MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 61132 bp
Accession: NZ_CP090885 Location: 1019245..1080376 Organism: Streptococcus pneumoniae strain ND6401 Replicon: chromosome
Accession: NZ_CP090885 Location: 1019245..1080376 Organism: Streptococcus pneumoniae strain ND6401 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1A16_RS05095 (L1A16_05095) | 1015660..1015827 | - | 168 | WP_001809348.1 | hypothetical protein | - |
| L1A16_RS05100 (L1A16_05100) | 1015913..1017091 | + | 1179 | WP_000174775.1 | hypothetical protein | - |
| L1A16_RS05105 (L1A16_05105) | 1017300..1023161 | + | 5862 | WP_000417147.1 | ZmpA/ZmpB/ZmpC family metallo-endopeptidase | - |
| L1A16_RS05110 (L1A16_05110) | 1023865..1024038 | + | 174 | WP_000159603.1 | hypothetical protein | - |
| L1A16_RS05115 (L1A16_05115) | 1024035..1024814 | + | 780 | WP_000822769.1 | replication initiator protein A | - |
| L1A16_RS05120 (L1A16_05120) | 1024913..1026271 | + | 1359 | WP_001210972.1 | DNA (cytosine-5-)-methyltransferase | - |
| L1A16_RS05125 (L1A16_05125) | 1026255..1026704 | + | 450 | WP_000645881.1 | hypothetical protein | - |
| L1A16_RS05130 (L1A16_05130) | 1026697..1027077 | + | 381 | WP_000566541.1 | hypothetical protein | - |
| L1A16_RS05135 (L1A16_05135) | 1027090..1027323 | + | 234 | WP_000840776.1 | hypothetical protein | - |
| L1A16_RS05140 (L1A16_05140) | 1027326..1027913 | + | 588 | WP_000821269.1 | type II CAAX endopeptidase family protein | - |
| L1A16_RS05145 (L1A16_05145) | 1027987..1028631 | + | 645 | WP_041974923.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| L1A16_RS05150 (L1A16_05150) | 1028631..1029467 | + | 837 | WP_000492401.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| L1A16_RS05155 (L1A16_05155) | 1029750..1030049 | + | 300 | WP_000869753.1 | hypothetical protein | - |
| L1A16_RS05160 (L1A16_05160) | 1030039..1030527 | + | 489 | WP_000093675.1 | hypothetical protein | - |
| L1A16_RS05165 (L1A16_05165) | 1030527..1032404 | + | 1878 | WP_001841466.1 | type IV secretory system conjugative DNA transfer family protein | - |
| L1A16_RS05170 (L1A16_05170) | 1032425..1032667 | + | 243 | WP_000627865.1 | hypothetical protein | - |
| L1A16_RS05175 (L1A16_05175) | 1032684..1033538 | + | 855 | WP_001054263.1 | conjugal transfer protein TrbL | - |
| L1A16_RS05180 (L1A16_05180) | 1033592..1033951 | + | 360 | WP_001097591.1 | PrgI family protein | - |
| L1A16_RS05185 (L1A16_05185) | 1033902..1036259 | + | 2358 | WP_000824170.1 | hypothetical protein | - |
| L1A16_RS05190 (L1A16_05190) | 1036271..1039084 | + | 2814 | WP_000653460.1 | phage tail tip lysozyme | - |
| L1A16_RS05195 (L1A16_05195) | 1039655..1039969 | + | 315 | WP_000420680.1 | YdcP family protein | - |
| L1A16_RS05200 (L1A16_05200) | 1039985..1040371 | + | 387 | WP_000985016.1 | DUF961 family protein | - |
| L1A16_RS05205 (L1A16_05205) | 1040411..1041805 | + | 1395 | WP_000813769.1 | FtsK/SpoIIIE domain-containing protein | - |
| L1A16_RS05210 (L1A16_05210) | 1041808..1041948 | + | 141 | WP_074186995.1 | conjugal transfer protein | - |
| L1A16_RS05215 (L1A16_05215) | 1041983..1043185 | + | 1203 | Protein_1039 | MobT family relaxase | - |
| L1A16_RS05220 (L1A16_05220) | 1043234..1043401 | + | 168 | WP_000502600.1 | MLS leader peptide | - |
| L1A16_RS05225 (L1A16_05225) | 1043450..1043503 | + | 54 | WP_117115223.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| L1A16_RS05230 (L1A16_05230) | 1043658..1044395 | + | 738 | WP_001038785.1 | rRNA adenine N-6-methyltransferase | ARG |
| L1A16_RS05235 (L1A16_05235) | 1044652..1045899 | - | 1248 | WP_000019067.1 | ISL3 family transposase IS1165 | Transposase |
| L1A16_RS05240 (L1A16_05240) | 1046079..1046300 | + | 222 | WP_001009056.1 | hypothetical protein | - |
| L1A16_RS05245 (L1A16_05245) | 1046417..1046914 | + | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| L1A16_RS05250 (L1A16_05250) | 1047003..1047395 | + | 393 | WP_002345009.1 | conjugal transfer protein | - |
| L1A16_RS05255 (L1A16_05255) | 1047379..1049826 | + | 2448 | WP_000331148.1 | ATP-binding protein | - |
