MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP091065 Location: 914319..946199 Organism: Escherichia coli strain DOC14 Replicon: chromosome
Accession: NZ_CP091065 Location: 914319..946199 Organism: Escherichia coli strain DOC14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1123_RS04440 (910503) | 910503..911771 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| L1123_RS04445 (911791) | 911791..912768 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| L1123_RS04450 (913104) | 913104..915356 | - | 2253 | Protein_868 | alpha-amylase family glycosyl hydrolase | - |
| L1123_RS04460 (916742) | 916742..918115 | + | 1374 | Protein_869 | DUF5507 domain-containing protein | - |
| L1123_RS04465 (918461) | 918461..918619 | + | 159 | Protein_870 | recombinase family protein | - |
| L1123_RS04470 (918843) | 918843..918962 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| L1123_RS04475 (919027) | 919027..923607 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| L1123_RS04480 (923971) | 923971..924300 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| L1123_RS04485 (924321) | 924321..924638 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| L1123_RS04490 (924676) | 924676..924876 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| L1123_RS04495 (924885) | 924885..925367 | - | 483 | WP_001407480.1 | RadC family protein | - |
| L1123_RS04500 (925376) | 925376..925834 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| L1123_RS04505 (925937) | 925937..926160 | - | 224 | Protein_878 | DUF905 domain-containing protein | - |
| L1123_RS04510 (926732) | 926732..928435 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| L1123_RS04515 (928577) | 928577..929586 | + | 1010 | Protein_880 | arsenic transporter | - |
| L1123_RS04520 (929599) | 929599..929751 | + | 153 | Protein_881 | arsenate reductase | - |
| L1123_RS04525 (930138) | 930138..930605 | - | 468 | WP_000702495.1 | protein YfjT | - |
| L1123_RS04530 (930629) | 930629..931072 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| L1123_RS04535 (931072) | 931072..931308 | - | 237 | WP_001144029.1 | protein YpjK | - |
| L1123_RS04540 (931349) | 931349..932050 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| L1123_RS04545 (932267) | 932267..933088 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| L1123_RS04550 (933180) | 933180..934043 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| L1123_RS04555 (934398) | 934398..934769 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| L1123_RS04560 (934762) | 934762..935835 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| L1123_RS04565 (935977) | 935977..936240 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| L1123_RS04570 (936600) | 936600..938216 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| L1123_RS04575 (938213) | 938213..940402 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| L1123_RS04580 (940580) | 940580..941206 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| L1123_RS04585 (941359) | 941359..942768 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| L1123_RS04590 (942897) | 942897..943109 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| L1123_RS04595 (943153) | 943153..944109 | + | 957 | WP_000510827.1 | protein YfjH | - |
| L1123_RS04600 (944353) | 944353..945594 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| L1123_RS04610 (946375) | 946375..946857 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| L1123_RS04615 (947028) | 947028..947465 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| L1123_RS04620 (947455) | 947455..947745 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| L1123_RS04625 (947807) | 947807..948148 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| L1123_RS04630 (948297) | 948297..949958 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| L1123_RS04635 (950044) | 950044..950922 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |