MGE detailed information
MGE type: Genomic_island MGE length: 38021 bp
Accession: NZ_CP090930 Location: 4283674..4321694 Organism: Salmonella enterica subsp. enterica serovar Agona strain R21.2430 Replicon: chromosome
Accession: NZ_CP090930 Location: 4283674..4321694 Organism: Salmonella enterica subsp. enterica serovar Agona strain R21.2430 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1L23_RS21110 (4278941) | 4278941..4279471 | - | 531 | WP_000907671.1 | Hcp family type VI secretion system effector | - |
| L1L23_RS21115 (4280189) | 4280189..4281202 | + | 1014 | WP_001094623.1 | tryptophan--tRNA ligase | - |
| L1L23_RS21120 (4281203) | 4281203..4281976 | - | 774 | WP_000841654.1 | Uxu operon transcriptional regulator | - |
| L1L23_RS21125 (4282326) | 4282326..4282991 | + | 666 | WP_000588696.1 | dienelactone hydrolase family protein | - |
| L1L23_RS21130 (4283008) | 4283008..4283469 | - | 462 | WP_001654330.1 | DUF302 domain-containing protein | - |
| L1L23_RS21135 (4283674) | 4283674..4284585 | - | 912 | WP_000556763.1 | hypothetical protein | - |
| L1L23_RS21140 (4284937) | 4284937..4285545 | - | 609 | WP_000864870.1 | DUF1062 domain-containing protein | - |
| L1L23_RS21145 (4286033) | 4286033..4286290 | + | 258 | WP_001054380.1 | YjhX family toxin | - |
| L1L23_RS21150 (4286295) | 4286295..4287926 | + | 1632 | WP_077905762.1 | class I SAM-dependent methyltransferase | - |
| L1L23_RS21155 (4288486) | 4288486..4289202 | + | 717 | WP_000532939.1 | putative transcriptional regulatory protein YeeN | VF |
| L1L23_RS21160 (4289680) | 4289680..4290555 | - | 876 | WP_000199890.1 | HNH endonuclease | - |
| L1L23_RS21165 (4290908) | 4290908..4291330 | - | 423 | WP_000941935.1 | Glutathione transferase FosA | ARG |
| L1L23_RS21170 (4291453) | 4291453..4292749 | + | 1297 | Protein_4152 | Fic family protein | - |
| L1L23_RS21175 (4292825) | 4292825..4295887 | - | 3063 | WP_000481469.1 | HsdR family type I site-specific deoxyribonuclease | - |
| L1L23_RS21180 (4295890) | 4295890..4297038 | - | 1149 | WP_000139625.1 | restriction endonuclease subunit S | - |
| L1L23_RS21185 (4297039) | 4297039..4298529 | - | 1491 | WP_006495883.1 | class I SAM-dependent DNA methyltransferase | - |
| L1L23_RS21190 (4298535) | 4298535..4300034 | - | 1500 | WP_234969757.1 | class I SAM-dependent DNA methyltransferase | - |
| L1L23_RS21195 (4300332) | 4300332..4301315 | + | 984 | WP_000210270.1 | toll/interleukin-1 receptor domain-containing protein | - |
| L1L23_RS21200 (4301584) | 4301584..4302111 | - | 528 | WP_001043245.1 | hypothetical protein | - |
| L1L23_RS21205 (4302108) | 4302108..4303304 | - | 1197 | WP_000542997.1 | hypothetical protein | - |
| L1L23_RS21210 (4303493) | 4303493..4304482 | - | 990 | WP_077905772.1 | restriction endonuclease | - |
| L1L23_RS21215 (4304794) | 4304794..4306122 | - | 1329 | WP_001255026.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| L1L23_RS21220 (4306127) | 4306127..4306432 | - | 306 | WP_001099274.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| L1L23_RS21225 (4307179) | 4307179..4307649 | + | 471 | WP_001222753.1 | hypothetical protein | - |
| L1L23_RS21235 (4309187) | 4309187..4309423 | + | 237 | WP_001748005.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| L1L23_RS21240 (4309540) | 4309540..4310928 | - | 1389 | WP_000121182.1 | hypothetical protein | - |
| L1L23_RS21245 (4310928) | 4310928..4312940 | - | 2013 | WP_001052203.1 | DUF87 domain-containing protein | - |
| L1L23_RS21250 (4312937) | 4312937..4313989 | - | 1053 | WP_001748006.1 | site-specific DNA-methyltransferase | - |
| L1L23_RS21255 (4314437) | 4314437..4314730 | + | 294 | WP_001748007.1 | hypothetical protein | - |
| L1L23_RS21260 (4314816) | 4314816..4315726 | + | 911 | Protein_4170 | zincin-like metallopeptidase domain-containing protein | - |
| L1L23_RS21265 (4315832) | 4315832..4316287 | + | 456 | WP_031602458.1 | NUDIX domain-containing protein | - |
| L1L23_RS21270 (4316578) | 4316578..4318190 | + | 1613 | Protein_4172 | TraI domain-containing protein | - |
| L1L23_RS21275 (4318180) | 4318180..4319106 | + | 927 | WP_000142420.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| L1L23_RS21285 (4320787) | 4320787..4321095 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| L1L23_RS21290 (4321098) | 4321098..4321337 | - | 240 | WP_000016244.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| L1L23_RS21295 (4321446) | 4321446..4321694 | - | 249 | WP_000254751.1 | ribbon-helix-helix domain-containing protein | - |
| L1L23_RS21300 (4321885) | 4321885..4322316 | - | 432 | Protein_4178 | helix-turn-helix domain-containing protein | - |
| L1L23_RS21315 (4323074) | 4323074..4324093 | + | 1020 | WP_000152567.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| L1L23_RS21320 (4324121) | 4324121..4324651 | - | 531 | WP_000896759.1 | gluconokinase | - |
| L1L23_RS21325 (4324868) | 4324868..4325899 | + | 1032 | WP_000453362.1 | L-idonate 5-dehydrogenase | - |
| L1L23_RS21330 (4325924) | 4325924..4326688 | + | 765 | WP_000998688.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|