MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 87243 bp
Accession: NZ_CP091145 Location: 1..87243 Organism: Pseudomonas avellanae strain NCPPB 3491 Replicon: plasmid p2NCPPB3491
Accession: NZ_CP091145 Location: 1..87243 Organism: Pseudomonas avellanae strain NCPPB 3491 Replicon: plasmid p2NCPPB3491
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2Y00_RS28905 (L2Y00_28905) | 1..1314 | + | 1314 | WP_249740316.1 | replication initiation protein | - |
| L2Y00_RS28910 (L2Y00_28910) | 1538..1825 | + | 288 | WP_005622242.1 | HU family DNA-binding protein | - |
| L2Y00_RS28915 (L2Y00_28915) | 2053..2751 | + | 699 | WP_024421138.1 | GNAT family N-acetyltransferase | - |
| L2Y00_RS28920 (L2Y00_28920) | 3092..3487 | + | 396 | WP_005622000.1 | CesT family type III secretion system chaperone | - |
| L2Y00_RS28925 (L2Y00_28925) | 3500..4342 | + | 843 | WP_005622002.1 | AvrPphF family type III effector | - |
| L2Y00_RS28930 (L2Y00_28930) | 4531..4788 | + | 258 | WP_169338194.1 | hypothetical protein | - |
| L2Y00_RS28935 (L2Y00_28935) | 5408..6541 | - | 1134 | WP_005622093.1 | MFS transporter | - |
| L2Y00_RS28940 (L2Y00_28940) | 6588..7226 | - | 639 | WP_024419752.1 | hypothetical protein | - |
| L2Y00_RS28945 (L2Y00_28945) | 8083..8766 | - | 684 | Protein_8 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| L2Y00_RS28950 (L2Y00_28950) | 8935..9738 | - | 804 | WP_003417182.1 | IS21 family transposase ISPsy20 | Transposase |
| L2Y00_RS28955 (L2Y00_28955) | 9731..11230 | - | 1500 | WP_249740206.1 | IS21 family transposase ISPsy20 | Transposase |
| L2Y00_RS28960 (L2Y00_28960) | 11619..13355 | + | 1737 | WP_232002779.1 | N-6 DNA methylase | - |
| L2Y00_RS28965 (L2Y00_28965) | 13355..14434 | + | 1080 | WP_005620862.1 | BsuBI/PstI family type II restriction endonuclease | - |
| L2Y00_RS28970 (L2Y00_28970) | 14615..17503 | - | 2889 | WP_249740312.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| L2Y00_RS28975 (L2Y00_28975) | 17597..18202 | + | 606 | WP_024421557.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| L2Y00_RS28980 (L2Y00_28980) | 18622..18765 | + | 144 | WP_169338193.1 | hypothetical protein | - |
| L2Y00_RS28985 (L2Y00_28985) | 19019..19384 | + | 366 | WP_024420428.1 | hypothetical protein | - |
| L2Y00_RS28990 (L2Y00_28990) | 19395..20060 | + | 666 | WP_024421426.1 | competence protein CoiA family protein | - |
| L2Y00_RS28995 (L2Y00_28995) | 20124..20309 | + | 186 | WP_024421427.1 | hypothetical protein | - |
| L2Y00_RS29000 (L2Y00_29000) | 20413..21252 | + | 840 | WP_024421428.1 | abortive infection family protein | - |
| L2Y00_RS29005 (L2Y00_29005) | 21684..22700 | + | 1017 | WP_005614760.1 | IS30 family transposase ISPsy38 | Transposase |
| L2Y00_RS29010 (L2Y00_29010) | 22755..22910 | + | 156 | WP_154655506.1 | hypothetical protein | - |
| L2Y00_RS29015 (L2Y00_29015) | 23086..24585 | + | 1500 | WP_249740206.1 | IS21 family transposase ISPsy20 | Transposase |
| L2Y00_RS29020 (L2Y00_29020) | 24578..25282 | + | 705 | Protein_23 | IS21 family transposase ISPsy20 | Transposase |
| L2Y00_RS29025 (L2Y00_29025) | 25501..25733 | + | 233 | Protein_24 | recombinase family protein | - |
| L2Y00_RS29030 (L2Y00_29030) | 25783..26439 | - | 657 | WP_005614735.1 | YopT-type cysteine protease domain-containing protein | - |
| L2Y00_RS29035 (L2Y00_29035) | 26864..27424 | - | 561 | WP_024421155.1 | hypothetical protein | - |
| L2Y00_RS29040 (L2Y00_29040) | 27414..29051 | - | 1638 | WP_202803580.1 | IS481 family transposase ISAzs36 | Transposase |