| L1A16_RS05260 (L1A16_05260) | 1049829..1052012 | + | 2184 | WP_001841471.1 | membrane protein | - |
| L1A16_RS05265 (L1A16_05265) | 1052009..1053010 | + | 1002 | WP_000769862.1 | putative endopeptidase p60 | VF |
| L1A16_RS05270 (L1A16_05270) | 1053007..1053942 | + | 936 | WP_001224320.1 | conjugal transfer protein | - |
| L1A16_RS05275 (L1A16_05275) | 1054187..1054303 | + | 117 | WP_001791010.1 | tetracycline resistance determinant leader peptide | - |
| L1A16_RS05280 (L1A16_05280) | 1054319..1056238 | + | 1920 | WP_238881014.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| L1A16_RS05285 (L1A16_05285) | 1056357..1056524 | + | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| L1A16_RS05290 (L1A16_05290) | 1056584..1056937 | - | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| L1A16_RS05295 (L1A16_05295) | 1057442..1057864 | + | 423 | WP_000804599.1 | sigma-70 family RNA polymerase sigma factor | - |
| L1A16_RS05300 (L1A16_05300) | 1057861..1058091 | + | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| L1A16_RS05305 (L1A16_05305) | 1058316..1058564 | - | 249 | Protein_1057 | hypothetical protein | - |
| L1A16_RS05310 (L1A16_05310) | 1058548..1058751 | + | 204 | WP_000814512.1 | excisionase | - |
| L1A16_RS05315 (L1A16_05315) | 1058833..1060050 | + | 1218 | WP_001291568.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| L1A16_RS05320 (L1A16_05320) | 1060936..1061667 | + | 732 | WP_000247939.1 | ABC transporter ATP-binding protein YxdL | VF |
| L1A16_RS05325 (L1A16_05325) | 1061685..1063001 | + | 1317 | WP_000915988.1 | FtsX-like permease family protein | - |
| L1A16_RS05330 (L1A16_05330) | 1063432..1063842 | + | 411 | WP_000387507.1 | thrombospondin type 3 repeat-containing protein | - |
| L1A16_RS05335 (L1A16_05335) | 1063890..1070102 | + | 6213 | WP_000452059.1 | DEAD/DEAH box helicase family protein | - |
| L1A16_RS05340 (L1A16_05340) | 1070177..1070461 | + | 285 | WP_000969646.1 | DUF5962 family protein | - |
| L1A16_RS05345 (L1A16_05345) | 1070475..1070771 | + | 297 | WP_000998894.1 | DUF5966 family protein | - |
| L1A16_RS05350 (L1A16_05350) | 1070785..1070982 | - | 198 | WP_001841477.1 | hypothetical protein | - |
| L1A16_RS05355 (L1A16_05355) | 1071142..1071783 | + | 642 | WP_000933083.1 | hypothetical protein | - |
| L1A16_RS05360 (L1A16_05360) | 1071793..1072878 | + | 1086 | WP_000401901.1 | toprim domain-containing protein | - |
| L1A16_RS05365 (L1A16_05365) | 1072929..1073162 | + | 234 | WP_000152419.1 | DUF5965 family protein | - |
| L1A16_RS05370 (L1A16_05370) | 1073159..1073542 | + | 384 | WP_000159222.1 | DUF5945 family protein | - |
| L1A16_RS05375 (L1A16_05375) | 1073580..1073852 | + | 273 | WP_000495438.1 | hypothetical protein | - |
| L1A16_RS05380 (L1A16_05380) | 1073920..1074396 | + | 477 | WP_000579617.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| L1A16_RS05385 (L1A16_05385) | 1074396..1075154 | + | 759 | WP_000354294.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| L1A16_RS05390 (L1A16_05390) | 1075630..1076418 | + | 789 | WP_000214003.1 | hypothetical protein | - |
| L1A16_RS05395 (L1A16_05395) | 1076657..1076905 | + | 249 | WP_001814254.1 | hypothetical protein | - |
| L1A16_RS05400 (L1A16_05400) | 1077076..1077795 | + | 720 | Protein_1076 | Chloramphenicol acetyltransferase | ARG |
| L1A16_RS05405 (L1A16_05405) | 1078591..1079514 | - | 924 | WP_074189357.1 | protein rep | - |
| L1A16_RS05410 (L1A16_05410) | 1079718..1080548 | + | 831 | Protein_1078 | alpha-amylase family glycosyl hydrolase | - |
| L1A16_RS05415 (L1A16_05415) | 1080816..1081271 | + | 456 | WP_025172307.1 | hypothetical protein | - |
| L1A16_RS05420 (L1A16_05420) | 1081547..1082023 | + | 477 | WP_000579612.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| L1A16_RS05425 (L1A16_05425) | 1082023..1082781 | + | 759 | WP_000405371.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| L1A16_RS05430 (L1A16_05430) | 1083045..1083728 | + | 684 | WP_000492702.1 | LexA family transcriptional regulator | - |
| L1A16_RS05435 (L1A16_05435) | 1083731..1085146 | + | 1416 | WP_000219662.1 | Y-family DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|