MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP091540 Location: 2483407..2495492 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S46L1 Replicon: chromosome
Accession: NZ_CP091540 Location: 2483407..2495492 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S46L1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L5Z03_RS12300 (2479328) | 2479328..2480530 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| L5Z03_RS12305 (2480543) | 2480543..2481994 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| L5Z03_RS12310 (2482138) | 2482138..2483145 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| L5Z03_RS12315 (2483404) | 2483404..2484870 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| L5Z03_RS12320 (2485678) | 2485678..2486392 | + | 715 | Protein_2413 | helix-turn-helix domain-containing protein | - |
| L5Z03_RS12325 (2486448) | 2486448..2487356 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| L5Z03_RS12330 (2487499) | 2487499..2487831 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| L5Z03_RS12335 (2487821) | 2487821..2488036 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| L5Z03_RS12340 (2488188) | 2488188..2488436 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| L5Z03_RS12345 (2488426) | 2488426..2488710 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L5Z03_RS12350 (2488881) | 2488881..2489270 | + | 390 | WP_000194089.1 | RidA family protein | - |
| L5Z03_RS12355 (2489322) | 2489322..2490401 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| L5Z03_RS12360 (2490594) | 2490594..2491082 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| L5Z03_RS12365 (2491127) | 2491127..2492635 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| L5Z03_RS12370 (2492625) | 2492625..2493866 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| L5Z03_RS12375 (2493936) | 2493936..2495492 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| L5Z03_RS12380 (2495669) | 2495669..2496955 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| L5Z03_RS12385 (2496930) | 2496930..2497955 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| L5Z03_RS12390 (2498014) | 2498014..2498805 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| L5Z03_RS12395 (2498851) | 2498851..2499942 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |