MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 87837 bp
Accession: NZ_CP091652 Location: 1798045..1885881 Organism: Escherichia coli strain KMi025 Replicon: chromosome
Accession: NZ_CP091652 Location: 1798045..1885881 Organism: Escherichia coli strain KMi025 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6L63_RS08725 (1793209) | 1793209..1793871 | - | 663 | WP_000836532.1 | PAS domain-containing protein | - |
| L6L63_RS08730 (1794057) | 1794057..1795016 | + | 960 | WP_000765976.1 | sugar phosphate isomerase/epimerase family protein | - |
| L6L63_RS08735 (1795038) | 1795038..1795415 | + | 378 | WP_001389183.1 | RidA family protein | - |
| L6L63_RS08740 (1795430) | 1795430..1796662 | + | 1233 | WP_001389184.1 | MFS transporter | - |
| L6L63_RS08745 (1796927) | 1796927..1797652 | - | 726 | Protein_1711 | transposase | - |
| L6L63_RS08750 (1797683) | 1797683..1798033 | - | 351 | WP_000624710.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| L6L63_RS08755 (1798030) | 1798030..1798449 | - | 420 | WP_000422706.1 | transposase | - |
| L6L63_RS08765 (1800193) | 1800193..1801149 | + | 957 | WP_000301136.1 | NotI family restriction endonuclease | - |
| L6L63_RS08770 (1801130) | 1801130..1802059 | - | 930 | WP_001328257.1 | DNA (cytosine-5-)-methyltransferase | - |
| L6L63_RS08775 (1802251) | 1802251..1802416 | - | 166 | Protein_1717 | integrase | - |
| L6L63_RS08780 (1802499) | 1802499..1802549 | + | 51 | Protein_1718 | IS3 family transposase ISRaq1 | Transposase |
| L6L63_RS08785 (1802577) | 1802577..1802873 | + | 297 | Protein_1719 | transposase | - |
| L6L63_RS08790 (1803020) | 1803020..1804210 | - | 1191 | Protein_1720 | IS3 family transposase | - |
| L6L63_RS08800 (1805202) | 1805202..1806749 | - | 1548 | WP_001294844.1 | hypothetical protein | - |
| L6L63_RS08805 (1806749) | 1806749..1811707 | - | 4959 | WP_000877066.1 | AAA domain-containing protein | - |
| L6L63_RS08810 (1811915) | 1811915..1812070 | + | 156 | Protein_1724 | integrase | - |
| L6L63_RS08815 (1812107) | 1812107..1812721 | - | 615 | Protein_1725 | IS3 family transposase ISEc48 | Transposase |
| L6L63_RS08820 (1812909) | 1812909..1813238 | + | 330 | WP_000042910.1 | IS66 family transposase ISEc49 | Transposase |
| L6L63_RS08825 (1813225) | 1813225..1813617 | + | 393 | WP_000950652.1 | IS66 family transposase ISEc49 | Transposase |
| L6L63_RS08830 (1813624) | 1813624..1814498 | + | 875 | Protein_1728 | IS66 family transposase ISEc49 | Transposase |
| L6L63_RS08835 (1814494) | 1814494..1815303 | - | 810 | Protein_1729 | hypothetical protein | VF |
| L6L63_RS08840 (1815267) | 1815267..1816946 | - | 1680 | Protein_1730 | hypothetical protein | VF |
| L6L63_RS08845 (1816939) | 1816939..1817109 | - | 171 | Protein_1731 | hypothetical protein | - |
| L6L63_RS08850 (1817198) | 1817198..1817698 | - | 501 | WP_001167446.1 | hypothetical protein | - |
| L6L63_RS08855 (1817966) | 1817966..1818196 | - | 231 | WP_001389194.1 | AlpA family transcriptional regulator | - |
| L6L63_RS08860 (1818265) | 1818265..1818825 | - | 561 | WP_000991581.1 | hypothetical protein | - |
| L6L63_RS08865 (1819083) | 1819083..1819649 | - | 567 | WP_001126801.1 | inovirus-type Gp2 protein | - |
| L6L63_RS08870 (1821227) | 1821227..1821931 | + | 705 | WP_001389195.1 | toll/interleukin-1 receptor domain-containing protein | - |
| L6L63_RS08875 (1822355) | 1822355..1823086 | - | 732 | WP_001075482.1 | inovirus Gp2 family protein | - |
| L6L63_RS08880 (1824605) | 1824605..1825735 | - | 1131 | WP_240724996.1 | hypothetical protein | - |
| L6L63_RS08885 (1825920) | 1825920..1826804 | + | 885 | WP_000010402.1 | 50S ribosome-binding GTPase | - |
| L6L63_RS08890 (1827007) | 1827007..1827687 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| L6L63_RS08895 (1827835) | 1827835..1828512 | + | 678 | WP_001097302.1 | hypothetical protein | - |
| L6L63_RS08900 (1828518) | 1828518..1828751 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| L6L63_RS08905 (1828841) | 1828841..1829659 | + | 819 | WP_001175148.1 | DUF932 domain-containing protein | - |
| L6L63_RS08910 (1829741) | 1829741..1830219 | + | 479 | Protein_1744 | antirestriction protein | - |
| L6L63_RS08915 (1830235) | 1830235..1830711 | + | 477 | WP_001366855.1 | RadC family protein | - |
| L6L63_RS08920 (1830774) | 1830774..1830995 | + | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| L6L63_RS08925 (1831075) | 1831075..1831449 | + | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| L6L63_RS08930 (1831496) | 1831496..1831873 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| L6L63_RS08935 (1831870) | 1831870..1832358 | + | 489 | WP_000761676.1 | DUF5983 family protein | - |
| L6L63_RS08940 (1832370) | 1832370..1832567 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| L6L63_RS08945 (1832652) | 1832652..1833518 | + | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| L6L63_RS08950 (1833590) | 1833590..1833853 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| L6L63_RS08955 (1833850) | 1833850..1834176 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| L6L63_RS08960 (1834640) | 1834640..1835902 | + | 1263 | WP_032161224.1 | hypothetical protein ; Integrase | Integrase |
| L6L63_RS08970 (1836886) | 1836886..1837755 | + | 870 | Protein_1756 | HNH endonuclease signature motif containing protein | - |
| L6L63_RS08975 (1837980) | 1837980..1838222 | + | 243 | Protein_1757 | N-acetylneuraminic acid mutarotase | - |
| L6L63_RS08980 (1838310) | 1838310..1839290 | + | 981 | WP_000019446.1 | IS5 family transposase ISKpn26 | Transposase |
| L6L63_RS08985 (1839516) | 1839516..1839713 | - | 198 | WP_001238008.1 | hypothetical protein | - |
| L6L63_RS08990 (1839865) | 1839865..1840562 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| L6L63_RS08995 (1840683) | 1840683..1842542 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| L6L63_RS09000 (1842747) | 1842747..1843613 | + | 867 | WP_001295515.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| L6L63_RS25215 (1843642) | 1843642..1843723 | - | 82 | Protein_1763 | hypothetical protein | - |
| L6L63_RS09005 (1843736) | 1843736..1843984 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| L6L63_RS09010 (1843997) | 1843997..1844338 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| L6L63_RS09015 (1844331) | 1844331..1844819 | - | 489 | WP_032161227.1 | hydrogenase-2 assembly chaperone | - |
| L6L63_RS09020 (1844812) | 1844812..1845306 | - | 495 | WP_001221939.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| L6L63_RS09025 (1845306) | 1845306..1847009 | - | 1704 | WP_000083057.1 | hydrogenase 2 large subunit | - |
| L6L63_RS09030 (1847006) | 1847006..1848184 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| L6L63_RS09035 (1848174) | 1848174..1849160 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| L6L63_RS09040 (1849163) | 1849163..1850281 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| L6L63_RS09045 (1850470) | 1850470..1850757 | - | 288 | WP_001059139.1 | DUF2623 family protein YghW | - |
| L6L63_RS09050 (1850876) | 1850876..1851763 | - | 888 | WP_001424373.1 | YghX family hydrolase | - |
| L6L63_RS09055 (1851920) | 1851920..1852960 | + | 1041 | WP_000262171.1 | L-glyceraldehyde 3-phosphate reductase | - |
| L6L63_RS09060 (1853000) | 1853000..1853494 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| L6L63_RS09065 (1853685) | 1853685..1854569 | + | 885 | WP_000018758.1 | hypothetical protein | VF |
| L6L63_RS09070 (1854841) | 1854841..1855266 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| L6L63_RS09075 (1855273) | 1855273..1856007 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| L6L63_RS09080 (1856259) | 1856259..1857446 | + | 1188 | WP_001320425.1 | cystathionine beta-lyase | - |
| L6L63_RS09085 (1857586) | 1857586..1858245 | + | 660 | WP_000268419.1 | DedA family general envelope maintenance protein YghB | - |
| L6L63_RS09090 (1858285) | 1858285..1859184 | - | 900 | WP_001298382.1 | DNA-binding transcriptional regulator YqhC | - |
| L6L63_RS09095 (1859378) | 1859378..1860541 | + | 1164 | WP_023281484.1 | alcohol dehydrogenase | - |
| L6L63_RS09100 (1860646) | 1860646..1861473 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| L6L63_RS09105 (1861673) | 1861673..1862598 | + | 926 | Protein_1784 | YbjP/YqhG family protein | - |
| L6L63_RS09110 (1862649) | 1862649..1862906 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| L6L63_RS09115 (1862949) | 1862949..1865168 | - | 2220 | WP_000095154.1 | YgiQ family radical SAM protein | - |
| L6L63_RS09120 (1865279) | 1865279..1866691 | - | 1413 | WP_000059388.1 | cell division protein FtsP | - |
| L6L63_RS09125 (1866766) | 1866766..1867503 | - | 738 | WP_000965712.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| L6L63_RS09130 (1867737) | 1867737..1869995 | - | 2259 | WP_049253102.1 | DNA topoisomerase IV subunit A | - |
| L6L63_RS09135 (1870133) | 1870133..1871740 | - | 1608 | WP_001295629.1 | ABC transporter substrate-binding protein | - |
| L6L63_RS09140 (1871873) | 1871873..1872268 | - | 396 | WP_000650107.1 | type II toxin-antitoxin system antitoxin MqsA | Antitoxin Detail |
| L6L63_RS09145 (1872270) | 1872270..1872566 | - | 297 | WP_000415584.1 | type II toxin-antitoxin system toxin MqsR | Toxin Detail |
| L6L63_RS09150 (1872771) | 1872771..1873253 | - | 483 | WP_053272136.1 | GyrI-like domain-containing protein | - |
| L6L63_RS09155 (1873306) | 1873306..1873698 | - | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| L6L63_RS09160 (1873850) | 1873850..1874509 | + | 660 | WP_001221493.1 | hypothetical protein | VF |
| L6L63_RS09165 (1874506) | 1874506..1875855 | + | 1350 | WP_001618857.1 | quorum sensing histidine kinase QseC | - |
| L6L63_RS09170 (1875901) | 1875901..1876233 | - | 333 | WP_000917684.1 | DUF2645 family protein | - |
| L6L63_RS09175 (1876552) | 1876552..1877133 | + | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| L6L63_RS09180 (1877164) | 1877164..1877478 | + | 315 | WP_000958598.1 | putative quinol monooxygenase | - |
| L6L63_RS09185 (1877526) | 1877526..1879418 | - | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| L6L63_RS09190 (1879447) | 1879447..1880028 | - | 582 | WP_000105733.1 | esterase YqiA | - |
| L6L63_RS09195 (1880028) | 1880028..1880855 | - | 828 | WP_000444752.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| L6L63_RS09200 (1880880) | 1880880..1881302 | - | 423 | WP_000833393.1 | DUF1249 family protein | - |
| L6L63_RS09205 (1881303) | 1881303..1881803 | - | 501 | Protein_1804 | ADP-ribose diphosphatase | - |
| L6L63_RS09215 (1882574) | 1882574..1882708 | - | 135 | Protein_1806 | ADP-ribose pyrophosphatase | - |
| L6L63_RS09220 (1882913) | 1882913..1884394 | + | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| L6L63_RS09225 (1884542) | 1884542..1885213 | + | 672 | WP_000831543.1 | DUF1190 family protein | - |
| L6L63_RS09230 (1885219) | 1885219..1886379 | + | 1161 | WP_049253110.1 | glutathionylspermidine synthase family protein | - |
| L6L63_RS09235 (1886417) | 1886417..1887205 | - | 789 | WP_024238463.1 | 4,5-DOPA dioxygenase extradiol | - |
| L6L63_RS09240 (1887348) | 1887348..1888121 | + | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| L6L63_RS09245 (1888179) | 1888179..1888349 | - | 171 | WP_000469266.1 | protein YqiD | - |
| L6L63_RS09250 (1888611) | 1888611..1889264 | - | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| L6L63_RS09255 (1889638) | 1889638..1889928 | + | 291 | WP_001295626.1 | ubiquinone biosynthesis accessory factor UbiK | - |
| L6L63_RS09260 (1890212) | 1890212..1890763 | + | 552 | WP_001272145.1 | fimbrial-like protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|