MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33309 bp
Accession: NZ_CP090574 Location: 1..33309 Organism: Escherichia coli strain BY63 Replicon: plasmid pBY63-4
Accession: NZ_CP090574 Location: 1..33309 Organism: Escherichia coli strain BY63 Replicon: plasmid pBY63-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZE53_RS24680 (LZE53_24590) | 282..809 | - | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| LZE53_RS24685 (LZE53_24595) | 944..1348 | - | 405 | WP_012421203.1 | hypothetical protein | - |
| LZE53_RS24690 (LZE53_24600) | 1361..2227 | - | 867 | WP_001353743.1 | replication initiation protein | - |
| LZE53_RS24695 (LZE53_24605) | 3642..4157 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| LZE53_RS24700 (LZE53_24610) | 4262..4804 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| LZE53_RS24705 (LZE53_24615) | 4801..5052 | + | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| LZE53_RS24710 (LZE53_24620) | 5039..5266 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| LZE53_RS24715 (LZE53_24625) | 5720..6019 | + | 300 | WP_000650309.1 | hypothetical protein | - |
| LZE53_RS24720 (LZE53_24630) | 6110..6460 | + | 351 | WP_000854259.1 | hypothetical protein | - |
| LZE53_RS24725 (LZE53_24635) | 6765..7013 | + | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LZE53_RS24730 (LZE53_24640) | 7010..7357 | + | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LZE53_RS24735 (LZE53_24645) | 7718..8221 | + | 504 | WP_000781813.1 | relaxosome-coupling protein TaxA | - |
| LZE53_RS24740 (LZE53_24650) | 8225..9454 | + | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| LZE53_RS24745 (LZE53_24655) | 9531..9824 | + | 294 | WP_060598542.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| LZE53_RS24750 (LZE53_24660) | 9821..10036 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| LZE53_RS24755 (LZE53_24665) | 10392..11012 | + | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| LZE53_RS24760 (LZE53_24670) | 11026..11352 | + | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| LZE53_RS24765 (LZE53_24675) | 11371..14118 | + | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| LZE53_RS24770 (LZE53_24680) | 14130..14846 | + | 717 | WP_000832283.1 | type IV secretion system protein | - |
| LZE53_RS24775 (LZE53_24685) | 14858..15952 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| LZE53_RS24780 (LZE53_24690) | 16467..17153 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| LZE53_RS24785 (LZE53_24695) | 17150..18058 | + | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| LZE53_RS24790 (LZE53_24700) | 18051..19169 | + | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| LZE53_RS24795 (LZE53_24705) | 19171..20199 | + | 1029 | WP_000017226.1 | Type IV secretion system protein VirB11 | VF |
| LZE53_RS24800 (LZE53_24710) | 20186..22048 | + | 1863 | WP_170324155.1 | relaxosome-coupling protein TaxB | - |
| LZE53_RS24805 (LZE53_24715) | 22057..22479 | + | 423 | WP_015059903.1 | cag pathogenicity island Cag12 family protein | - |
| LZE53_RS24810 (LZE53_24720) | 22463..22768 | + | 306 | WP_001350475.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LZE53_RS24815 (LZE53_24725) | 22881..23075 | + | 195 | Protein_27 | ATP-binding protein | - |
| LZE53_RS24820 (LZE53_24730) | 23079..23651 | + | 573 | WP_001198960.1 | hypothetical protein | - |
| LZE53_RS24825 (LZE53_24735) | 23656..25809 | + | 2154 | WP_001235745.1 | type IA DNA topoisomerase | - |
| LZE53_RS24830 (LZE53_24740) | 25806..26012 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| LZE53_RS24835 (LZE53_24745) | 26030..26494 | + | 465 | WP_001293134.1 | H-NS family nucleoid-associated regulatory protein | - |
| LZE53_RS24840 (LZE53_24750) | 26581..27285 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LZE53_RS24845 | 28068..28163 | + | 96 | WP_021534057.1 | DinQ-like type I toxin DqlB | - |
| LZE53_RS24850 (LZE53_24755) | 28826..29473 | + | 648 | WP_000587671.1 | division plane positioning ATPase MipZ | - |
| LZE53_RS24855 (LZE53_24760) | 29548..29817 | + | 270 | WP_001086090.1 | hypothetical protein | - |
| LZE53_RS24860 (LZE53_24765) | 29978..30607 | + | 630 | WP_223424520.1 | DUF2806 domain-containing protein | - |
| LZE53_RS24865 (LZE53_24770) | 30781..32406 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| LZE53_RS24870 (LZE53_24775) | 32478..33200 | + | 723 | WP_159197015.1 | PAP2 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|