MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP091542 Location: 2483463..2495548 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S58L2 Replicon: chromosome
Accession: NZ_CP091542 Location: 2483463..2495548 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S58L2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L5Z53_RS12310 (2479384) | 2479384..2480586 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| L5Z53_RS12315 (2480599) | 2480599..2482050 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| L5Z53_RS12320 (2482194) | 2482194..2483201 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| L5Z53_RS12325 (2483460) | 2483460..2484926 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| L5Z53_RS12330 (2485734) | 2485734..2486448 | + | 715 | Protein_2413 | helix-turn-helix domain-containing protein | - |
| L5Z53_RS12335 (2486504) | 2486504..2487412 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| L5Z53_RS12340 (2487555) | 2487555..2487887 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| L5Z53_RS12345 (2487877) | 2487877..2488092 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| L5Z53_RS12350 (2488244) | 2488244..2488492 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| L5Z53_RS12355 (2488482) | 2488482..2488766 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L5Z53_RS12360 (2488937) | 2488937..2489326 | + | 390 | WP_000194089.1 | RidA family protein | - |
| L5Z53_RS12365 (2489378) | 2489378..2490457 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| L5Z53_RS12370 (2490650) | 2490650..2491138 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| L5Z53_RS12375 (2491183) | 2491183..2492691 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| L5Z53_RS12380 (2492681) | 2492681..2493922 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| L5Z53_RS12385 (2493992) | 2493992..2495548 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| L5Z53_RS12390 (2495725) | 2495725..2497011 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| L5Z53_RS12395 (2496986) | 2496986..2498011 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| L5Z53_RS12400 (2498070) | 2498070..2498861 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| L5Z53_RS12405 (2498907) | 2498907..2499998 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |