MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 71760 bp
Accession: NZ_CP091146 Location: 1..71760 Organism: Pseudomonas avellanae strain NCPPB 3491 Replicon: plasmid p3NCPPB3491
Accession: NZ_CP091146 Location: 1..71760 Organism: Pseudomonas avellanae strain NCPPB 3491 Replicon: plasmid p3NCPPB3491
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2Y00_RS29370 (L2Y00_29370) | 1..1314 | + | 1314 | WP_249740320.1 | replication initiation protein | - |
| L2Y00_RS29375 (L2Y00_29375) | 1474..1890 | + | 417 | WP_005619498.1 | hypothetical protein | - |
| L2Y00_RS29380 (L2Y00_29380) | 1926..2156 | + | 231 | WP_058886566.1 | hypothetical protein | - |
| L2Y00_RS29385 (L2Y00_29385) | 2153..2494 | + | 342 | WP_249740321.1 | hypothetical protein | - |
| L2Y00_RS29390 (L2Y00_29390) | 2629..3825 | - | 1197 | WP_249740322.1 | IS91 family transposase ISPsy3 | Transposase |
| L2Y00_RS29395 (L2Y00_29395) | 3891..4118 | + | 228 | Protein_5 | DUF4113 domain-containing protein | - |
| L2Y00_RS29400 (L2Y00_29400) | 4218..4538 | + | 321 | WP_032616419.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| L2Y00_RS29405 (L2Y00_29405) | 4535..5005 | + | 471 | WP_024421059.1 | putative addiction module antidote protein | - |
| L2Y00_RS29410 (L2Y00_29410) | 5104..6630 | - | 1527 | WP_024421476.1 | IS66 family transposase ISPpu19 | Transposase |
| L2Y00_RS29415 (L2Y00_29415) | 6692..7027 | - | 336 | WP_024421477.1 | IS66 family transposase ISPpu19 | Transposase |
| L2Y00_RS29420 (L2Y00_29420) | 7024..7356 | - | 333 | WP_005614101.1 | transposase | - |
| L2Y00_RS29425 (L2Y00_29425) | 7464..7658 | + | 195 | WP_122349172.1 | hypothetical protein | - |
| L2Y00_RS29430 (L2Y00_29430) | 7853..8521 | - | 669 | WP_024421540.1 | hypothetical protein | - |
| L2Y00_RS29435 (L2Y00_29435) | 8704..9387 | - | 684 | Protein_13 | Effector protein hopAB1 | - |
| L2Y00_RS29440 (L2Y00_29440) | 9987..10685 | + | 699 | WP_005734862.1 | Protein virC1 | VF |
| L2Y00_RS29445 (L2Y00_29445) | 10678..11001 | + | 324 | WP_007253135.1 | hypothetical protein | - |
| L2Y00_RS29450 (L2Y00_29450) | 11528..12277 | - | 750 | WP_122212308.1 | IS5 family transposase ISPa67 | Transposase |
| L2Y00_RS29455 (L2Y00_29455) | 12840..13085 | + | 246 | WP_080892027.1 | PapB/FocB family fimbrial expression transcriptional regulator | - |
| L2Y00_RS29460 (L2Y00_29460) | 13170..13433 | + | 264 | WP_024421357.1 | hypothetical protein | - |
| L2Y00_RS29465 (L2Y00_29465) | 13493..13732 | + | 240 | WP_044423057.1 | hypothetical protein | - |
| L2Y00_RS29470 (L2Y00_29470) | 13743..13922 | + | 180 | WP_122234405.1 | zinc ribbon domain-containing protein | - |
| L2Y00_RS29475 (L2Y00_29475) | 13934..14125 | + | 192 | WP_024421143.1 | hypothetical protein | - |
| L2Y00_RS29480 (L2Y00_29480) | 14141..14320 | + | 180 | WP_029768531.1 | hypothetical protein | - |
| L2Y00_RS29940 | 14334..14456 | + | 123 | WP_283780421.1 | hypothetical protein | - |
| L2Y00_RS29485 (L2Y00_29485) | 14432..14725 | + | 294 | WP_147477515.1 | hypothetical protein | - |
| L2Y00_RS29490 (L2Y00_29490) | 14768..14983 | + | 216 | WP_024420033.1 | hypothetical protein | - |
| L2Y00_RS29495 (L2Y00_29495) | 15039..15263 | + | 225 | WP_024421145.1 | carbon storage regulator | - |
| L2Y00_RS29500 (L2Y00_29500) | 15299..15712 | + | 414 | WP_005620870.1 | TraR/DksA family transcriptional regulator | - |
| L2Y00_RS29505 (L2Y00_29505) | 15750..15971 | + | 222 | WP_005620871.1 | hypothetical protein | - |
