detailed information
MGE type: Conjugative plasmid MGE length: 154958 bp
Accession: NZ_CP091692 Location: 1..154958 Organism: Escherichia coli strain KMi006 Replicon: plasmid pKMi006_1
Accession: NZ_CP091692 Location: 1..154958 Organism: Escherichia coli strain KMi006 Replicon: plasmid pKMi006_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
L6L65_RS23615 (181) | 181..438 | + | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
L6L65_RS23620 (431) | 431..1174 | + | 744 | WP_021517378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
L6L65_RS23625 (1188) | 1188..1529 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
L6L65_RS23630 (1510) | 1510..1845 | - | 336 | WP_000736414.1 | hypothetical protein | - |
L6L65_RS23635 (1926) | 1926..2210 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
L6L65_RS23640 (2197) | 2197..2742 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
L6L65_RS23645 (2672) | 2672..3020 | + | 349 | Protein_7 | P-type conjugative transfer protein TrbJ | - |
L6L65_RS23650 (3001) | 3001..3393 | + | 393 | WP_021517377.1 | F-type conjugal transfer protein TrbF | - |
L6L65_RS23655 (3380) | 3380..4465 | + | 1086 | Protein_9 | conjugal transfer pilus assembly protein TraH | - |
L6L65_RS23660 (4454) | 4454..7018 | + | 2565 | Protein_10 | conjugal transfer mating-pair stabilization protein TraG | - |
L6L65_RS23665 (7015) | 7015..7524 | + | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
L6L65_RS23670 (7538) | 7538..8269 | + | 732 | WP_012881123.1 | conjugal transfer complement resistance protein TraT | - |
L6L65_RS23675 (8472) | 8472..9209 | + | 738 | WP_012881122.1 | hypothetical protein | - |
L6L65_RS23680 (9260) | 9260..11468 | + | 2209 | Protein_14 | Coupling protein TraD | VF |
L6L65_RS23685 (11468) | 11468..16740 | + | 5273 | Protein_15 | conjugative transfer relaxase/helicase TraI | - |
L6L65_RS23690 (16760) | 16760..16999 | + | 240 | Protein_16 | TraX family protein | - |
L6L65_RS23700 (18394) | 18394..19200 | - | 807 | WP_021517370.1 | site-specific integrase | - |
L6L65_RS23705 (19201) | 19201..19506 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
L6L65_RS23710 (19508) | 19508..19726 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
L6L65_RS23715 (20354) | 20354..20584 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
L6L65_RS23720 (20581) | 20581..20997 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
L6L65_RS23725 (21072) | 21072..22637 | + | 1566 | WP_021517369.1 | AAA family ATPase | - |
L6L65_RS23730 (22622) | 22622..23644 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
L6L65_RS23735 (24341) | 24341..24342 | - | 2 | WP_001743396.1 | IS1-like element IS1A family transposase | - |
L6L65_RS23740 (24950) | 24950..25864 | + | 915 | WP_000949005.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
L6L65_RS23745 (25864) | 25864..26691 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
L6L65_RS23750 (26688) | 26688..27545 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
L6L65_RS23755 (27542) | 27542..28399 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
L6L65_RS23760 (28633) | 28633..30338 | - | 1706 | Protein_30 | Tn3 family transposase | - |
L6L65_RS23765 (30303) | 30303..30632 | + | 330 | Protein_31 | Tn3 family transposase ISEc63 | Transposase |
L6L65_RS23770 (30913) | 30913..31815 | + | 903 | WP_000640873.1 | manganese-dependent inorganic pyrophosphatase | - |
L6L65_RS23775 (31819) | 31819..32178 | + | 360 | WP_021517439.1 | hypothetical protein | - |
L6L65_RS23780 (32184) | 32184..32593 | + | 410 | Protein_34 | IS3 family transposase IS629 | Transposase |
