MGE detailed information
MGE type: Conjugative plasmid MGE length: 113312 bp
Accession: NZ_CP091653 Location: 1..113312 Organism: Escherichia coli strain KMi025 Replicon: plasmid pKMi025_2
Accession: NZ_CP091653 Location: 1..113312 Organism: Escherichia coli strain KMi025 Replicon: plasmid pKMi025_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6L63_RS23340 (53) | 53..289 | + | 237 | WP_240724998.1 | DUF905 domain-containing protein | - |
| L6L63_RS23345 (351) | 351..2309 | + | 1959 | WP_061671612.1 | ParB/RepB/Spo0J family partition protein | - |
| L6L63_RS23350 (2364) | 2364..2798 | + | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| L6L63_RS23355 (2795) | 2795..3514 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| L6L63_RS23360 (3644) | 3644..4819 | + | 1176 | WP_061671611.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| L6L63_RS23365 (5267) | 5267..5767 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| L6L63_RS23370 (6496) | 6496..6930 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| L6L63_RS23375 (7023) | 7023..7289 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| L6L63_RS23380 (7354) | 7354..8244 | + | 891 | WP_000038399.1 | Recombination-promoting nuclease RpnA | VF |
| L6L63_RS23385 (8244) | 8244..8501 | + | 258 | WP_165715391.1 | hypothetical protein | VF |
| L6L63_RS23390 (8532) | 8532..8783 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| L6L63_RS23395 (9364) | 9364..10212 | + | 849 | WP_021513954.1 | DUF4942 domain-containing protein | - |
| L6L63_RS23400 (10298) | 10298..10633 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| L6L63_RS23405 (10867) | 10867..11199 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| L6L63_RS23410 (11210) | 11210..13909 | + | 2700 | WP_001306778.1 | Protein TraI | Relaxase |
| L6L63_RS23415 (13946) | 13946..16237 | - | 2292 | WP_240724999.1 | F-type conjugative transfer protein TrbC | - |
| L6L63_RS23420 (16230) | 16230..17300 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| L6L63_RS23425 (17319) | 17319..18527 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (18707) | 18707..18769 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (18707) | 18707..18769 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (18707) | 18707..18769 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (18707) | 18707..18769 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| L6L63_RS23430 (18819) | 18819..18971 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| L6L63_RS23435 (19043) | 19043..19294 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| L6L63_RS23440 (19773) | 19773..20528 | - | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| L6L63_RS23445 (20545) | 20545..22080 | - | 1536 | WP_045147483.1 | IS21 family transposase ISSso4 | Transposase |
| - (22325) | 22325..22376 | - | 52 | NuclAT_1 | - | - |
| - (22325) | 22325..22376 | - | 52 | NuclAT_1 | - | - |
| - (22325) | 22325..22376 | - | 52 | NuclAT_1 | - | - |
| - (22325) | 22325..22376 | - | 52 | NuclAT_1 | - | - |
| L6L63_RS23450 (22862) | 22862..23038 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| L6L63_RS23455 (23430) | 23430..23639 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| L6L63_RS23460 (23711) | 23711..24373 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| L6L63_RS23465 (24444) | 24444..26612 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| L6L63_RS23470 (26709) | 26709..27293 | - | 585 | WP_001037985.1 | IncI1-type conjugal transfer protein TraX | - |
| L6L63_RS23475 (27322) | 27322..28524 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| L6L63_RS23480 (28491) | 28491..29105 | - | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| L6L63_RS23485 (29105) | 29105..32149 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| L6L63_RS23490 (32239) | 32239..33039 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| L6L63_RS23495 (33023) | 33023..33211 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| L6L63_RS23500 (33275) | 33275..33679 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| L6L63_RS23505 (33730) | 33730..34257 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| L6L63_RS23510 (34257) | 34257..34961 | - | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| L6L63_RS23515 (34961) | 34961..36250 | - | 1290 | WP_033544219.1 | conjugal transfer protein TraO | - |
