MGE detailed information
MGE type: Prophage MGE length: 46871 bp
Accession: NZ_CP091560 Location: 2092977..2139847 Organism: Salmonella enterica strain 179 Replicon: chromosome
Accession: NZ_CP091560 Location: 2092977..2139847 Organism: Salmonella enterica strain 179 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INN78_RS10290 () | 2088033..2088485 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| INN78_RS10295 () | 2088515..2089255 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| INN78_RS10300 () | 2089292..2089813 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| INN78_RS10305 () | 2089815..2090414 | - | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| INN78_RS10310 () | 2091041..2091937 | - | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| INN78_RS10315 () | 2092357..2092968 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| INN78_RS10320 () | 2092977..2093987 | + | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| INN78_RS10325 () | 2094066..2094851 | - | 786 | WP_000571508.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| INN78_RS10330 () | 2094848..2095603 | - | 756 | WP_000203014.1 | Zinc import ATP-binding protein ZnuC | VF |
| INN78_RS10335 () | 2095682..2096626 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| INN78_RS10340 () | 2096642..2097961 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| INN78_RS10345 () | 2098078..2099049 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| INN78_RS10350 () | 2099122..2100564 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| INN78_RS10355 () | 2100688..2101557 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| INN78_RS10360 () | 2101899..2103374 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| INN78_RS10365 () | 2103609..2105420 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| INN78_RS10370 () | 2105458..2106099 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| INN78_RS10375 () | 2106199..2107377 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| INN78_RS10380 () | 2107508..2107798 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| INN78_RS10385 () | 2107866..2108219 | + | 354 | WP_001042119.1 | protein YebF | - |
| INN78_RS10390 () | 2108313..2108972 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| INN78_RS10395 () | 2109185..2111236 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| INN78_RS10400 () | 2111271..2111969 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| INN78_RS10405 () | 2111993..2112649 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| INN78_RS10410 () | 2112757..2112987 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| INN78_RS10415 () | 2113125..2113499 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| INN78_RS10420 () | 2113500..2114375 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| INN78_RS10425 () | 2114392..2114745 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2114845..2114990 | - | 146 | - | - | Antitoxin Detail |
| - | 2114885..2114988 | + | 104 | - | - | Toxin Detail |
| INN78_RS10430 () | 2115119..2116042 | - | 924 | Protein_2044 | hypothetical protein ; Integrase | Integrase |
| INN78_RS10435 () | 2116306..2116767 | - | 462 | Protein_2045 | DNA breaking-rejoining protein | - |
| INN78_RS10440 () | 2116756..2116947 | + | 192 | Protein_2046 | glycoside hydrolase family 19 protein | - |
| INN78_RS10445 () | 2117001..2117534 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| INN78_RS10450 () | 2117791..2117958 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| INN78_RS10455 () | 2118023..2118211 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| INN78_RS10460 () | 2118266..2118526 | + | 261 | Protein_2050 | DUF1441 family protein | - |
| INN78_RS10465 () | 2118741..2119085 | + | 345 | Protein_2051 | macro domain-containing protein | - |
| INN78_RS10470 () | 2119095..2119565 | + | 471 | Protein_2052 | tail fiber assembly protein | - |
| INN78_RS10475 () | 2119662..2119862 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| INN78_RS10480 () | 2120252..2120432 | - | 181 | Protein_2054 | IS3 family transposase | - |
| INN78_RS10485 () | 2120432..2120557 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| INN78_RS25715 () | 2121071..2121217 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| INN78_RS10490 () | 2121211..2121378 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| INN78_RS10495 () | 2121705..2122319 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| INN78_RS10500 () | 2122329..2122487 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| INN78_RS10505 () | 2122620..2123534 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| INN78_RS10510 () | 2124847..2125269 | - | 423 | Protein_2061 | hypothetical protein ; Integrase | Integrase |
| INN78_RS10515 () | 2125339..2126533 | + | 1195 | Protein_2062 | IS256 family transposase IS285 | Transposase |
| INN78_RS10520 () | 2126679..2126819 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| INN78_RS10525 () | 2126985..2127254 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| INN78_RS10530 () | 2127624..2128043 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| INN78_RS10535 () | 2128431..2128907 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| INN78_RS10540 () | 2129237..2129632 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| INN78_RS10545 () | 2130315..2131037 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| INN78_RS10550 () | 2131322..2131486 | + | 165 | WP_001134856.1 | membrane protein | - |
| INN78_RS10555 () | 2131710..2132360 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| INN78_RS10560 () | 2132379..2132570 | - | 192 | WP_000457836.1 | YebW family protein | - |
| INN78_RS10565 () | 2132681..2132917 | - | 237 | WP_024131108.1 | YebV family protein | - |
| INN78_RS10570 () | 2133035..2134474 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| INN78_RS10575 () | 2134552..2137185 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| INN78_RS10580 () | 2137154..2138437 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| INN78_RS10585 () | 2138566..2139063 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| INN78_RS10590 () | 2139161..2139847 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| INN78_RS10595 () | 2139867..2141915 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| INN78_RS10600 () | 2142109..2142990 | + | 882 | WP_000984498.1 | protease HtpX | - |
| INN78_RS10605 () | 2143038..2144411 | - | 1374 | WP_000416128.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25947 | NC_016810 | 1910986..1947632 | 0.006 |