L6L65_RS23785 (32715) | 32715..33737 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
L6L65_RS23790 (33734) | 33734..34516 | + | 783 | WP_077758818.1 | IS21 family transposase IS100kyp | Transposase |
L6L65_RS23795 (34580) | 34580..34882 | + | 303 | Protein_37 | IS3 family transposase IS629 | Transposase |
L6L65_RS23800 (35555) | 35555..37063 | + | 1509 | WP_032150976.1 | group II intron reverse transcriptase/maturase | - |
L6L65_RS23805 (37147) | 37147..37626 | + | 480 | Protein_39 | IS3 family transposase IS629 | Transposase |
L6L65_RS23810 (37666) | 37666..37833 | + | 168 | Protein_40 | phosphopyruvate hydratase | - |
L6L65_RS23815 (38174) | 38174..38554 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
L6L65_RS23825 (40195) | 40195..41388 | - | 1194 | WP_000095526.1 | MFS transporter | - |
L6L65_RS23830 (41524) | 41524..43248 | + | 1725 | WP_063269228.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
L6L65_RS23835 (43249) | 43249..44196 | + | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
L6L65_RS23840 (44196) | 44196..45938 | + | 1743 | WP_021517443.1 | Aerobactin synthase | VF |
L6L65_RS23845 (45935) | 45935..47268 | + | 1334 | Protein_47 | L-lysine N6-monooxygenase | VF |
L6L65_RS23850 (47294) | 47294..49495 | + | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
L6L65_RS23855 (49725) | 49725..50422 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
L6L65_RS23860 (50603) | 50603..51116 | - | 514 | Protein_50 | DUF4113 domain-containing protein | - |
L6L65_RS23865 (51177) | 51177..51281 | - | 105 | Protein_51 | AAA family ATPase | - |
L6L65_RS23870 (51283) | 51283..51606 | - | 324 | Protein_52 | IS21 family transposase IS21 | Transposase |
L6L65_RS23875 (52352) | 52352..53329 | + | 978 | WP_021517434.1 | RepB family plasmid replication initiator protein | - |
L6L65_RS23880 (53608) | 53608..54348 | - | 741 | WP_021517433.1 | IS91 family transposase ISMno23 | Transposase |
L6L65_RS23890 (55540) | 55540..55797 | - | 258 | WP_032143372.1 | P fimbrial regulatory protein KS71A | VF |
L6L65_RS23895 (56599) | 56599..56904 | + | 306 | WP_001545784.1 | Major pilu subunit operon regulatory protein PapB | VF |
L6L65_RS23900 (57132) | 57132..57929 | + | 798 | WP_021517431.1 | Chaperone protein caf1M | VF |
L6L65_RS23905 (57969) | 57969..60551 | + | 2583 | WP_196121232.1 | F1 capsule-anchoring protein | VF |
L6L65_RS23910 (60567) | 60567..61010 | + | 444 | WP_001539577.1 | Protein AfaD | VF |
L6L65_RS23915 (61389) | 61389..61562 | + | 174 | WP_000527471.1 | hypothetical protein | VF |
L6L65_RS23920 (61764) | 61764..62246 | + | 483 | WP_021566292.1 | Dr family adhesin structural subunit DraE | - |
L6L65_RS23930 (64148) | 64148..64375 | - | 228 | Protein_64 | IS21 family transposase ISEc12 | Transposase |
L6L65_RS23935 (64390) | 64390..65931 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
L6L65_RS23940 (66126) | 66126..66275 | + | 150 | Protein_66 | IS1 family transposase | - |
L6L65_RS23945 (66504) | 66504..66902 | + | 399 | WP_240724050.1 | conjugal transfer entry exclusion protein TraS | - |
L6L65_RS23950 (66916) | 66916..67647 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
L6L65_RS23955 (67900) | 67900..68455 | + | 556 | Protein_69 | TraD N-terminal domain-containing protein | - |
L6L65_RS23960 (68519) | 68519..69223 | + | 705 | WP_021517422.1 | IS6 family transposase IS26 | Transposase |
L6L65_RS23965 (69305) | 69305..69475 | + | 171 | Protein_71 | DsbA family protein | - |
L6L65_RS23970 (69465) | 69465..69971 | + | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
L6L65_RS23975 (70208) | 70208..70969 | + | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
L6L65_RS23980 (71316) | 71316..73202 | + | 1887 | WP_001332815.1 | FTR1 family protein | - |
L6L65_RS23985 (73243) | 73243..73770 | + | 528 | WP_000178050.1 | iron transporter | - |
L6L65_RS23990 (73874) | 73874..75253 | + | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
L6L65_RS23995 (75256) | 75256..76539 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
L6L65_RS24000 (76529) | 76529..77659 | + | 1131 | WP_000729219.1 | ABC transporter permease | - |
L6L65_RS24005 (77664) | 77664..78359 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
L6L65_RS24010 (78346) | 78346..78831 | + | 486 | WP_001554949.1 | TlpA disulfide reductase family protein | - |
L6L65_RS24015 (78856) | 78856..79341 | + | 486 | WP_000874189.1 | hypothetical protein | - |
L6L65_RS24020 (79463) | 79463..80095 | + | 633 | Protein_82 | histidine-type phosphatase | - |
L6L65_RS24025 (80245) | 80245..80460 | - | 216 | Protein_83 | IS5 family transposase ISKpn26 | Transposase |
L6L65_RS24030 (80524) | 80524..81228 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
L6L65_RS24035 (81282) | 81282..81539 | - | 258 | Protein_85 | DUF3330 domain-containing protein | - |
L6L65_RS24040 (81742) | 81742..82755 | - | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
L6L65_RS24045 (82900) | 82900..83397 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
L6L65_RS24050 (83509) | 83509..83799 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
L6L65_RS24055 (83805) | 83805..84643 | + | 839 | Protein_89 | Streptomycin 3''-adenylyltransferase | ARG |
L6L65_RS24060 (84760) | 84760..85107 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
L6L65_RS24065 (85101) | 85101..85940 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
L6L65_RS24070 (86068) | 86068..86271 | + | 204 | WP_000376616.1 | hypothetical protein | - |
L6L65_RS24075 (86427) | 86427..87632 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
L6L65_RS24080 (87643) | 87643..87948 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
L6L65_RS24085 (87992) | 87992..88057 | + | 66 | Protein_95 | EAL domain-containing protein | - |
L6L65_RS24090 (88175) | 88175..88939 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
L6L65_RS24095 (89432) | 89432..90016 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
L6L65_RS24100 (90016) | 90016..91254 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
L6L65_RS24105 (91251) | 91251..92165 | - | 915 | WP_023063803.1 | hypothetical protein | ARG |
L6L65_RS24110 (92287) | 92287..92991 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
L6L65_RS24115 (93126) | 93126..93221 | + | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
L6L65_RS24120 (93347) | 93347..94084 | + | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
L6L65_RS24125 (94714) | 94714..95163 | + | 450 | WP_013362817.1 | hypothetical protein | - |
L6L65_RS24130 (95124) | 95124..95465 | + | 342 | WP_023909256.1 | 60 kDa chaperonin 2 | VF |
L6L65_RS24135 (95740) | 95740..97224 | + | 1485 | WP_032152108.1 | IS91 family transposase ISVsa3 | Transposase |
L6L65_RS24140 (97547) | 97547..98251 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
L6L65_RS24145 (98417) | 98417..99277 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
L6L65_RS24150 (99290) | 99290..99832 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
L6L65_RS24155 (100314) | 100314..100505 | - | 192 | WP_000951934.1 | hypothetical protein | - |
L6L65_RS24160 (100529) | 100529..100756 | + | 228 | WP_000248278.1 | hypothetical protein | - |
