MGE detailed information
MGE type: Prophage MGE length: 39594 bp
Accession: NZ_CP091544 Location: 2163862..2203455 Organism: Salmonella enterica strain 1618 Replicon: chromosome
Accession: NZ_CP091544 Location: 2163862..2203455 Organism: Salmonella enterica strain 1618 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L4414_RS10640 () | 2158918..2159370 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| L4414_RS10645 () | 2159400..2160140 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| L4414_RS10650 () | 2160177..2160698 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| L4414_RS10655 () | 2160700..2161299 | - | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| L4414_RS10660 () | 2161926..2162822 | - | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| L4414_RS10665 () | 2163242..2163853 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| L4414_RS10670 () | 2163862..2164872 | + | 1011 | WP_000568508.1 | hypothetical protein | VF |
| L4414_RS10675 () | 2164951..2165736 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| L4414_RS10680 () | 2165733..2166488 | - | 756 | WP_000203014.1 | Fatty acid oxidation complex subunit alpha | VF |
| L4414_RS10685 () | 2166567..2167511 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| L4414_RS10690 () | 2167527..2168846 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| L4414_RS10695 () | 2168963..2169934 | + | 972 | WP_000448401.1 | DNA topoisomerase 1 | VF |
| L4414_RS10700 () | 2170007..2171449 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| L4414_RS10705 () | 2171573..2172442 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| L4414_RS10710 () | 2172784..2174259 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| L4414_RS10715 () | 2174494..2176305 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| L4414_RS10720 () | 2176343..2176984 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| L4414_RS10725 () | 2177084..2178262 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| L4414_RS10730 () | 2178393..2178683 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| L4414_RS10735 () | 2178751..2179104 | + | 354 | WP_001042119.1 | protein YebF | - |
| L4414_RS10740 () | 2179198..2179857 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| L4414_RS10745 () | 2180070..2182121 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| L4414_RS10750 () | 2182156..2182854 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| L4414_RS10755 () | 2182878..2183534 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| L4414_RS10760 () | 2183642..2183872 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| L4414_RS10765 () | 2184010..2184384 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| L4414_RS10770 () | 2184385..2185260 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| L4414_RS10775 () | 2185277..2185630 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2185730..2185875 | - | 146 | - | - | Antitoxin Detail |
| - | 2185770..2185873 | + | 104 | - | - | Toxin Detail |
| L4414_RS10780 () | 2186004..2186927 | - | 924 | Protein_2115 | Na(+)-translocating NADH-quinone reductase subunit D ; Integrase | Integrase |
| L4414_RS10785 () | 2187191..2187652 | - | 462 | Protein_2116 | DNA breaking-rejoining protein | - |
| L4414_RS10790 () | 2187641..2187832 | + | 192 | Protein_2117 | glycoside hydrolase family 19 protein | - |
| L4414_RS10795 () | 2187886..2188419 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| L4414_RS10800 () | 2188676..2188843 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| L4414_RS10805 () | 2188908..2189096 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| L4414_RS10810 () | 2189151..2189411 | + | 261 | Protein_2121 | DUF1441 family protein | - |
| L4414_RS10815 () | 2189626..2189970 | + | 345 | Protein_2122 | macro domain-containing protein | - |
| L4414_RS10820 () | 2189980..2190450 | + | 471 | Protein_2123 | tail fiber assembly protein | - |
| L4414_RS10825 () | 2190547..2190747 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| L4414_RS10830 () | 2191137..2191317 | - | 181 | Protein_2125 | IS3 family transposase | - |
| L4414_RS10835 () | 2191317..2191442 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| L4414_RS25465 () | 2191956..2192102 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| L4414_RS10840 () | 2192096..2192263 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| L4414_RS10845 () | 2192590..2193204 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| L4414_RS10850 () | 2193214..2193372 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| L4414_RS10855 () | 2193505..2194419 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| L4414_RS10860 () | 2195732..2196154 | - | 423 | Protein_2132 | hypothetical protein ; Integrase | Integrase |
| L4414_RS10865 () | 2196224..2197418 | + | 1195 | Protein_2133 | IS256 family transposase IS285 | Transposase |
| L4414_RS10870 () | 2197564..2197704 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| L4414_RS10875 () | 2197870..2198139 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| L4414_RS10880 () | 2198509..2198928 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| L4414_RS10885 () | 2199316..2199792 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| L4414_RS10890 () | 2200122..2200517 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| L4414_RS10895 () | 2201200..2201922 | + | 723 | WP_000182072.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| L4414_RS10900 () | 2202207..2202371 | + | 165 | WP_001134856.1 | membrane protein | - |
| L4414_RS10905 () | 2202595..2203245 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| L4414_RS10910 () | 2203264..2203455 | - | 192 | WP_000457836.1 | YebW family protein | - |
| L4414_RS10915 () | 2203566..2203802 | - | 237 | WP_024131108.1 | YebV family protein | - |
| L4414_RS10920 () | 2203920..2205359 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| L4414_RS10925 () | 2205437..2208070 | - | 2634 | WP_249001089.1 | PqiB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25947 | NC_016810 | 1910986..1947632 | 0.002 |