MGE detailed information
MGE type: Genomic_island MGE length: 24672 bp
Accession: NZ_CP091427 Location: 837597..862268 Organism: Escherichia coli strain 1000C-3 Replicon: chromosome
Accession: NZ_CP091427 Location: 837597..862268 Organism: Escherichia coli strain 1000C-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L3Z43_RS03955 (835179) | 835179..835757 | + | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| L3Z43_RS03960 (835963) | 835963..836730 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| L3Z43_RS03965 (836701) | 836701..837441 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| L3Z43_RS03970 (837597) | 837597..837875 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| L3Z43_RS03975 (837878) | 837878..838138 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| L3Z43_RS03980 (838348) | 838348..839097 | + | 750 | WP_000056849.1 | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase | VF |
| L3Z43_RS03985 (839273) | 839273..839770 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| L3Z43_RS03990 (839994) | 839994..841706 | - | 1713 | Protein_773 | hypothetical protein | VF |
| L3Z43_RS03995 (841678) | 841678..842463 | + | 786 | WP_000207552.1 | hypothetical protein | VF |
| L3Z43_RS04000 (842534) | 842534..843589 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| L3Z43_RS04005 (843641) | 843641..843934 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| L3Z43_RS04010 (843937) | 843937..844335 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| L3Z43_RS04015 (844345) | 844345..844797 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| L3Z43_RS04020 (845115) | 845115..845321 | + | 207 | Protein_779 | RtcB family protein | - |
| L3Z43_RS04025 (845317) | 845317..845838 | + | 522 | Protein_780 | peptide chain release factor H | - |
| L3Z43_RS04030 (845895) | 845895..847352 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| L3Z43_RS04035 (847613) | 847613..848071 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (848667) | 848667..848747 | + | 81 | NuclAT_11 | - | - |
| - (848667) | 848667..848747 | + | 81 | NuclAT_11 | - | - |
| - (848667) | 848667..848747 | + | 81 | NuclAT_11 | - | - |
| - (848667) | 848667..848747 | + | 81 | NuclAT_11 | - | - |
| L3Z43_RS04040 (848163) | 848163..849407 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| L3Z43_RS04045 (849465) | 849465..849866 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| L3Z43_RS04050 (849905) | 849905..850960 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| L3Z43_RS04055 (851248) | 851248..852351 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| L3Z43_RS04060 (852363) | 852363..853616 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| L3Z43_RS04070 (854132) | 854132..854713 | + | 582 | WP_001310565.1 | hypothetical protein | - |
| L3Z43_RS04075 (854800) | 854800..856431 | - | 1632 | WP_001310566.1 | hypothetical protein | - |
| L3Z43_RS04080 (857124) | 857124..857351 | + | 228 | WP_000270169.1 | AlpA family phage regulatory protein | - |
| L3Z43_RS04085 (857563) | 857563..857712 | + | 150 | WP_001333414.1 | DUF3987 domain-containing protein | - |
| L3Z43_RS04090 (857925) | 857925..859358 | + | 1434 | WP_042047126.1 | YfjI family protein | - |
| L3Z43_RS04095 (860217) | 860217..860780 | + | 564 | WP_000282099.1 | inovirus-type Gp2 protein | - |
| L3Z43_RS04100 (861106) | 861106..862440 | - | 1335 | Protein_794 | Error-prone DNA polymerase | VF |
| L3Z43_RS04105 (862934) | 862934..863053 | - | 120 | Protein_795 | IS481 family transposase | - |
| L3Z43_RS04110 (863132) | 863132..863362 | - | 231 | Protein_796 | IS4/IS5 family transposase | - |
| L3Z43_RS04115 (863506) | 863506..864615 | - | 1110 | WP_016243364.1 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | - |
| L3Z43_RS04120 (864972) | 864972..866204 | + | 1233 | WP_000742442.1 | maltodextrin ABC transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|