L6L65_RS24165 (100807) | 100807..101943 | + | 1137 | WP_000080861.1 | DUF3883 domain-containing protein | - |
L6L65_RS24170 (102058) | 102058..103428 | + | 1371 | WP_000971921.1 | IS1182 family transposase ISCfr1 | Transposase |
L6L65_RS24175 (104249) | 104249..105109 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
L6L65_RS24180 (105259) | 105259..105357 | - | 99 | Protein_114 | IS1 family transposase | - |
L6L65_RS24185 (105386) | 105386..106696 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
L6L65_RS24190 (106981) | 106981..107382 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
L6L65_RS24195 (107315) | 107315..107572 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
L6L65_RS24200 (107665) | 107665..108318 | - | 654 | WP_240724047.1 | CPBP family intramembrane metalloprotease | - |
L6L65_RS24205 (109248) | 109248..110105 | - | 858 | WP_021523469.1 | incFII family plasmid replication initiator RepA | - |
L6L65_RS25205 (110098) | 110098..110172 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
L6L65_RS24220 (110408) | 110408..110665 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
L6L65_RS24225 (110905) | 110905..111495 | - | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
L6L65_RS24230 (111534) | 111534..111743 | - | 210 | WP_001309247.1 | hemolysin expression modulator Hha | - |
L6L65_RS24235 (111789) | 111789..112250 | - | 462 | WP_001233842.1 | thermonuclease family protein | - |
L6L65_RS24240 (112495) | 112495..112707 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
L6L65_RS24245 (112836) | 112836..113396 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
L6L65_RS24250 (113499) | 113499..114359 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
L6L65_RS24255 (114418) | 114418..114927 | - | 510 | Protein_128 | type-F conjugative transfer system pilin acetylase TraX | - |
L6L65_RS24260 (114983) | 114983..116196 | + | 1214 | WP_164965821.1 | IS3 family transposase IS629 | Transposase |
L6L65_RS24265 (116672) | 116672..118144 | - | 1473 | WP_000621194.1 | ATP-binding protein | - |
L6L65_RS24270 (118141) | 118141..118863 | - | 723 | WP_001057737.1 | Transcriptional regulatory protein WalR | VF |
L6L65_RS24275 (119005) | 119005..119604 | + | 600 | WP_001177183.1 | cytochrome b/b6 domain-containing protein | - |
L6L65_RS24280 (119615) | 119615..120385 | + | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
L6L65_RS24285 (120415) | 120415..120645 | + | 231 | WP_000738204.1 | pentapeptide MXKDX repeat protein | - |
L6L65_RS24290 (120816) | 120816..120899 | - | 84 | Protein_135 | IS66 family insertion sequence element accessory protein TnpB | - |
L6L65_RS24295 (120981) | 120981..121385 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
L6L65_RS24300 (121382) | 121382..121729 | + | 348 | WP_021517412.1 | IS66 family transposase ISKpn24 | Transposase |
L6L65_RS24305 (121778) | 121778..123316 | + | 1539 | WP_021517411.1 | IS66 family transposase ISEc22 | Transposase |
L6L65_RS24310 (123379) | 123379..124170 | - | 792 | WP_021517410.1 | DUF4198 domain-containing protein | - |
L6L65_RS24315 (124177) | 124177..126147 | - | 1971 | WP_021517409.1 | Hemin receptor | VF |
L6L65_RS24320 (126429) | 126429..126853 | + | 425 | Protein_141 | IS3 family transposase IS2 | Transposase |
L6L65_RS24325 (127390) | 127390..127662 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
L6L65_RS24330 (128108) | 128108..128283 | + | 176 | Protein_143 | IS3 family transposase | - |
L6L65_RS24335 (128509) | 128509..129678 | - | 1170 | WP_001072359.1 | hypothetical protein | - |
