MGE detailed information
MGE type: Conjugative plasmid MGE length: 71807 bp
Accession: NZ_CP091025 Location: 1..71807 Organism: Escherichia coli strain STEC379 Replicon: plasmid p_STEC379
Accession: NZ_CP091025 Location: 1..71807 Organism: Escherichia coli strain STEC379 Replicon: plasmid p_STEC379
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1P13_RS24710 () | 1..316 | - | 316 | WP_235399546.1 | transglycosylase SLT domain-containing protein | - |
| L1P13_RS24715 () | 637..1020 | + | 384 | WP_040073112.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| L1P13_RS24720 () | 1252..2479 | - | 1228 | Protein_2 | IS3 family transposase IS2 | Transposase |
| L1P13_RS24725 () | 2602..3231 | + | 630 | WP_097438274.1 | PAS domain-containing protein | - |
| L1P13_RS24730 () | 3325..3552 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| L1P13_RS24735 () | 3586..3951 | + | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| L1P13_RS24740 () | 3966..4277 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| L1P13_RS24745 () | 4299..4865 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| L1P13_RS24750 () | 4852..5580 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| L1P13_RS24755 () | 5580..7007 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| L1P13_RS24760 () | 6997..7587 | + | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| L1P13_RS24765 () | 7574..7771 | + | 198 | WP_235399547.1 | conjugal transfer protein TrbD | - |
| L1P13_RS24770 () | 7783..8033 | + | 251 | Protein_12 | conjugal transfer protein TrbG | - |
| L1P13_RS24775 () | 8030..8545 | + | 516 | WP_235399548.1 | type IV conjugative transfer system lipoprotein TraV | - |
| L1P13_RS24780 () | 8680..8901 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| L1P13_RS24785 () | 9061..9597 | + | 537 | Protein_15 | TraC family protein | - |
| L1P13_RS24790 () | 9646..10872 | - | 1227 | WP_001484257.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| L1P13_RS24795 () | 10931..11335 | + | 405 | WP_001175008.1 | IS200/IS605 family transposase | - |
| L1P13_RS24800 () | 11407..13506 | + | 2100 | Protein_18 | type IV secretion system protein TraC | - |
| L1P13_RS24805 () | 13503..13889 | + | 387 | WP_032082946.1 | type-F conjugative transfer system protein TrbI | - |
| L1P13_RS24810 () | 13886..14518 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| L1P13_RS24815 () | 14515..15507 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| L1P13_RS24820 () | 15516..16154 | + | 639 | WP_235399561.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| L1P13_RS24825 () | 16151..17959 | + | 1809 | WP_032082947.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| L1P13_RS24830 () | 17986..18243 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| L1P13_RS24835 () | 18236..18979 | + | 744 | WP_135460420.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| L1P13_RS24840 () | 18995..19342 | + | 348 | WP_032082949.1 | conjugal transfer protein TrbA | - |
| L1P13_RS24845 () | 19344..19619 | - | 276 | WP_001513501.1 | hypothetical protein | - |
| L1P13_RS24850 () | 19700..19984 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| L1P13_RS24855 () | 19971..20516 | + | 546 | WP_032082911.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| L1P13_RS24860 () | 20446..20787 | + | 342 | WP_001442101.1 | P-type conjugative transfer protein TrbJ | - |
| L1P13_RS24865 () | 20774..21166 | + | 393 | WP_032082924.1 | F-type conjugal transfer protein TrbF | - |
| L1P13_RS24870 () | 21153..22526 | + | 1374 | WP_000944319.1 | conjugal transfer pilus assembly protein TraH | - |
| L1P13_RS24875 () | 22523..25348 | + | 2826 | WP_032082912.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| L1P13_RS24880 () | 25345..25854 | + | 510 | WP_032082913.1 | conjugal transfer entry exclusion protein TraS | - |
| L1P13_RS24885 () | 25868..26599 | + | 732 | WP_024187508.1 | conjugal transfer complement resistance protein TraT | - |
| L1P13_RS24890 () | 26851..29004 | + | 2154 | WP_062873762.1 | type IV conjugative transfer system coupling protein TraD | - |
| L1P13_RS24895 () | 29013..29411 | - | 399 | WP_000911317.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| L1P13_RS24900 () | 29411..29638 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| L1P13_RS24905 () | 29720..34990 | + | 5271 | WP_235399549.1 | Multifunctional conjugation protein TraI | Relaxase |
| L1P13_RS24910 () | 35010..35756 | + | 747 | WP_235399550.1 | conjugal transfer pilus acetylase TraX | - |
| L1P13_RS24915 () | 35811..36371 | + | 561 | WP_235399551.1 | fertility inhibition protein FinO | - |
| L1P13_RS24920 () | 36503..36703 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| L1P13_RS24925 () | 37090..37689 | + | 600 | WP_063082122.1 | PIN domain-containing protein | - |
| L1P13_RS24930 () | 37751..38083 | + | 333 | WP_152916585.1 | hypothetical protein | - |
| L1P13_RS24935 () | 38348..38602 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| L1P13_RS24940 () | 38839..38913 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| L1P13_RS24945 () | 38906..39763 | + | 858 | WP_024233440.1 | incFII family plasmid replication initiator RepA | - |
| L1P13_RS24950 () | 40463..40603 | + | 141 | WP_235399552.1 | hypothetical protein | - |
| L1P13_RS24955 () | 40683..41510 | - | 828 | WP_235399553.1 | hypothetical protein | - |
| L1P13_RS24960 () | 41837..43024 | - | 1188 | WP_235399554.1 | IS91 family transposase ISEc37 | Transposase |
| L1P13_RS24965 () | 43024..43389 | - | 366 | WP_000124135.1 | hypothetical protein | - |
| L1P13_RS24970 () | 43424..43882 | - | 459 | Protein_52 | transposase | - |
| L1P13_RS24975 () | 43960..44109 | - | 150 | Protein_53 | IS3 family transposase ISKpn37 | Transposase |
| L1P13_RS24980 () | 44617..44835 | + | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| L1P13_RS24985 () | 45129..45545 | + | 417 | Protein_55 | IS66 family transposase ISCro1 | Transposase |
| L1P13_RS24990 () | 45617..46414 | - | 798 | WP_000544828.1 | IS21 family transposase IS21 | Transposase |
| L1P13_RS24995 () | 46414..47586 | - | 1173 | WP_015056461.1 | IS21 family transposase IS21 | Transposase |
| L1P13_RS25000 () | 47689..47883 | - | 195 | Protein_58 | IS3 family transposase ISKpn37 | Transposase |
| L1P13_RS25005 () | 47955..48062 | - | 108 | Protein_59 | IS3 family transposase IS1351 | Transposase |
| L1P13_RS25010 () | 48677..49213 | + | 537 | WP_235399555.1 | hypothetical protein | - |
| L1P13_RS25015 () | 49229..49513 | - | 285 | WP_235399563.1 | hypothetical protein | - |
| L1P13_RS25020 () | 49491..49745 | + | 255 | WP_231245300.1 | adhesin biosynthesis transcription regulatory family protein | - |
| L1P13_RS25025 () | 49880..50398 | + | 519 | WP_235399556.1 | Major MR/P fimbria protein | VF |
| L1P13_RS25030 () | 50503..52917 | + | 2415 | WP_235399557.1 | putative outer membrane usher protein ElfC | VF |
| L1P13_RS25035 () | 52910..53602 | + | 693 | WP_062886836.1 | Chaperone protein FaeE | VF |
| L1P13_RS25040 () | 53718..54095 | + | 378 | WP_235399558.1 | hypothetical protein | - |
| L1P13_RS25045 () | 54246..55088 | + | 843 | WP_064578920.1 | hypothetical protein | - |
| L1P13_RS25050 () | 55144..55269 | - | 126 | Protein_68 | IS256 family transposase | - |
| L1P13_RS25055 () | 55341..55421 | - | 81 | Protein_69 | ATP-binding protein | - |
| L1P13_RS25060 () | 55506..55790 | + | 285 | WP_032084130.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| L1P13_RS25065 () | 55790..56065 | + | 276 | WP_032084131.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L1P13_RS25070 () | 56171..56374 | + | 204 | Protein_72 | hypothetical protein | - |
| L1P13_RS25075 () | 56722..57069 | + | 348 | WP_235399559.1 | DUF6404 family protein | - |
| L1P13_RS25080 () | 57087..57521 | - | 435 | Protein_74 | hypothetical protein | - |
| L1P13_RS25085 () | 57805..58728 | - | 924 | WP_032084040.1 | hypothetical protein | - |
| L1P13_RS25090 () | 59621..60394 | - | 774 | WP_032084041.1 | YaiO family outer membrane beta-barrel protein | - |
| L1P13_RS25095 () | 60396..60866 | - | 471 | WP_235399562.1 | acetyltransferase | - |
| L1P13_RS25105 () | 62154..62504 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| L1P13_RS25110 () | 62507..63469 | - | 963 | WP_000959883.1 | plasmid segregation protein ParM | - |
| L1P13_RS25115 () | 63616..63909 | + | 294 | WP_032084025.1 | hypothetical protein | - |
| L1P13_RS25120 () | 63986..64132 | + | 147 | Protein_82 | adenine-specific DNA-methyltransferase | - |
| L1P13_RS25125 () | 64183..65409 | - | 1227 | WP_001484257.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| L1P13_RS25130 () | 65468..65872 | + | 405 | WP_001175008.1 | IS200/IS605 family transposase | - |
| L1P13_RS25135 () | 65950..67464 | + | 1515 | Protein_85 | ParB/RepB/Spo0J family partition protein | - |
| L1P13_RS25140 () | 67519..67953 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| L1P13_RS25145 () | 67950..68712 | + | 763 | Protein_87 | plasmid SOS inhibition protein A | - |
| L1P13_RS25150 () | 68681..68869 | - | 189 | WP_032084246.1 | hypothetical protein | - |
| - () | 68681..68905 | + | 225 | NuclAT_0 | - | - |
| - () | 68681..68905 | + | 225 | NuclAT_0 | - | - |
| - () | 68681..68905 | + | 225 | NuclAT_0 | - | - |
| - () | 68681..68905 | + | 225 | NuclAT_0 | - | - |
| - | 68838..68903 | - | 66 | - | - | Antitoxin Detail |
| L1P13_RS25155 () | 68891..69040 | + | 150 | Protein_89 | plasmid maintenance protein Mok | - |
| L1P13_RS25160 () | 68991..69107 | + | 117 | WP_001323520.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| L1P13_RS25165 () | 69524..69697 | - | 174 | Protein_91 | hypothetical protein | - |
| L1P13_RS25170 () | 69767..69973 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| L1P13_RS25175 () | 69998..70284 | + | 287 | Protein_93 | hypothetical protein | - |
| L1P13_RS25180 () | 70403..71224 | + | 822 | WP_074014913.1 | DUF932 domain-containing protein | - |
| L1P13_RS25185 () | 71521..71807 | - | 287 | WP_235399560.1 | transglycosylase SLT domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|