MGE detailed information
MGE type: Prophage MGE length: 54417 bp
Accession: NZ_CP091412 Location: 477058..531474 Organism: Staphylococcus aureus strain ATR-20003 Replicon: chromosome
Accession: NZ_CP091412 Location: 477058..531474 Organism: Staphylococcus aureus strain ATR-20003 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L3I92_RS02390 (472184) | 472184..472900 | - | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
| L3I92_RS02395 (472919) | 472919..474211 | - | 1293 | WP_001657119.1 | GHKL domain-containing protein | - |
| L3I92_RS02400 (474236) | 474236..474376 | - | 141 | WP_001093929.1 | cyclic lactone autoinducer peptide | - |
| L3I92_RS02405 (474373) | 474373..474942 | - | 570 | WP_001105708.1 | accessory gene regulator AgrB | - |
| L3I92_RS13950 (475177) | 475177..475311 | + | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| L3I92_RS02415 (475912) | 475912..476697 | - | 786 | WP_000867944.1 | carbon-nitrogen family hydrolase | - |
| L3I92_RS02420 (477058) | 477058..477684 | - | 627 | WP_000522375.1 | nitroreductase family protein | - |
| L3I92_RS02425 (477881) | 477881..479023 | + | 1143 | WP_064277201.1 | SdrH family protein | - |
| L3I92_RS02430 (479048) | 479048..479791 | - | 744 | WP_000197627.1 | CPBP family intramembrane metalloprotease MroQ | - |
| L3I92_RS02435 (479966) | 479966..480250 | + | 285 | WP_000917289.1 | co-chaperone GroES | - |
| L3I92_RS02440 (480326) | 480326..481942 | + | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| L3I92_RS02445 (482474) | 482474..483802 | - | 1329 | WP_223200608.1 | TrkH family potassium uptake protein | - |
| L3I92_RS02450 (484177) | 484177..485400 | - | 1224 | WP_049295812.1 | ArgE/DapE family deacylase | - |
| L3I92_RS02455 (485831) | 485831..486886 | + | 1056 | WP_000791399.1 | putative leukocidin-like protein 2 | VF |
| L3I92_RS02460 (486908) | 486908..487927 | + | 1020 | WP_237269218.1 | putative leukocidin-like protein 1 | VF |
| L3I92_RS02465 (488184) | 488184..489014 | - | 831 | Protein_478 | Phospholipase C | VF |
| L3I92_RS02470 (489238) | 489238..490367 | + | 1130 | WP_098686295.1 | IS3 family transposase IS655 | Transposase |
| L3I92_RS02475 (490385) | 490385..491329 | - | 945 | Protein_480 | hypothetical protein ; Integrase | Integrase |
| L3I92_RS02480 (491388) | 491388..491852 | - | 465 | WP_000825947.1 | hypothetical protein | - |
| L3I92_RS02485 (491952) | 491952..492134 | - | 183 | WP_000705248.1 | hypothetical protein | - |
| L3I92_RS02490 (492338) | 492338..492679 | - | 342 | WP_000591749.1 | hypothetical protein | - |
| L3I92_RS02495 (492685) | 492685..493617 | - | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| L3I92_RS02500 (493633) | 493633..494346 | - | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| L3I92_RS02505 (494309) | 494309..494482 | + | 174 | WP_001801500.1 | hypothetical protein | - |
| L3I92_RS02510 (494479) | 494479..494760 | + | 282 | WP_000854074.1 | helix-turn-helix transcriptional regulator | - |
| L3I92_RS02515 (494757) | 494757..494972 | + | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| L3I92_RS02520 (494961) | 494961..495290 | - | 330 | WP_000128907.1 | hypothetical protein | - |
| L3I92_RS02525 (495341) | 495341..496093 | + | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| L3I92_RS02530 (496109) | 496109..496306 | + | 198 | WP_001148862.1 | hypothetical protein | - |
| L3I92_RS02535 (496293) | 496293..496673 | - | 381 | WP_000762519.1 | DUF2513 domain-containing protein | - |
| L3I92_RS02540 (496728) | 496728..497051 | + | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| L3I92_RS02545 (497048) | 497048..497209 | + | 162 | WP_000048129.1 | DUF1270 family protein | - |
| L3I92_RS02550 (497304) | 497304..497606 | + | 303 | WP_000165371.1 | DUF2482 family protein | - |
| L3I92_RS02555 (497611) | 497611..497871 | + | 261 | WP_000291510.1 | DUF1108 family protein | - |
| L3I92_RS02560 (497880) | 497880..498143 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| L3I92_RS02565 (498152) | 498152..500095 | + | 1944 | WP_000700555.1 | AAA family ATPase | - |
| L3I92_RS02570 (500097) | 500097..501017 | + | 921 | WP_000138475.1 | recombinase RecT | - |
| L3I92_RS02575 (501098) | 501098..501715 | + | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| L3I92_RS02580 (501716) | 501716..502186 | + | 471 | WP_000610648.1 | single-stranded DNA-binding protein | - |
| L3I92_RS02585 (502216) | 502216..503109 | + | 894 | WP_000148321.1 | DnaD domain-containing protein | - |
| L3I92_RS02590 (503116) | 503116..503334 | + | 219 | WP_000338530.1 | hypothetical protein | - |
