MGE detailed information
MGE type: Prophage MGE length: 92773 bp
Accession: NZ_CP090838 Location: 3290163..3382935 Organism: Bacillus amyloliquefaciens strain TL106 Replicon: chromosome
Accession: NZ_CP090838 Location: 3290163..3382935 Organism: Bacillus amyloliquefaciens strain TL106 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT978_RS16010 (LT978_16005) | 3285837..3286154 | - | 318 | WP_003155816.1 | YjdJ family protein | - |
| LT978_RS16015 (LT978_16010) | 3286387..3287349 | - | 963 | WP_021734251.1 | carbohydrate kinase | - |
| LT978_RS16020 (LT978_16015) | 3287451..3288827 | - | 1377 | WP_079005211.1 | MFS transporter | - |
| LT978_RS16025 (LT978_16020) | 3288901..3289962 | - | 1062 | WP_015388610.1 | sorbitol dehydrogenase | - |
| LT978_RS16030 (LT978_16025) | 3290163..3292640 | + | 2478 | WP_139890462.1 | tetratricopeptide repeat protein | - |
| LT978_RS16035 (LT978_16030) | 3292840..3293229 | - | 390 | WP_003155825.1 | hypothetical protein | - |
| LT978_RS16040 (LT978_16035) | 3294210..3294782 | - | 573 | WP_236823017.1 | hypothetical protein | - |
| LT978_RS16045 (LT978_16040) | 3294867..3297152 | - | 2286 | WP_043866880.1 | DUF1906 domain-containing protein | - |
| LT978_RS16050 (LT978_16045) | 3297684..3297872 | + | 189 | WP_041481838.1 | hypothetical protein | - |
| LT978_RS16055 (LT978_16050) | 3297907..3298656 | - | 750 | WP_014304520.1 | DUF4065 domain-containing protein | Antitoxin Detail |
| LT978_RS16060 (LT978_16055) | 3298668..3299357 | - | 690 | WP_014304519.1 | hypothetical protein | Toxin Detail |
| LT978_RS16065 (LT978_16060) | 3299682..3300653 | - | 972 | WP_252616862.1 | hypothetical protein | VF |
| LT978_RS16070 (LT978_16065) | 3300700..3301122 | - | 423 | WP_014304517.1 | phage holin family protein | - |
| LT978_RS16075 (LT978_16070) | 3301157..3301378 | - | 222 | WP_252616864.1 | hypothetical protein | - |
| LT978_RS16080 (LT978_16075) | 3301392..3301559 | - | 168 | WP_014471524.1 | XkdX family protein | - |
| LT978_RS16085 (LT978_16080) | 3301578..3301865 | - | 288 | WP_119027021.1 | hypothetical protein | - |
| LT978_RS16090 (LT978_16085) | 3301877..3305074 | - | 3198 | WP_252616866.1 | prophage endopeptidase tail family protein | - |
| LT978_RS16095 (LT978_16090) | 3305087..3305851 | - | 765 | WP_014304512.1 | phage tail family protein | - |
| LT978_RS16100 (LT978_16095) | 3305848..3310923 | - | 5076 | WP_252616942.1 | hypothetical protein | - |
| LT978_RS16105 (LT978_16100) | 3310928..3311236 | - | 309 | WP_071348589.1 | hypothetical protein | - |
| LT978_RS16110 (LT978_16105) | 3311284..3311790 | - | 507 | WP_003155845.1 | tail assembly chaperone | - |
| LT978_RS16115 (LT978_16110) | 3311847..3312161 | - | 315 | WP_223253963.1 | fibronectin type III domain-containing protein | - |
| LT978_RS16120 (LT978_16115) | 3312103..3312435 | - | 333 | WP_076983165.1 | fibronectin type III domain-containing protein | - |
| LT978_RS16125 (LT978_16120) | 3312359..3312874 | - | 516 | WP_007408587.1 | phage major tail protein, TP901-1 family | - |
| LT978_RS16130 (LT978_16125) | 3312888..3313286 | - | 399 | WP_252616869.1 | DUF3168 domain-containing protein | - |
| LT978_RS16135 (LT978_16130) | 3313305..3313721 | - | 417 | WP_048367954.1 | HK97 gp10 family phage protein | - |
| LT978_RS16140 (LT978_16135) | 3313714..3314052 | - | 339 | WP_115996165.1 | phage head closure protein | - |
| LT978_RS16145 (LT978_16140) | 3314049..3314348 | - | 300 | WP_115996164.1 | phage head-tail connector protein | - |
| LT978_RS16150 (LT978_16145) | 3314357..3314608 | - | 252 | WP_095315821.1 | hypothetical protein | - |
| LT978_RS16155 (LT978_16150) | 3314610..3314945 | - | 336 | WP_115996163.1 | hypothetical protein | - |
| LT978_RS16160 (LT978_16155) | 3314950..3315867 | - | 918 | WP_252616870.1 | phage major capsid protein | - |
| LT978_RS16165 (LT978_16160) | 3315882..3316463 | - | 582 | WP_014304500.1 | DUF4355 domain-containing protein | - |
| LT978_RS16170 (LT978_16165) | 3316554..3316835 | - | 282 | WP_014304499.1 | hypothetical protein | - |
| LT978_RS16175 (LT978_16170) | 3316839..3317762 | - | 924 | WP_014304498.1 | phage minor head protein | - |
| LT978_RS16180 (LT978_16175) | 3317749..3319152 | - | 1404 | WP_252616871.1 | phage portal protein | - |
| LT978_RS16185 (LT978_16180) | 3319158..3320366 | - | 1209 | WP_252616944.1 | PBSX family phage terminase large subunit | - |
| LT978_RS16190 (LT978_16185) | 3320353..3321114 | - | 762 | WP_252616872.1 | phage terminase small subunit | - |
| LT978_RS16195 (LT978_16190) | 3321283..3321471 | - | 189 | WP_041481605.1 | hypothetical protein | - |
| LT978_RS16200 (LT978_16195) | 3321605..3321817 | - | 213 | WP_003155868.1 | helix-turn-helix domain-containing protein | - |
| LT978_RS16205 (LT978_16200) | 3322115..3322252 | - | 138 | WP_164848964.1 | hypothetical protein | - |
| LT978_RS16210 (LT978_16205) | 3322357..3322872 | - | 516 | WP_014304493.1 | sigma-70 family RNA polymerase sigma factor | - |
| LT978_RS20110 | 3322887..3323015 | - | 129 | WP_014304492.1 | hypothetical protein | - |
| LT978_RS16215 (LT978_16210) | 3323111..3323293 | - | 183 | WP_014304491.1 | hypothetical protein | - |
| LT978_RS16220 (LT978_16215) | 3323304..3323738 | - | 435 | WP_252616873.1 | hypothetical protein | - |
| LT978_RS16225 (LT978_16220) | 3323754..3323936 | - | 183 | WP_041481835.1 | hypothetical protein | - |
| LT978_RS16230 (LT978_16225) | 3323933..3324121 | - | 189 | WP_252616874.1 | hypothetical protein | - |
| LT978_RS16235 (LT978_16230) | 3324126..3324308 | - | 183 | WP_252616876.1 | hypothetical protein | - |
| LT978_RS16240 (LT978_16235) | 3324305..3324490 | - | 186 | WP_003155885.1 | hypothetical protein | - |
| LT978_RS16245 (LT978_16240) | 3324487..3324894 | - | 408 | WP_289781408.1 | YopX family protein | - |
| LT978_RS16250 (LT978_16245) | 3324897..3325529 | - | 633 | WP_252616878.1 | hypothetical protein | - |
| LT978_RS16255 (LT978_16250) | 3325529..3326212 | - | 684 | WP_101605423.1 | dUTP diphosphatase | - |
| LT978_RS16260 (LT978_16255) | 3326209..3326532 | - | 324 | WP_101605422.1 | hypothetical protein | - |
| LT978_RS16265 (LT978_16260) | 3326642..3327055 | - | 414 | WP_038458311.1 | hypothetical protein | - |
| LT978_RS16270 (LT978_16265) | 3327060..3327314 | - | 255 | WP_038458314.1 | hypothetical protein | - |
| LT978_RS16275 (LT978_16270) | 3327314..3327526 | - | 213 | WP_038458317.1 | hypothetical protein | - |
| LT978_RS16280 (LT978_16275) | 3327523..3327903 | - | 381 | WP_252616881.1 | hypothetical protein | - |
| LT978_RS16285 (LT978_16280) | 3328044..3328247 | - | 204 | WP_252616890.1 | XtrA/YqaO family protein | - |
| LT978_RS16290 (LT978_16285) | 3328329..3328481 | - | 153 | WP_252616892.1 | hypothetical protein | - |
| LT978_RS16295 (LT978_16290) | 3328601..3329059 | - | 459 | WP_252616893.1 | DUF1064 domain-containing protein | - |
| LT978_RS16300 (LT978_16295) | 3329046..3329510 | - | 465 | WP_252616894.1 | YopX family protein | - |
| LT978_RS16305 (LT978_16300) | 3329656..3329799 | - | 144 | WP_014304482.1 | hypothetical protein | - |
| LT978_RS16310 (LT978_16305) | 3329796..3330743 | - | 948 | WP_252616895.1 | ATP-binding protein | - |
| LT978_RS16315 (LT978_16310) | 3330628..3331344 | - | 717 | WP_252616897.1 | DnaD domain protein | - |
| LT978_RS16320 (LT978_16315) | 3331540..3332337 | - | 798 | WP_289781398.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LT978_RS16325 (LT978_16320) | 3332297..3333214 | - | 918 | WP_252616907.1 | hypothetical protein | - |
| LT978_RS16330 (LT978_16325) | 3333211..3333399 | - | 189 | WP_007408617.1 | hypothetical protein | - |
| LT978_RS16335 (LT978_16330) | 3333502..3333705 | - | 204 | WP_252616908.1 | hypothetical protein | - |
| LT978_RS16340 (LT978_16335) | 3333702..3333959 | - | 258 | WP_252616909.1 | YqaH family protein | - |
| LT978_RS16345 (LT978_16340) | 3333956..3334528 | - | 573 | WP_003155916.1 | helix-turn-helix transcriptional regulator | - |
| LT978_RS16350 (LT978_16345) | 3334586..3335314 | - | 729 | WP_252616910.1 | phage regulatory protein/antirepressor Ant | - |
| LT978_RS16355 (LT978_16350) | 3335311..3335616 | - | 306 | WP_014304473.1 | hypothetical protein | - |
| LT978_RS16360 (LT978_16355) | 3335629..3335871 | - | 243 | WP_041481827.1 | helix-turn-helix transcriptional regulator | - |
| LT978_RS16365 (LT978_16360) | 3336041..3336421 | + | 381 | WP_013351190.1 | ISNCY family transposase ISH7A | Transposase |
| LT978_RS16370 (LT978_16365) | 3336710..3337270 | + | 561 | WP_053574359.1 | DUF4352 domain-containing protein | - |
| LT978_RS16375 (LT978_16370) | 3337454..3337927 | + | 474 | WP_041481826.1 | ImmA/IrrE family metallo-endopeptidase | - |
| LT978_RS16380 (LT978_16375) | 3337939..3339150 | + | 1212 | WP_139890492.1 | IS91 family transposase ISCARN110 | Transposase |
| LT978_RS16385 (LT978_16380) | 3339435..3339623 | + | 189 | WP_041481838.1 | hypothetical protein | - |
| LT978_RS16390 (LT978_16385) | 3339658..3340407 | - | 750 | WP_014304520.1 | DUF4065 domain-containing protein | Antitoxin Detail |
| LT978_RS16395 (LT978_16390) | 3340419..3341108 | - | 690 | WP_014304519.1 | hypothetical protein | Toxin Detail |
| LT978_RS16400 (LT978_16395) | 3341433..3342404 | - | 972 | WP_252616862.1 | hypothetical protein | VF |
| LT978_RS16405 (LT978_16400) | 3342451..3342873 | - | 423 | WP_014304517.1 | phage holin family protein | - |
| LT978_RS16410 (LT978_16405) | 3342908..3343129 | - | 222 | WP_252616864.1 | hypothetical protein | - |
| LT978_RS16415 (LT978_16410) | 3343143..3343310 | - | 168 | WP_014471524.1 | XkdX family protein | - |
| LT978_RS16420 (LT978_16415) | 3343329..3343616 | - | 288 | WP_119027021.1 | hypothetical protein | - |
| LT978_RS16425 (LT978_16420) | 3343628..3346825 | - | 3198 | WP_252616866.1 | prophage endopeptidase tail family protein | - |
| LT978_RS16430 (LT978_16425) | 3346838..3347602 | - | 765 | WP_014304512.1 | phage tail family protein | - |
| LT978_RS16435 (LT978_16430) | 3347599..3352674 | - | 5076 | WP_252616942.1 | hypothetical protein | - |
| LT978_RS16440 (LT978_16435) | 3352679..3352987 | - | 309 | WP_071348589.1 | hypothetical protein | - |
| LT978_RS16445 (LT978_16440) | 3353035..3353541 | - | 507 | WP_003155845.1 | tail assembly chaperone | - |
| LT978_RS16450 (LT978_16445) | 3353598..3353912 | - | 315 | WP_223253963.1 | fibronectin type III domain-containing protein | - |
| LT978_RS16455 (LT978_16450) | 3353854..3354186 | - | 333 | WP_076983165.1 | fibronectin type III domain-containing protein | - |
| LT978_RS16460 (LT978_16455) | 3354110..3354625 | - | 516 | WP_007408587.1 | phage major tail protein, TP901-1 family | - |
| LT978_RS16465 (LT978_16460) | 3354639..3355037 | - | 399 | WP_252616869.1 | DUF3168 domain-containing protein | - |
| LT978_RS16470 (LT978_16465) | 3355056..3355472 | - | 417 | WP_048367954.1 | HK97 gp10 family phage protein | - |
| LT978_RS16475 (LT978_16470) | 3355465..3355803 | - | 339 | WP_115996165.1 | phage head closure protein | - |
| LT978_RS16480 (LT978_16475) | 3355800..3356099 | - | 300 | WP_115996164.1 | phage head-tail connector protein | - |
| LT978_RS16485 (LT978_16480) | 3356108..3356359 | - | 252 | WP_095315821.1 | hypothetical protein | - |
| LT978_RS16490 (LT978_16485) | 3356361..3356696 | - | 336 | WP_115996163.1 | hypothetical protein | - |
| LT978_RS16495 (LT978_16490) | 3356701..3357618 | - | 918 | WP_252616870.1 | phage major capsid protein | - |
| LT978_RS16500 (LT978_16495) | 3357633..3358214 | - | 582 | WP_014304500.1 | DUF4355 domain-containing protein | - |
| LT978_RS16505 (LT978_16500) | 3358305..3358586 | - | 282 | WP_014304499.1 | hypothetical protein | - |
| LT978_RS16510 (LT978_16505) | 3358590..3359513 | - | 924 | WP_014304498.1 | phage minor head protein | - |
| LT978_RS16515 (LT978_16510) | 3359500..3360903 | - | 1404 | WP_252616871.1 | phage portal protein | - |
| LT978_RS16520 (LT978_16515) | 3360909..3362117 | - | 1209 | WP_252616944.1 | PBSX family phage terminase large subunit | - |
| LT978_RS16525 (LT978_16520) | 3362104..3362865 | - | 762 | WP_252616872.1 | phage terminase small subunit | - |
| LT978_RS16530 (LT978_16525) | 3363034..3363222 | - | 189 | WP_041481605.1 | hypothetical protein | - |
| LT978_RS16535 (LT978_16530) | 3363356..3363568 | - | 213 | WP_003155868.1 | helix-turn-helix domain-containing protein | - |
| LT978_RS16540 (LT978_16535) | 3363866..3364003 | - | 138 | WP_164848964.1 | hypothetical protein | - |
| LT978_RS16545 (LT978_16540) | 3364108..3364623 | - | 516 | WP_014304493.1 | sigma-70 family RNA polymerase sigma factor | - |
| LT978_RS20115 | 3364638..3364766 | - | 129 | WP_014304492.1 | hypothetical protein | - |
| LT978_RS16550 (LT978_16545) | 3364862..3365044 | - | 183 | WP_014304491.1 | hypothetical protein | - |
| LT978_RS16555 (LT978_16550) | 3365055..3365489 | - | 435 | WP_252616873.1 | hypothetical protein | - |
| LT978_RS16560 (LT978_16555) | 3365505..3365687 | - | 183 | WP_041481835.1 | hypothetical protein | - |
| LT978_RS16565 (LT978_16560) | 3365684..3365872 | - | 189 | WP_252616874.1 | hypothetical protein | - |
| LT978_RS16570 (LT978_16565) | 3365877..3366059 | - | 183 | WP_252616876.1 | hypothetical protein | - |
| LT978_RS16575 (LT978_16570) | 3366056..3366241 | - | 186 | WP_003155885.1 | hypothetical protein | - |
| LT978_RS16580 (LT978_16575) | 3366238..3366645 | - | 408 | WP_289781408.1 | YopX family protein | - |
| LT978_RS16585 (LT978_16580) | 3366648..3367280 | - | 633 | WP_252616878.1 | hypothetical protein | - |
| LT978_RS16590 (LT978_16585) | 3367280..3367963 | - | 684 | WP_101605423.1 | dUTP diphosphatase | - |
| LT978_RS16595 (LT978_16590) | 3367960..3368283 | - | 324 | WP_101605422.1 | hypothetical protein | - |
| LT978_RS16600 (LT978_16595) | 3368393..3368806 | - | 414 | WP_252616946.1 | hypothetical protein | - |
| LT978_RS16605 (LT978_16600) | 3368813..3369064 | - | 252 | Protein_3277 | hypothetical protein | - |
| LT978_RS16610 (LT978_16605) | 3369248..3369649 | - | 402 | WP_252616911.1 | hypothetical protein | - |
| LT978_RS16615 (LT978_16610) | 3369790..3369993 | - | 204 | WP_252616890.1 | XtrA/YqaO family protein | - |
| LT978_RS16620 (LT978_16615) | 3370075..3370227 | - | 153 | WP_252616892.1 | hypothetical protein | - |
| LT978_RS16625 (LT978_16620) | 3370347..3370805 | - | 459 | WP_252616893.1 | DUF1064 domain-containing protein | - |
| LT978_RS16630 (LT978_16625) | 3370792..3371256 | - | 465 | WP_252616894.1 | YopX family protein | - |
| LT978_RS16635 (LT978_16630) | 3371402..3371545 | - | 144 | WP_014304482.1 | hypothetical protein | - |
| LT978_RS16640 (LT978_16635) | 3371542..3372489 | - | 948 | WP_252616895.1 | ATP-binding protein | - |
| LT978_RS16645 (LT978_16640) | 3372374..3373090 | - | 717 | WP_252616897.1 | DnaD domain protein | - |
| LT978_RS16650 (LT978_16645) | 3373286..3374083 | - | 798 | WP_289781398.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LT978_RS16655 (LT978_16650) | 3374043..3374960 | - | 918 | WP_252616907.1 | hypothetical protein | - |
| LT978_RS16660 (LT978_16655) | 3374957..3375145 | - | 189 | WP_007408617.1 | hypothetical protein | - |
| LT978_RS16665 (LT978_16660) | 3375248..3375451 | - | 204 | WP_252616908.1 | hypothetical protein | - |
| LT978_RS16670 (LT978_16665) | 3375448..3375705 | - | 258 | WP_252616909.1 | YqaH family protein | - |
| LT978_RS16675 (LT978_16670) | 3375702..3376274 | - | 573 | WP_003155916.1 | helix-turn-helix transcriptional regulator | - |
| LT978_RS16680 (LT978_16675) | 3376332..3377060 | - | 729 | WP_252616910.1 | phage regulatory protein/antirepressor Ant | - |
| LT978_RS16685 (LT978_16680) | 3377057..3377362 | - | 306 | WP_014304473.1 | hypothetical protein | - |
| LT978_RS16690 (LT978_16685) | 3377375..3377617 | - | 243 | WP_041481827.1 | helix-turn-helix transcriptional regulator | - |
| LT978_RS16695 (LT978_16690) | 3377787..3378167 | + | 381 | WP_013351190.1 | ISNCY family transposase ISH7A | Transposase |
| LT978_RS16700 (LT978_16695) | 3378456..3379016 | + | 561 | WP_053574359.1 | DUF4352 domain-containing protein | - |
| LT978_RS16705 (LT978_16700) | 3379200..3379673 | + | 474 | WP_041481826.1 | ImmA/IrrE family metallo-endopeptidase | - |
| LT978_RS16710 (LT978_16705) | 3379685..3380896 | + | 1212 | WP_139890492.1 | IS91 family transposase ISCARN110 | Transposase |
| LT978_RS16715 (LT978_16710) | 3380975..3382609 | - | 1635 | WP_003155941.1 | 60 kDa chaperonin | VF |
| LT978_RS16720 (LT978_16715) | 3382651..3382935 | - | 285 | WP_003155970.1 | co-chaperone GroES | - |
| LT978_RS16725 (LT978_16720) | 3383172..3383906 | + | 735 | WP_003155972.1 | type II CAAX endopeptidase family protein | - |
| LT978_RS16730 (LT978_16725) | 3383903..3384094 | + | 192 | WP_003155975.1 | YdiK family protein | - |
| LT978_RS16735 (LT978_16730) | 3384136..3384894 | - | 759 | WP_088005343.1 | twin-arginine translocase subunit TatC | - |
| LT978_RS16740 (LT978_16735) | 3384901..3385071 | - | 171 | WP_003155981.1 | twin-arginine translocase TatA/TatE family subunit | - |
| LT978_RS16745 (LT978_16740) | 3385090..3385737 | - | 648 | WP_252616912.1 | redox-sensing transcriptional repressor Rex | - |
| LT978_RS16750 (LT978_16745) | 3385734..3386246 | - | 513 | WP_003155986.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|