MGE detailed information
MGE type: Prophage MGE length: 67569 bp
Accession: NZ_CP091066 Location: 1444029..1511597 Organism: Staphylococcus aureus strain UMCG579 Replicon: chromosome
Accession: NZ_CP091066 Location: 1444029..1511597 Organism: Staphylococcus aureus strain UMCG579 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1O91_RS06680 (1439454) | 1439454..1440407 | - | 954 | WP_054190648.1 | helix-turn-helix domain-containing protein | - |
| L1O91_RS06685 (1440515) | 1440515..1440763 | + | 249 | WP_001151997.1 | ferredoxin | - |
| L1O91_RS06690 (1440869) | 1440869..1441414 | - | 546 | WP_054190647.1 | ECF transporter S component | - |
| L1O91_RS06695 (1442061) | 1442061..1442975 | - | 915 | WP_054191869.1 | DUF1672 domain-containing protein | - |
| L1O91_RS06700 (1443033) | 1443033..1443938 | - | 906 | WP_054190756.1 | DUF1672 domain-containing protein | - |
| L1O91_RS06705 (1444029) | 1444029..1444214 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| L1O91_RS06710 (1444463) | 1444463..1445446 | - | 984 | WP_024937002.1 | Leucotoxin LukDv | VF |
| L1O91_RS06715 (1445442) | 1445442..1446380 | - | 939 | WP_000239545.1 | Gamma-hemolysin component C | VF |
| L1O91_RS06720 (1446770) | 1446770..1448224 | - | 1455 | WP_000909220.1 | N-acetylmuramoyl-L-alanine amidase | - |
| L1O91_RS06725 (1448235) | 1448235..1448537 | - | 303 | WP_000339146.1 | phage holin | - |
| L1O91_RS06730 (1448673) | 1448673..1448972 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| L1O91_RS06735 (1449018) | 1449018..1449182 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| L1O91_RS06740 (1449175) | 1449175..1449564 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| L1O91_RS06745 (1449564) | 1449564..1451030 | - | 1467 | WP_054189545.1 | BppU family phage baseplate upper protein | - |
| L1O91_RS06750 (1451030) | 1451030..1452940 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| L1O91_RS06755 (1452956) | 1452956..1453246 | - | 291 | WP_054189544.1 | hypothetical protein | - |
| L1O91_RS06760 (1453246) | 1453246..1454829 | - | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| L1O91_RS06765 (1454838) | 1454838..1455662 | - | 825 | WP_020444679.1 | phage tail family protein | - |
| L1O91_RS06770 (1455662) | 1455662..1461862 | - | 6201 | WP_077519955.1 | phage tail tape measure protein | - |
| L1O91_RS06775 (1461876) | 1461876..1462034 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| L1O91_RS06780 (1462076) | 1462076..1462426 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| L1O91_RS06785 (1462484) | 1462484..1462939 | - | 456 | WP_000169127.1 | Ig-like domain-containing protein | - |
| L1O91_RS06790 (1463031) | 1463031..1463672 | - | 642 | WP_000807536.1 | phage tail protein | - |
| L1O91_RS06795 (1463954) | 1463954..1464190 | + | 237 | WP_001159903.1 | hypothetical protein | - |
| L1O91_RS06800 (1464197) | 1464197..1466149 | + | 1953 | WP_000163792.1 | hypothetical protein | - |
| L1O91_RS06805 (1466221) | 1466221..1466718 | - | 498 | WP_000868795.1 | Dihydrofolate reductase | ARG |
| L1O91_RS06810 (1466993) | 1466993..1467388 | - | 396 | WP_031902212.1 | hypothetical protein | - |
| L1O91_RS06815 (1467389) | 1467389..1467790 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| L1O91_RS06820 (1467787) | 1467787..1468119 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| L1O91_RS06825 (1468131) | 1468131..1468409 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| L1O91_RS06830 (1468478) | 1468478..1469641 | - | 1164 | WP_001142735.1 | phage major capsid protein | - |
| L1O91_RS06835 (1469653) | 1469653..1470426 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| L1O91_RS06840 (1470410) | 1470410..1471648 | - | 1239 | WP_001100665.1 | phage portal protein | - |
| L1O91_RS06845 (1471653) | 1471653..1473344 | - | 1692 | WP_050974185.1 | terminase large subunit | - |
| L1O91_RS06850 (1473334) | 1473334..1473639 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| L1O91_RS06855 (1473766) | 1473766..1474080 | - | 315 | WP_000160686.1 | HNH endonuclease | - |
| L1O91_RS06860 (1474237) | 1474237..1474674 | - | 438 | WP_000528512.1 | transcriptional regulator | - |
| L1O91_RS06865 (1474687) | 1474687..1476054 | - | 1368 | WP_077519958.1 | DEAD/DEAH box helicase | - |
| L1O91_RS06870 (1476035) | 1476035..1476325 | - | 291 | WP_001548892.1 | VRR-NUC domain-containing protein | - |
| L1O91_RS06875 (1476459) | 1476459..1476557 | + | 99 | WP_001801650.1 | hypothetical protein | - |
| L1O91_RS06880 (1476666) | 1476666..1479113 | - | 2448 | WP_054189542.1 | virulence-associated E family protein | - |
| L1O91_RS06885 (1479165) | 1479165..1479365 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| L1O91_RS06890 (1479433) | 1479433..1479585 | - | 153 | WP_000237866.1 | transcriptional activator RinB | - |
| L1O91_RS06895 (1479588) | 1479588..1479788 | - | 201 | WP_001125015.1 | hypothetical protein | - |
| L1O91_RS06900 (1479763) | 1479763..1479951 | - | 189 | WP_000195789.1 | DUF1381 domain-containing protein | - |
| L1O91_RS06905 (1479968) | 1479968..1480141 | - | 174 | WP_001209219.1 | hypothetical protein | - |
| L1O91_RS06910 (1480178) | 1480178..1480705 | - | 528 | WP_054189541.1 | dUTP pyrophosphatase | - |
| L1O91_RS06915 (1480698) | 1480698..1480940 | - | 243 | WP_000700108.1 | hypothetical protein | - |
| L1O91_RS06920 (1480930) | 1480930..1481166 | - | 237 | WP_000370296.1 | DUF1024 family protein | - |
| L1O91_RS06925 (1481159) | 1481159..1481326 | - | 168 | WP_001813803.1 | hypothetical protein | - |
| L1O91_RS06930 (1481338) | 1481338..1481586 | - | 249 | WP_000178883.1 | phi PVL orf 51-like protein | - |
| L1O91_RS06935 (1481595) | 1481595..1481795 | - | 201 | WP_000235381.1 | hypothetical protein | - |
| L1O91_RS06940 (1481798) | 1481798..1482055 | - | 258 | WP_000111488.1 | DUF3310 domain-containing protein | - |
| L1O91_RS06945 (1482055) | 1482055..1482456 | - | 402 | WP_000113981.1 | PVL family protein | - |
| L1O91_RS06950 (1482456) | 1482456..1482641 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| L1O91_RS06955 (1482654) | 1482654..1484606 | - | 1953 | WP_001796208.1 | DNA polymerase | - |
| L1O91_RS06960 (1484675) | 1484675..1485232 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| L1O91_RS06965 (1485258) | 1485258..1486424 | - | 1167 | WP_000762547.1 | DUF2800 domain-containing protein | - |
| L1O91_RS06970 (1486421) | 1486421..1486783 | - | 363 | WP_000985984.1 | hypothetical protein | - |
| L1O91_RS06975 (1486798) | 1486798..1487121 | - | 324 | WP_257552433.1 | TrmB family transcriptional regulator | - |
| L1O91_RS06980 (1487200) | 1487200..1487361 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| L1O91_RS06985 (1487374) | 1487374..1487637 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| L1O91_RS06990 (1487662) | 1487662..1487877 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| L1O91_RS06995 (1487932) | 1487932..1488297 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| L1O91_RS07000 (1488266) | 1488266..1488511 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| L1O91_RS07005 (1488567) | 1488567..1488776 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| L1O91_RS07010 (1488766) | 1488766..1488909 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| L1O91_RS07015 (1488938) | 1488938..1489714 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| L1O91_RS07020 (1489728) | 1489728..1489964 | - | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| L1O91_RS07025 (1490116) | 1490116..1490430 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| L1O91_RS07030 (1490443) | 1490443..1490904 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| L1O91_RS07035 (1490922) | 1490922..1491356 | + | 435 | WP_000755718.1 | hypothetical protein | - |
| L1O91_RS07040 (1491385) | 1491385..1491780 | + | 396 | WP_000449655.1 | hypothetical protein | - |
| L1O91_RS07045 (1491870) | 1491870..1492016 | + | 147 | WP_001795334.1 | hypothetical protein | - |
| L1O91_RS07050 (1492013) | 1492013..1492627 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| L1O91_RS07055 (1492753) | 1492753..1493958 | + | 1206 | WP_000264751.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| L1O91_RS07060 (1494001) | 1494001..1496028 | - | 2028 | WP_054189540.1 | hypothetical protein | - |
| L1O91_RS07065 (1496040) | 1496040..1496948 | - | 909 | WP_061745606.1 | DUF1672 domain-containing protein | - |
| L1O91_RS07070 (1497200) | 1497200..1498951 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| L1O91_RS07075 (1498932) | 1498932..1499657 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| L1O91_RS07080 (1499790) | 1499790..1500527 | - | 738 | WP_054190645.1 | pseudouridine synthase | - |
| L1O91_RS07085 (1500520) | 1500520..1501062 | - | 543 | WP_054190644.1 | SMC-Scp complex subunit ScpB | - |
| L1O91_RS07090 (1501055) | 1501055..1501786 | - | 732 | WP_054190643.1 | segregation/condensation protein A | - |
| L1O91_RS07095 (1501878) | 1501878..1502384 | + | 507 | WP_001183425.1 | DUF309 domain-containing protein | - |
| L1O91_RS07100 (1502462) | 1502462..1503349 | - | 888 | WP_054190642.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| L1O91_RS07105 (1503398) | 1503398..1503847 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| L1O91_RS07110 (1503952) | 1503952..1504494 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| L1O91_RS07115 (1504576) | 1504576..1505484 | + | 909 | WP_054190641.1 | aldo/keto reductase | - |
| L1O91_RS07120 (1505697) | 1505697..1505945 | - | 249 | WP_054190640.1 | hypothetical protein | - |
| L1O91_RS07125 (1505961) | 1505961..1506716 | - | 756 | WP_054190639.1 | SDR family oxidoreductase | - |
| L1O91_RS07130 (1506866) | 1506866..1507681 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| L1O91_RS07135 (1507784) | 1507784..1508704 | - | 921 | WP_054190638.1 | ribonuclease Z | - |
| L1O91_RS07140 (1509017) | 1509017..1510501 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| L1O91_RS07145 (1510731) | 1510731..1511597 | + | 867 | WP_171973427.1 | AraC family transcriptional regulator | - |
| L1O91_RS07150 (1511680) | 1511680..1513329 | - | 1650 | WP_054190636.1 | alpha-glucosidase | - |
| L1O91_RS07155 (1513345) | 1513345..1514364 | - | 1020 | WP_054190635.1 | LacI family DNA-binding transcriptional regulator | - |
| L1O91_RS07160 (1514365) | 1514365..1514605 | - | 241 | Protein_1402 | hypothetical protein | - |
| L1O91_RS07165 (1514544) | 1514544..1514915 | - | 372 | WP_054190634.1 | VOC family protein | - |
| L1O91_RS07170 (1515134) | 1515134..1516540 | - | 1407 | WP_054190004.1 | NADP-dependent phosphogluconate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|