| L2Y00_RS29510 (L2Y00_29510) | 16297..16917 | - | 621 | WP_005747119.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| L2Y00_RS29515 (L2Y00_29515) | 17125..17463 | + | 339 | WP_024420290.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| L2Y00_RS29520 (L2Y00_29520) | 17463..17750 | + | 288 | WP_005622028.1 | XRE family transcriptional regulator | - |
| L2Y00_RS29525 (L2Y00_29525) | 17812..18228 | + | 417 | WP_024420291.1 | TrfB-related DNA-binding protein | - |
| L2Y00_RS29530 (L2Y00_29530) | 18687..19064 | + | 378 | WP_007247501.1 | hypothetical protein | - |
| L2Y00_RS29535 (L2Y00_29535) | 19111..19947 | + | 837 | WP_024420292.1 | DUF932 domain-containing protein | - |
| L2Y00_RS29540 (L2Y00_29540) | 20196..21710 | + | 1515 | WP_249740200.1 | IS21 family transposase ISPsy40 | Transposase |
| L2Y00_RS29545 (L2Y00_29545) | 21731..22486 | + | 756 | WP_151318986.1 | IS21 family transposase ISPsy40 | Transposase |
| L2Y00_RS29550 (L2Y00_29550) | 22666..22866 | + | 201 | WP_004666908.1 | hypothetical protein | - |
| L2Y00_RS29555 (L2Y00_29555) | 22933..23211 | - | 279 | WP_004661031.1 | mobilization protein | - |
| L2Y00_RS29560 (L2Y00_29560) | 23255..23536 | - | 282 | WP_011106972.1 | hypothetical protein | - |
| L2Y00_RS29565 (L2Y00_29565) | 23509..23853 | - | 345 | WP_005622131.1 | hypothetical protein | - |
| L2Y00_RS29570 (L2Y00_29570) | 24113..24442 | + | 330 | WP_003344297.1 | plasmid mobilization protein MobA | - |
| L2Y00_RS29575 (L2Y00_29575) | 24453..26408 | + | 1956 | WP_024421296.1 | Protein TraI | Relaxase |
| L2Y00_RS29580 (L2Y00_29580) | 26669..27085 | - | 417 | WP_005622134.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| L2Y00_RS29585 (L2Y00_29585) | 27082..27336 | - | 255 | WP_024421297.1 | plasmid stabilization protein | Antitoxin Detail |
| L2Y00_RS29590 (L2Y00_29590) | 27908..28531 | - | 624 | WP_005740414.1 | glycoside hydrolase family 25 protein | - |
| L2Y00_RS29595 (L2Y00_29595) | 29065..30246 | - | 1182 | WP_024421298.1 | glycoside hydrolase family 10 protein | - |
| L2Y00_RS29600 (L2Y00_29600) | 30331..31626 | - | 1296 | WP_024420278.1 | glycoside hydrolase family 68 protein | - |
| L2Y00_RS29605 (L2Y00_29605) | 31638..31823 | - | 186 | WP_024420279.1 | Com family DNA-binding transcriptional regulator | - |
| L2Y00_RS29610 (L2Y00_29610) | 31752..32117 | + | 366 | WP_249740317.1 | hypothetical protein | - |
| L2Y00_RS29615 (L2Y00_29615) | 32317..34266 | - | 1950 | WP_024420280.1 | putative signaling protein | VF |
| L2Y00_RS29620 (L2Y00_29620) | 34864..35469 | + | 606 | Protein_51 | MFS transporter | - |
| L2Y00_RS29625 (L2Y00_29625) | 35570..36124 | + | 555 | Protein_52 | MFS transporter | - |
| L2Y00_RS29630 (L2Y00_29630) | 36295..36480 | + | 186 | WP_003344336.1 | hypothetical protein | - |
| L2Y00_RS29635 (L2Y00_29635) | 36502..36885 | - | 384 | WP_003344338.1 | helix-turn-helix transcriptional regulator | - |
| L2Y00_RS29640 (L2Y00_29640) | 37099..37632 | + | 534 | WP_024420740.1 | transcription termination/antitermination NusG family protein | - |
| L2Y00_RS29645 (L2Y00_29645) | 37874..38623 | + | 750 | WP_122212308.1 | IS5 family transposase ISPa67 | Transposase |
| L2Y00_RS29650 (L2Y00_29650) | 38686..38895 | + | 210 | WP_005622143.1 | hypothetical protein | - |
| L2Y00_RS29655 (L2Y00_29655) | 39188..39679 | + | 492 | WP_005622145.1 | hypothetical protein | VF |
| L2Y00_RS29660 (L2Y00_29660) | 39716..40189 | + | 474 | WP_005622147.1 | DotD/TraH family lipoprotein | - |
| L2Y00_RS29665 (L2Y00_29665) | 40186..40986 | + | 801 | WP_007247253.1 | hypothetical protein | VF |
| L2Y00_RS29670 (L2Y00_29670) | 40983..42161 | + | 1179 | WP_024421245.1 | Twitching mobility protein | VF |
| L2Y00_RS29675 (L2Y00_29675) | 42193..42426 | + | 234 | WP_004644386.1 | hypothetical protein | - |
| L2Y00_RS29680 (L2Y00_29680) | 42464..42712 | + | 249 | WP_024419793.1 | hypothetical protein | - |
| L2Y00_RS29685 (L2Y00_29685) | 42705..42917 | + | 213 | WP_147469975.1 | hypothetical protein | - |
| L2Y00_RS29690 (L2Y00_29690) | 42914..43465 | + | 552 | WP_005622153.1 | Phospholipase D | VF |
| L2Y00_RS29695 (L2Y00_29695) | 43556..43747 | + | 192 | WP_229687595.1 | hypothetical protein | - |
| L2Y00_RS29700 (L2Y00_29700) | 43776..44063 | + | 288 | WP_024419794.1 | hypothetical protein | - |
| L2Y00_RS29705 (L2Y00_29705) | 44106..44303 | + | 198 | WP_024421244.1 | hypothetical protein | - |
| L2Y00_RS29710 (L2Y00_29710) | 44364..45113 | + | 750 | WP_122212308.1 | IS5 family transposase ISPa67 | Transposase |
| L2Y00_RS29715 (L2Y00_29715) | 45499..49416 | + | 3918 | WP_229687569.1 | DUF5710 domain-containing protein | - |
| L2Y00_RS29720 (L2Y00_29720) | 49442..49795 | + | 354 | WP_005622158.1 | conjugal transfer protein | - |
| L2Y00_RS29725 (L2Y00_29725) | 49792..50499 | + | 708 | WP_003344369.1 | DotI/IcmL family type IV secretion protein | - |
| L2Y00_RS29730 (L2Y00_29730) | 50556..51614 | + | 1059 | WP_005622162.1 | hypothetical protein | VF |
| L2Y00_RS29735 (L2Y00_29735) | 51620..52978 | + | 1359 | WP_024420289.1 | conjugal transfer protein TraO | - |
| L2Y00_RS29740 (L2Y00_29740) | 52975..53685 | + | 711 | WP_024421511.1 | conjugal transfer protein TraP | - |
| L2Y00_RS29745 (L2Y00_29745) | 53694..54236 | + | 543 | WP_005622166.1 | conjugal transfer protein TraQ | - |
| L2Y00_RS29750 (L2Y00_29750) | 54312..54707 | + | 396 | WP_005622168.1 | hypothetical protein | - |
| L2Y00_RS29755 (L2Y00_29755) | 54751..55026 | - | 276 | WP_005622170.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| L2Y00_RS29760 (L2Y00_29760) | 55004..55204 | - | 201 | WP_005622172.1 | hypothetical protein | - |
| L2Y00_RS29765 (L2Y00_29765) | 55389..56000 | + | 612 | WP_005622174.1 | hypothetical protein | - |
| L2Y00_RS29770 (L2Y00_29770) | 55975..59031 | + | 3057 | WP_024421512.1 | conjugal transfer protein | - |
| L2Y00_RS29775 (L2Y00_29775) | 59055..59291 | + | 237 | WP_005622183.1 | hypothetical protein | - |
| L2Y00_RS29780 (L2Y00_29780) | 59313..59702 | + | 390 | WP_005740376.1 | hypothetical protein | - |
| L2Y00_RS29785 (L2Y00_29785) | 59714..60928 | + | 1215 | WP_005622185.1 | conjugal transfer protein TraW | - |
| L2Y00_RS29790 (L2Y00_29790) | 60918..61520 | + | 603 | WP_024421513.1 | conjugal transfer protein TraX | - |
| L2Y00_RS29795 (L2Y00_29795) | 61549..63564 | + | 2016 | WP_024421514.1 | DotA/TraY family protein | - |
| L2Y00_RS29800 (L2Y00_29800) | 63633..64382 | + | 750 | WP_122212308.1 | IS5 family transposase ISPa67 | Transposase |
| L2Y00_RS29805 (L2Y00_29805) | 64598..65248 | + | 651 | WP_002556019.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| L2Y00_RS29810 (L2Y00_29810) | 65341..66543 | + | 1203 | WP_005622046.1 | hypothetical protein | - |
| L2Y00_RS29815 (L2Y00_29815) | 66533..66910 | - | 378 | WP_003344395.1 | PIN domain-containing protein | Toxin Detail |
| L2Y00_RS29820 (L2Y00_29820) | 66907..67107 | - | 201 | WP_005622049.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| L2Y00_RS29825 (L2Y00_29825) | 67199..68284 | + | 1086 | WP_024420283.1 | thioredoxin fold domain-containing protein | - |
| L2Y00_RS29830 (L2Y00_29830) | 68271..70559 | + | 2289 | WP_249740319.1 | F-type conjugative transfer protein TrbC | - |
| L2Y00_RS29835 (L2Y00_29835) | 70637..71065 | + | 429 | WP_024421070.1 | GntR family transcriptional regulator | - |
| L2Y00_RS29840 (L2Y00_29840) | 71144..71362 | + | 219 | WP_122349173.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|