| L3I92_RS02595 (503343) | 503343..503747 | + | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| L3I92_RS02600 (503760) | 503760..504128 | + | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| L3I92_RS02605 (504132) | 504132..504374 | + | 243 | WP_000131370.1 | SAV1978 family virulence-associated passenger protein | - |
| L3I92_RS02610 (504389) | 504389..504643 | + | 255 | WP_001065097.1 | DUF1024 family protein | - |
| L3I92_RS02615 (504630) | 504630..504800 | + | 171 | WP_000714403.1 | hypothetical protein | - |
| L3I92_RS02620 (504793) | 504793..505329 | + | 537 | WP_001066447.1 | dUTP diphosphatase | - |
| L3I92_RS02625 (505366) | 505366..505611 | + | 246 | WP_001282074.1 | hypothetical protein | - |
| L3I92_RS02630 (505608) | 505608..505814 | + | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| L3I92_RS02635 (505811) | 505811..506197 | + | 387 | WP_000592207.1 | hypothetical protein | - |
| L3I92_RS02640 (506194) | 506194..506343 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| L3I92_RS02645 (506343) | 506343..506543 | + | 201 | WP_001622114.1 | DUF1514 family protein | - |
| L3I92_RS02650 (506571) | 506571..506987 | + | 417 | WP_000590122.1 | hypothetical protein | - |
| L3I92_RS02655 (507219) | 507219..507518 | + | 300 | WP_000988336.1 | HNH endonuclease | - |
| L3I92_RS02660 (507649) | 507649..507993 | + | 345 | WP_000402904.1 | hypothetical protein | - |
| L3I92_RS02665 (507990) | 507990..509651 | + | 1662 | WP_000625088.1 | terminase large subunit | - |
| L3I92_RS02670 (509667) | 509667..510854 | + | 1188 | WP_000025274.1 | phage portal protein | - |
| L3I92_RS02675 (510838) | 510838..511575 | + | 738 | WP_000642728.1 | Clp protease ClpP | - |
| L3I92_RS02680 (511599) | 511599..512744 | + | 1146 | WP_000154559.1 | phage major capsid protein | - |
| L3I92_RS02685 (512764) | 512764..513048 | + | 285 | WP_000238236.1 | hypothetical protein | - |
| L3I92_RS02690 (513038) | 513038..513322 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| L3I92_RS02695 (513306) | 513306..513668 | + | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| L3I92_RS02700 (513665) | 513665..514069 | + | 405 | WP_000114227.1 | HK97 gp10 family phage protein | - |
| L3I92_RS02705 (514066) | 514066..514473 | + | 408 | WP_000565498.1 | hypothetical protein | - |
| L3I92_RS02710 (514474) | 514474..515118 | + | 645 | WP_000268733.1 | phage tail protein | - |
| L3I92_RS02715 (515154) | 515154..515384 | + | 231 | Protein_528 | Ig-like domain-containing protein | - |
| L3I92_RS02720 (515434) | 515434..515784 | + | 351 | WP_001096355.1 | hypothetical protein | - |
| L3I92_RS02725 (515835) | 515835..515972 | + | 138 | WP_001549167.1 | hypothetical protein | - |
| L3I92_RS02730 (516029) | 516029..520558 | + | 4530 | WP_049296035.1 | phage tail tape measure protein | - |
| L3I92_RS02735 (520555) | 520555..522039 | + | 1485 | WP_000567408.1 | phage tail family protein | - |
| L3I92_RS02740 (522055) | 522055..525840 | + | 3786 | WP_237269210.1 | phage tail spike protein | - |
| L3I92_RS02745 (525830) | 525830..525973 | + | 144 | WP_031783159.1 | hypothetical protein | - |
| L3I92_RS02750 (526029) | 526029..526316 | + | 288 | WP_001040254.1 | hypothetical protein | - |
| L3I92_RS02755 (526374) | 526374..526670 | + | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| L3I92_RS02760 (526820) | 526820..526996 | + | 177 | WP_011447039.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| - (526988) | 526988..527127 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (526988) | 526988..527127 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (526988) | 526988..527127 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (526988) | 526988..527127 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| L3I92_RS02765 (527049) | 527049..527156 | - | 108 | WP_031790389.1 | hypothetical protein | - |
| L3I92_RS02770 (527208) | 527208..527462 | + | 255 | WP_000611512.1 | phage holin | - |
| L3I92_RS02775 (527474) | 527474..528229 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| L3I92_RS02780 (528420) | 528420..528911 | + | 492 | WP_000919350.1 | Staphylokinase | VF |
| L3I92_RS02785 (529561) | 529561..529896 | + | 336 | Protein_542 | SH3 domain-containing protein | - |
| L3I92_RS02790 (529991) | 529991..530440 | - | 450 | WP_000727649.1 | Chemotaxis inhibitory protein | VF |
| L3I92_RS02795 (531124) | 531124..531474 | + | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| L3I92_RS02800 (531527) | 531527..531787 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| L3I92_RS02805 (532098) | 532098..532277 | - | 180 | WP_000669789.1 | hypothetical protein | - |
| L3I92_RS02810 (532649) | 532649..532846 | - | 198 | WP_000239617.1 | phospholipase | - |
| L3I92_RS02815 (533235) | 533235..535304 | + | 2070 | WP_049296037.1 | extracellular adherence protein Eap/Map | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|