| L2Y00_RS29045 (L2Y00_29045) | 29056..29616 | - | 561 | WP_005782565.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| L2Y00_RS29050 (L2Y00_29050) | 29719..30786 | + | 1068 | WP_024419981.1 | IS630 family transposase ISPsy32 | Transposase |
| L2Y00_RS29055 (L2Y00_29055) | 31210..32742 | - | 1533 | WP_024420042.1 | XopB/HopD1 family type III secretion system effector | - |
| L2Y00_RS29060 (L2Y00_29060) | 33195..33944 | - | 750 | WP_122212308.1 | IS5 family transposase ISPa67 | Transposase |
| L2Y00_RS29065 (L2Y00_29065) | 34610..35767 | - | 1158 | WP_005614725.1 | putative DNA binding domain-containing protein | - |
| L2Y00_RS29070 (L2Y00_29070) | 35749..38415 | - | 2667 | WP_005614723.1 | ABC transporter | - |
| L2Y00_RS29075 (L2Y00_29075) | 38525..38959 | - | 435 | WP_024420044.1 | hypothetical protein | Relaxase |
| L2Y00_RS29080 (L2Y00_29080) | 38962..39234 | - | 273 | WP_024421153.1 | hypothetical protein | - |
| L2Y00_RS29085 (L2Y00_29085) | 39331..39966 | - | 636 | WP_024421154.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| L2Y00_RS29090 (L2Y00_29090) | 40213..41193 | + | 981 | Protein_37 | Y-family DNA polymerase | - |
| L2Y00_RS29095 (L2Y00_29095) | 41308..41613 | + | 306 | WP_229687586.1 | DUF4113 domain-containing protein | - |
| L2Y00_RS29100 (L2Y00_29100) | 41647..42066 | - | 420 | WP_229687585.1 | hypothetical protein | - |
| L2Y00_RS29105 (L2Y00_29105) | 42117..43121 | - | 1005 | WP_005615818.1 | ParB/RepB/Spo0J family partition protein | - |
| L2Y00_RS29110 (L2Y00_29110) | 43222..44349 | - | 1128 | WP_005615816.1 | ParA family protein | - |
| L2Y00_RS29115 (L2Y00_29115) | 44480..44755 | - | 276 | WP_024421179.1 | IS66 family transposase ISPpu19 | Transposase |
| L2Y00_RS29120 (L2Y00_29120) | 44960..47557 | - | 2598 | WP_005615814.1 | hypothetical protein | - |
| L2Y00_RS29125 (L2Y00_29125) | 48028..49056 | - | 1029 | Protein_44 | IS91 family transposase | - |
| L2Y00_RS29130 (L2Y00_29130) | 49037..49318 | - | 282 | WP_147477469.1 | hypothetical protein | - |
| L2Y00_RS29135 (L2Y00_29135) | 49388..50002 | + | 615 | WP_005615813.1 | SOS response-associated peptidase family protein | - |
| L2Y00_RS29140 (L2Y00_29140) | 50275..51030 | - | 756 | WP_151318986.1 | IS21 family transposase ISPsy40 | Transposase |
| L2Y00_RS29145 (L2Y00_29145) | 51051..52565 | - | 1515 | WP_249740200.1 | IS21 family transposase ISPsy40 | Transposase |
| L2Y00_RS29150 (L2Y00_29150) | 52818..53393 | + | 576 | WP_003348590.1 | PBECR2 nuclease fold domain-containing protein | - |
| L2Y00_RS29155 (L2Y00_29155) | 54007..54270 | + | 264 | WP_010212495.1 | hypothetical protein | - |
| L2Y00_RS29160 (L2Y00_29160) | 54724..54867 | - | 144 | Protein_51 | IS91 family transposase | - |
| L2Y00_RS29165 (L2Y00_29165) | 55028..56008 | + | 981 | WP_024421123.1 | IS5 family transposase ISPa41 | Transposase |
| L2Y00_RS29170 (L2Y00_29170) | 56201..57004 | - | 804 | WP_029241171.1 | IS21 family transposase ISPsy20 | Transposase |
| L2Y00_RS29175 (L2Y00_29175) | 56997..58437 | - | 1441 | Protein_54 | IS21 family transposase ISPsy20 | Transposase |
| L2Y00_RS29180 (L2Y00_29180) | 58321..58740 | + | 420 | WP_249740318.1 | hypothetical protein | - |
| L2Y00_RS29185 (L2Y00_29185) | 58838..59392 | + | 555 | WP_024421467.1 | hypothetical protein | - |
| L2Y00_RS29190 (L2Y00_29190) | 59443..59673 | + | 231 | WP_019332195.1 | carbon storage regulator | - |
| L2Y00_RS29195 (L2Y00_29195) | 59791..60411 | - | 621 | WP_005747119.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| L2Y00_RS29200 (L2Y00_29200) | 60665..61651 | - | 987 | WP_005622125.1 | DUF4238 domain-containing protein | - |
| L2Y00_RS29205 (L2Y00_29205) | 61916..62248 | + | 333 | WP_010216246.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| L2Y00_RS29210 (L2Y00_29210) | 62250..62534 | + | 285 | WP_024421129.1 | NadS family protein | - |
| L2Y00_RS29215 (L2Y00_29215) | 62687..63103 | + | 417 | WP_024421128.1 | TrfB-related DNA-binding protein | - |
| L2Y00_RS29220 (L2Y00_29220) | 63563..63940 | + | 378 | WP_024421127.1 | hypothetical protein | - |
| L2Y00_RS29225 (L2Y00_29225) | 63987..64823 | + | 837 | WP_044423062.1 | DUF932 domain-containing protein | - |
| L2Y00_RS29230 (L2Y00_29230) | 64891..65091 | + | 201 | WP_004666908.1 | hypothetical protein | - |
| L2Y00_RS29235 (L2Y00_29235) | 65158..65436 | - | 279 | WP_004661031.1 | mobilization protein | - |
| L2Y00_RS29240 (L2Y00_29240) | 65480..65761 | - | 282 | WP_011106972.1 | hypothetical protein | - |
| L2Y00_RS29245 (L2Y00_29245) | 65734..66078 | - | 345 | WP_005622131.1 | hypothetical protein | - |
| L2Y00_RS29250 (L2Y00_29250) | 66338..66667 | + | 330 | WP_003344297.1 | plasmid mobilization protein MobA | - |
| L2Y00_RS29255 (L2Y00_29255) | 66678..68633 | + | 1956 | WP_024421296.1 | Protein TraI | Relaxase |
| L2Y00_RS29260 (L2Y00_29260) | 68894..69310 | - | 417 | WP_005622134.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| L2Y00_RS29265 (L2Y00_29265) | 69307..69561 | - | 255 | WP_024421297.1 | plasmid stabilization protein | Antitoxin Detail |
| L2Y00_RS29270 (L2Y00_29270) | 70133..70756 | - | 624 | WP_005740414.1 | glycoside hydrolase family 25 protein | - |
| L2Y00_RS29275 (L2Y00_29275) | 71290..72471 | - | 1182 | WP_024421298.1 | glycoside hydrolase family 10 protein | - |
| L2Y00_RS29280 (L2Y00_29280) | 72556..73851 | - | 1296 | WP_024420278.1 | glycoside hydrolase family 68 protein | - |
| L2Y00_RS29285 (L2Y00_29285) | 73863..74048 | - | 186 | WP_024420279.1 | Com family DNA-binding transcriptional regulator | - |
| L2Y00_RS29290 (L2Y00_29290) | 73977..74342 | + | 366 | WP_249740317.1 | hypothetical protein | - |
| L2Y00_RS29295 (L2Y00_29295) | 74542..76491 | - | 1950 | WP_024420280.1 | putative signaling protein | VF |
| L2Y00_RS29300 (L2Y00_29300) | 77089..77694 | + | 606 | Protein_79 | MFS transporter | - |
| L2Y00_RS29305 (L2Y00_29305) | 77795..78349 | + | 555 | Protein_80 | MFS transporter | - |
| L2Y00_RS29310 (L2Y00_29310) | 78520..78705 | + | 186 | WP_003344336.1 | hypothetical protein | - |
| L2Y00_RS29315 (L2Y00_29315) | 78727..79110 | - | 384 | WP_003344338.1 | helix-turn-helix transcriptional regulator | - |
| L2Y00_RS29320 (L2Y00_29320) | 79324..79857 | + | 534 | WP_024420740.1 | transcription termination/antitermination NusG family protein | - |
| L2Y00_RS29325 (L2Y00_29325) | 80099..80848 | + | 750 | WP_122212308.1 | IS5 family transposase ISPa67 | Transposase |
| L2Y00_RS29330 (L2Y00_29330) | 80863..81240 | - | 378 | WP_003344395.1 | PIN domain-containing protein | Toxin Detail |
| L2Y00_RS29335 (L2Y00_29335) | 81237..81437 | - | 201 | WP_005622049.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| L2Y00_RS29340 (L2Y00_29340) | 81529..82614 | + | 1086 | WP_024420283.1 | thioredoxin fold domain-containing protein | - |
| L2Y00_RS29345 (L2Y00_29345) | 82601..84889 | + | 2289 | WP_249740315.1 | F-type conjugative transfer protein TrbC | - |
| L2Y00_RS29350 (L2Y00_29350) | 84917..85339 | + | 423 | WP_024421149.1 | hypothetical protein | - |
| L2Y00_RS29355 (L2Y00_29355) | 85360..85923 | + | 564 | WP_005622240.1 | hypothetical protein | - |
| L2Y00_RS29360 (L2Y00_29360) | 86111..86539 | + | 429 | WP_024421148.1 | GntR family transcriptional regulator | - |
| L2Y00_RS29365 (L2Y00_29365) | 86618..86845 | + | 228 | WP_024421147.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|