| L6L63_RS23520 (36253) | 36253..37236 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| L6L63_RS23525 (37247) | 37247..37939 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| L6L63_RS23530 (37936) | 37936..38283 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| L6L63_RS23535 (38301) | 38301..42068 | - | 3768 | WP_006855639.1 | DUF5710 domain-containing protein | - |
| L6L63_RS23540 (42158) | 42158..42400 | - | 243 | WP_240725000.1 | Phospholipase D | VF |
| L6L63_RS23545 (42495) | 42495..43277 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| L6L63_RS23550 (43274) | 43274..44296 | - | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| L6L63_RS23555 (44385) | 44385..44669 | - | 285 | Protein_43 | phospholipase D-like domain-containing protein | - |
| L6L63_RS23560 (44684) | 44684..44974 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| L6L63_RS23565 (44971) | 44971..46119 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| L6L63_RS23570 (46116) | 46116..46934 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| L6L63_RS23575 (46931) | 46931..47389 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| L6L63_RS23580 (47784) | 47784..48368 | - | 585 | WP_061671621.1 | histidine phosphatase family protein | - |
| L6L63_RS23585 (48428) | 48428..49630 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| L6L63_RS23590 (49716) | 49716..50540 | - | 825 | WP_015058912.1 | conjugal transfer protein TraE | - |
| L6L63_RS23595 (50691) | 50691..51845 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| L6L63_RS23600 (52331) | 52331..52579 | + | 249 | WP_095110402.1 | hypothetical protein | - |
| L6L63_RS23605 (53205) | 53205..54308 | - | 1104 | Protein_53 | hypothetical protein | VF |
| L6L63_RS23610 (54296) | 54296..54952 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| L6L63_RS23615 (54937) | 54937..55497 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| L6L63_RS23620 (55507) | 55507..56121 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| L6L63_RS23625 (56138) | 56138..57223 | - | 1086 | WP_001208803.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| L6L63_RS23630 (57236) | 57236..58789 | - | 1554 | WP_000362204.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| L6L63_RS23635 (58800) | 58800..59252 | - | 453 | WP_001247333.1 | hypothetical protein | VF |
| L6L63_RS23640 (59239) | 59239..60534 | - | 1296 | WP_000752776.1 | type 4b pilus protein PilO2 | - |
| L6L63_RS23645 (60527) | 60527..62209 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| L6L63_RS23650 (62223) | 62223..62660 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| L6L63_RS23655 (62660) | 62660..63727 | - | 1068 | WP_021513968.1 | hypothetical protein | VF |
| L6L63_RS23660 (64393) | 64393..65928 | + | 1536 | WP_045147483.1 | IS21 family transposase ISSso4 | Transposase |
| L6L63_RS23665 (65945) | 65945..66700 | + | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| L6L63_RS23670 (67124) | 67124..67378 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| L6L63_RS23675 (67550) | 67550..68233 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| L6L63_RS23680 (68487) | 68487..69020 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| L6L63_RS23685 (69462) | 69462..69749 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| L6L63_RS23690 (69667) | 69667..69897 | - | 231 | WP_228772074.1 | ash family protein | - |
| L6L63_RS23695 (70903) | 70903..71934 | + | 1032 | WP_000907852.1 | plasmid replication initiator RepA | - |
| L6L63_RS23700 (72838) | 72838..73122 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| L6L63_RS23705 (73122) | 73122..73397 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L6L63_RS23710 (73503) | 73503..73706 | + | 204 | Protein_74 | hypothetical protein | - |
| L6L63_RS23715 (73976) | 73976..74242 | - | 267 | WP_000627832.1 | hypothetical protein | - |
| L6L63_RS23720 (74242) | 74242..74736 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| L6L63_RS23725 (74792) | 74792..75394 | - | 603 | WP_061671620.1 | ProQ/FINO family protein | - |
| L6L63_RS23730 (75748) | 75748..77094 | + | 1347 | WP_001132027.1 | protein YagA | - |
| L6L63_RS23735 (77409) | 77409..78950 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| L6L63_RS23740 (78965) | 78965..79711 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| L6L63_RS23745 (79959) | 79959..81839 | + | 1881 | WP_061671619.1 | colicin Ia central receptor-binding domain-containing protein | - |
| L6L63_RS23750 (81857) | 81857..82204 | - | 348 | WP_016232722.1 | colicin E1 family microcin immunity protein | - |
| L6L63_RS23755 (82323) | 82323..82670 | + | 348 | WP_000142441.1 | DUF6404 family protein | - |
| L6L63_RS23760 (82688) | 82688..83278 | - | 591 | WP_000194574.1 | hypothetical protein | - |
| L6L63_RS23765 (83278) | 83278..83535 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| L6L63_RS23770 (84104) | 84104..84517 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| L6L63_RS23775 (84519) | 84519..85298 | + | 780 | WP_001199724.1 | site-specific integrase | - |
| L6L63_RS23780 (85478) | 85478..86122 | + | 645 | WP_001144036.1 | ParA family protein | - |
| L6L63_RS23785 (86209) | 86209..86517 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| L6L63_RS23790 (86931) | 86931..87911 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| L6L63_RS23795 (87904) | 87904..88320 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| L6L63_RS23800 (88322) | 88322..88951 | - | 630 | Protein_92 | DUF4113 domain-containing protein | - |
| L6L63_RS23805 (89003) | 89003..89707 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| L6L63_RS23810 (89773) | 89773..90699 | - | 927 | Protein_94 | IS4 family transposase IS10R | Transposase |
| L6L63_RS23815 (90918) | 90918..91793 | + | 876 | WP_032489598.1 | Beta-lactamase Toho-1 | ARG |
| L6L63_RS23820 (91948) | 91948..92652 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| L6L63_RS23825 (92715) | 92715..93356 | + | 642 | Protein_97 | DUF1281 domain-containing protein | - |
| L6L63_RS23830 (93360) | 93360..93665 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| L6L63_RS23835 (93741) | 93741..94424 | + | 684 | WP_000086160.1 | DNA methylase | - |
| L6L63_RS23840 (94425) | 94425..94646 | + | 222 | WP_021560304.1 | hypothetical protein | - |
| L6L63_RS23845 (94540) | 94540..95093 | + | 554 | Protein_101 | DUF1380 family protein | - |
| L6L63_RS23850 (95139) | 95139..95915 | + | 777 | WP_061671617.1 | hypothetical protein | - |
| L6L63_RS23855 (96326) | 96326..96751 | + | 426 | WP_061671615.1 | antirestriction protein | - |
| L6L63_RS23860 (96798) | 96798..97220 | + | 423 | WP_061671614.1 | DUF1380 family protein | - |
| L6L63_RS23865 (97217) | 97217..97408 | + | 192 | WP_001697954.1 | hypothetical protein | - |
| L6L63_RS23870 (97479) | 97479..97793 | + | 315 | WP_024199621.1 | hypothetical protein | - |
| L6L63_RS23875 (98215) | 98215..98892 | + | 678 | WP_001299364.1 | IS66 family transposase ISCro1 | Transposase |
| L6L63_RS23880 (98892) | 98892..99239 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| L6L63_RS23885 (99259) | 99259..100830 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| L6L63_RS23890 (100884) | 100884..101411 | + | 528 | WP_053264372.1 | single-stranded DNA-binding protein | - |
| L6L63_RS23895 (101570) | 101570..102817 | + | 1248 | WP_000414651.1 | site-specific integrase | - |
| L6L63_RS23900 (102804) | 102804..104342 | + | 1539 | WP_001333349.1 | site-specific integrase | - |
| L6L63_RS23905 (104359) | 104359..106392 | + | 2034 | WP_000807722.1 | hypothetical protein | - |
| L6L63_RS23910 (106385) | 106385..106804 | + | 420 | WP_001062122.1 | hypothetical protein | - |
| L6L63_RS23915 (106880) | 106880..111643 | + | 4764 | WP_000240574.1 | AVAST type 4 anti-phage nuclease Avs4 | - |
| L6L63_RS23920 (112182) | 112182..113003 | - | 822 | WP_001272932.1 | abortive infection system antitoxin AbiGi family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|