L6L65_RS24340 (130045) | 130045..130233 | + | 189 | WP_023150877.1 | hypothetical protein | - |
L6L65_RS24345 (130415) | 130415..131112 | + | 698 | WP_231528155.1 | IS1 family transposase | - |
L6L65_RS24350 (131212) | 131212..131559 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
L6L65_RS24355 (131579) | 131579..132169 | - | 591 | WP_021517407.1 | hypothetical protein | - |
L6L65_RS24360 (132166) | 132166..132426 | - | 261 | WP_021517406.1 | hypothetical protein | - |
L6L65_RS24365 (132525) | 132525..133264 | + | 740 | Protein_150 | IS3 family transposase IS629 | Transposase |
L6L65_RS24370 (133937) | 133937..135445 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
L6L65_RS24375 (135535) | 135535..136008 | + | 474 | Protein_152 | IS3 family transposase IS629 | Transposase |
L6L65_RS24380 (136408) | 136408..137613 | + | 1206 | WP_001442122.1 | Plasmid partition protein A | VF |
L6L65_RS24385 (137610) | 137610..138581 | + | 972 | WP_001233385.1 | ParB family protein | - |
L6L65_RS24390 (138718) | 138718..139863 | - | 1146 | Protein_155 | translesion error-prone DNA polymerase V subunit UmuC | - |
L6L65_RS24395 (139989) | 139989..140924 | + | 936 | WP_021517404.1 | IS91 family transposase ISMno24 | Transposase |
L6L65_RS24400 (140921) | 140921..141832 | + | 912 | WP_021517403.1 | hypothetical protein | - |
L6L65_RS24405 (141909) | 141909..143048 | + | 1140 | WP_023150879.1 | tyrosine-type recombinase/integrase | - |
L6L65_RS24415 (144391) | 144391..144888 | + | 498 | WP_050575716.1 | single-stranded DNA-binding protein | - |
L6L65_RS24420 (144951) | 144951..145184 | + | 234 | WP_021517399.1 | DUF905 domain-containing protein | - |
L6L65_RS24425 (145243) | 145243..147201 | + | 1959 | WP_240724049.1 | ParB/RepB/Spo0J family partition protein | - |
L6L65_RS24430 (147256) | 147256..147690 | + | 435 | WP_021517397.1 | conjugation system SOS inhibitor PsiB | - |
L6L65_RS24435 (147687) | 147687..148406 | + | 720 | Protein_164 | plasmid SOS inhibition protein A | - |
- (148417) | 148417..148628 | + | 212 | NuclAT_0 | - | - |
- (148417) | 148417..148628 | + | 212 | NuclAT_0 | - | - |
- (148417) | 148417..148628 | + | 212 | NuclAT_0 | - | - |
- (148417) | 148417..148628 | + | 212 | NuclAT_0 | - | - |
L6L65_RS24440 (148662) | 148662..148775 | + | 114 | Protein_165 | DUF5431 family protein | - |
L6L65_RS24445 (148720) | 148720..148842 | + | 123 | WP_223195199.1 | Hok/Gef family protein | - |
L6L65_RS24450 (149143) | 149143..149410 | - | 268 | Protein_167 | hypothetical protein | - |
L6L65_RS24455 (149465) | 149465..149761 | + | 297 | WP_021517395.1 | hypothetical protein | - |
L6L65_RS24460 (149872) | 149872..150693 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
L6L65_RS24465 (150990) | 150990..151580 | - | 591 | WP_231528153.1 | hypothetical protein | VF |
L6L65_RS24470 (151915) | 151915..152298 | + | 384 | WP_021517393.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
L6L65_RS24475 (152489) | 152489..153142 | + | 654 | WP_021517392.1 | hypothetical protein | - |
L6L65_RS24480 (153267) | 153267..153494 | + | 228 | WP_000089265.1 | conjugal transfer relaxosome protein TraY | - |
L6L65_RS24485 (153527) | 153527..153889 | + | 363 | WP_021517391.1 | type IV conjugative transfer system pilin TraA | - |
L6L65_RS24490 (153904) | 153904..154215 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
L6L65_RS24495 (154237) | 154237..154803 | + | 567 | WP_000399801.1 | type IV conjugative transfer system protein TraE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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