MGE detailed information
MGE type: Conjugative plasmid MGE length: 87231 bp
Accession: NZ_CP091023 Location: 1..87231 Organism: Escherichia coli strain STEC276 Replicon: plasmid p_STEC276
Accession: NZ_CP091023 Location: 1..87231 Organism: Escherichia coli strain STEC276 Replicon: plasmid p_STEC276
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1O93_RS23615 (1) | 1..1417 | + | 1417 | Protein_0 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| L1O93_RS23620 (1458) | 1458..1724 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| L1O93_RS23625 (2201) | 2201..2650 | - | 450 | WP_001236003.1 | hypothetical protein | - |
| L1O93_RS23630 (2791) | 2791..3639 | - | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| L1O93_RS23635 (3679) | 3679..3957 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| L1O93_RS23640 (3957) | 3957..4226 | - | 270 | WP_032307223.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| L1O93_RS23645 (4281) | 4281..4439 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| L1O93_RS23650 (5139) | 5139..5996 | - | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| L1O93_RS24340 (5989) | 5989..6063 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| L1O93_RS23665 (6297) | 6297..6554 | - | 258 | WP_032082917.1 | replication regulatory protein RepA | - |
| L1O93_RS23670 (6794) | 6794..7384 | - | 591 | WP_032082916.1 | DUF2726 domain-containing protein | - |
| L1O93_RS23675 (7422) | 7422..7631 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| L1O93_RS23680 (7677) | 7677..8138 | - | 462 | WP_021545193.1 | thermonuclease family protein | - |
| L1O93_RS23685 (8437) | 8437..8595 | - | 159 | WP_021545194.1 | hypothetical protein | - |
| L1O93_RS23690 (8728) | 8728..9288 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| L1O93_RS23695 (9391) | 9391..10251 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| L1O93_RS23700 (10310) | 10310..11056 | - | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| L1O93_RS23705 (11076) | 11076..16346 | - | 5271 | WP_240992427.1 | Multifunctional conjugation protein TraI | Relaxase |
| L1O93_RS23710 (16428) | 16428..16655 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| L1O93_RS23715 (16655) | 16655..17053 | + | 399 | WP_000911317.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| L1O93_RS23720 (17062) | 17062..19215 | - | 2154 | WP_240992428.1 | type IV conjugative transfer system coupling protein TraD | - |
| L1O93_RS23725 (19467) | 19467..20198 | - | 732 | WP_024187508.1 | conjugal transfer complement resistance protein TraT | - |
| L1O93_RS23730 (20212) | 20212..20610 | - | 399 | WP_240992429.1 | conjugal transfer entry exclusion protein TraS | - |
| L1O93_RS23735 (20717) | 20717..23542 | - | 2826 | WP_032082912.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| L1O93_RS23740 (23539) | 23539..24912 | - | 1374 | WP_000944319.1 | conjugal transfer pilus assembly protein TraH | - |
| L1O93_RS23745 (24899) | 24899..25291 | - | 393 | WP_032082924.1 | F-type conjugal transfer protein TrbF | - |
| L1O93_RS23750 (25278) | 25278..25619 | - | 342 | WP_001442101.1 | P-type conjugative transfer protein TrbJ | - |
| L1O93_RS23755 (25549) | 25549..26094 | - | 546 | WP_032082911.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| L1O93_RS23760 (26081) | 26081..26365 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| L1O93_RS23765 (26446) | 26446..26721 | + | 276 | WP_001513501.1 | hypothetical protein | - |
| L1O93_RS23770 (26723) | 26723..27070 | - | 348 | WP_032082949.1 | conjugal transfer protein TrbA | - |
| L1O93_RS23775 (27086) | 27086..27829 | - | 744 | WP_135460420.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| L1O93_RS23780 (27822) | 27822..28079 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| L1O93_RS23785 (28106) | 28106..29914 | - | 1809 | WP_032082947.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| L1O93_RS23790 (29911) | 29911..30549 | - | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| L1O93_RS23795 (30558) | 30558..31550 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| L1O93_RS23800 (31547) | 31547..32179 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| L1O93_RS23805 (32176) | 32176..32562 | - | 387 | WP_240992430.1 | type-F conjugative transfer system protein TrbI | - |
| L1O93_RS23810 (32559) | 32559..34658 | - | 2100 | Protein_38 | type IV secretion system protein TraC | - |
| L1O93_RS23815 (34730) | 34730..35134 | - | 405 | WP_001175008.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| L1O93_RS23820 (35193) | 35193..36419 | + | 1227 | WP_001484257.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| L1O93_RS23825 (36468) | 36468..37004 | - | 537 | Protein_41 | TraC family protein | - |
| L1O93_RS23830 (37164) | 37164..37385 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| L1O93_RS23835 (37520) | 37520..38035 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| L1O93_RS23840 (38032) | 38032..38282 | - | 251 | Protein_44 | conjugal transfer protein TrbG | - |
| L1O93_RS23845 (38294) | 38294..38491 | - | 198 | WP_042064805.1 | conjugal transfer protein TrbD | - |
| L1O93_RS23850 (38478) | 38478..39068 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| L1O93_RS23855 (39058) | 39058..40485 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| L1O93_RS23860 (40485) | 40485..41213 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| L1O93_RS23865 (41200) | 41200..41766 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| L1O93_RS23870 (41788) | 41788..42099 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| L1O93_RS23875 (42114) | 42114..42479 | - | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| L1O93_RS23880 (42513) | 42513..42740 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| L1O93_RS23885 (42836) | 42836..43522 | - | 687 | WP_000332492.1 | PAS domain-containing protein | - |
| L1O93_RS23890 (43712) | 43712..44095 | - | 384 | WP_040073112.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| L1O93_RS23895 (44417) | 44417..45019 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
| L1O93_RS23900 (45316) | 45316..46137 | - | 822 | WP_074014913.1 | DUF932 domain-containing protein | - |
| L1O93_RS23905 (46256) | 46256..46542 | - | 287 | Protein_57 | hypothetical protein | - |
| L1O93_RS23910 (46567) | 46567..46773 | - | 207 | WP_000547968.1 | hypothetical protein | - |
| L1O93_RS23915 (46843) | 46843..47016 | + | 174 | Protein_59 | hypothetical protein | - |
| L1O93_RS23920 (47014) | 47014..47244 | - | 231 | WP_074014914.1 | hypothetical protein | - |
| L1O93_RS23925 (47464) | 47464..47589 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| L1O93_RS23930 (47531) | 47531..47680 | - | 150 | Protein_62 | plasmid maintenance protein Mok | - |
| - (47666) | 47666..47890 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (47666) | 47666..47890 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (47666) | 47666..47890 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (47666) | 47666..47890 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| L1O93_RS23935 (47702) | 47702..47890 | + | 189 | WP_032084246.1 | hypothetical protein | - |
| L1O93_RS23940 (47859) | 47859..48621 | - | 763 | Protein_64 | plasmid SOS inhibition protein A | - |
| L1O93_RS23945 (48618) | 48618..49052 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| L1O93_RS23950 (49107) | 49107..50621 | - | 1515 | Protein_66 | ParB/RepB/Spo0J family partition protein | - |
| L1O93_RS23955 (50699) | 50699..51103 | - | 405 | WP_001175008.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| L1O93_RS23960 (51162) | 51162..52388 | + | 1227 | WP_001484257.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| L1O93_RS23965 (52439) | 52439..52585 | - | 147 | Protein_69 | adenine-specific DNA-methyltransferase | - |
| L1O93_RS23970 (52662) | 52662..52955 | - | 294 | WP_032084025.1 | hypothetical protein | - |
| L1O93_RS23975 (53103) | 53103..54065 | + | 963 | WP_000959883.1 | plasmid segregation protein ParM | - |
| L1O93_RS23980 (54068) | 54068..54418 | + | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| L1O93_RS23985 (54988) | 54988..55685 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| L1O93_RS23990 (55695) | 55695..56165 | + | 471 | WP_235399562.1 | acetyltransferase | - |
| L1O93_RS23995 (56167) | 56167..56940 | + | 774 | WP_032084041.1 | YaiO family outer membrane beta-barrel protein | - |
| L1O93_RS24000 (57833) | 57833..58756 | + | 924 | WP_032084040.1 | hypothetical protein | - |
| L1O93_RS24005 (59040) | 59040..59474 | + | 435 | Protein_77 | hypothetical protein | - |
| L1O93_RS24010 (59492) | 59492..59839 | - | 348 | WP_235399559.1 | DUF6404 family protein | - |
| L1O93_RS24015 (60187) | 60187..60390 | - | 204 | Protein_79 | hypothetical protein | - |
| L1O93_RS24020 (60496) | 60496..60771 | - | 276 | WP_032084131.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L1O93_RS24025 (60771) | 60771..61055 | - | 285 | WP_032084130.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| L1O93_RS24030 (61140) | 61140..61220 | + | 81 | Protein_82 | ATP-binding protein | - |
| L1O93_RS24035 (61292) | 61292..61417 | + | 126 | Protein_83 | IS256 family transposase | - |
| L1O93_RS24040 (61484) | 61484..62326 | - | 843 | WP_064578920.1 | hypothetical protein | - |
| L1O93_RS24045 (62477) | 62477..62857 | - | 381 | WP_140431740.1 | hypothetical protein | - |
| L1O93_RS24050 (62973) | 62973..63665 | - | 693 | WP_062886836.1 | Chaperone protein FaeE | VF |
| L1O93_RS24055 (63658) | 63658..66072 | - | 2415 | WP_240992431.1 | putative outer membrane usher protein ElfC | VF |
| L1O93_RS24060 (66177) | 66177..66695 | - | 519 | WP_062886838.1 | hypothetical protein | VF |
| L1O93_RS24065 (66830) | 66830..67084 | - | 255 | WP_231245300.1 | adhesin biosynthesis transcription regulatory family protein | - |
| L1O93_RS24070 (67062) | 67062..67346 | + | 285 | WP_235399563.1 | hypothetical protein | - |
| L1O93_RS24075 (67362) | 67362..67898 | - | 537 | WP_235399555.1 | hypothetical protein | - |
| L1O93_RS24080 (68513) | 68513..68620 | + | 108 | Protein_92 | IS3 family transposase IS1351 | Transposase |
| L1O93_RS24085 (68692) | 68692..68886 | + | 195 | Protein_93 | IS3 family transposase ISKpn37 | Transposase |
| L1O93_RS24090 (68989) | 68989..70161 | + | 1173 | WP_240992422.1 | IS21 family transposase IS21 | Transposase |
| L1O93_RS24095 (70161) | 70161..70958 | + | 798 | WP_000544828.1 | IS21 family transposase IS21 | Transposase |
| L1O93_RS24100 (71030) | 71030..71446 | - | 417 | Protein_96 | IS66 family transposase ISCro1 | Transposase |
| L1O93_RS24105 (71740) | 71740..71958 | - | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| L1O93_RS24115 (73802) | 73802..73951 | + | 150 | Protein_99 | IS3 family transposase ISKpn37 | Transposase |
| L1O93_RS24120 (74029) | 74029..74487 | + | 459 | Protein_100 | transposase | - |
| L1O93_RS24125 (74522) | 74522..74887 | + | 366 | WP_000124135.1 | hypothetical protein | - |
| L1O93_RS24130 (74887) | 74887..76074 | + | 1188 | WP_042634447.1 | IS91 family transposase ISEc37 | Transposase |
| L1O93_RS24135 (76401) | 76401..77228 | + | 828 | WP_050511319.1 | hypothetical protein | - |
| L1O93_RS24140 (77743) | 77743..79320 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| L1O93_RS24145 (79630) | 79630..80190 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| L1O93_RS24150 (80194) | 80194..83160 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| L1O93_RS24155 (83218) | 83218..83460 | + | 243 | WP_000844627.1 | transposase | - |
| L1O93_RS24160 (83492) | 83492..84142 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| L1O93_RS24165 (84248) | 84248..85447 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| L1O93_RS24170 (85479) | 85479..86363 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| L1O93_RS24175 (86501) | 86501..86893 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| L1O93_RS24180 (86897) | 86897..87231 | + | 335 | Protein_112 | Tn3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|