MGE detailed information
MGE type: Genomic_island MGE length: 23707 bp
Accession: NZ_CP090561 Location: 201281..224987 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2530 Replicon: chromosome
Accession: NZ_CP090561 Location: 201281..224987 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2530 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGM68_RS00835 (LGM68_00830) | 196428..196703 | + | 276 | Protein_163 | avirulence protein | - |
| LGM68_RS00840 (LGM68_00835) | 196815..199997 | - | 3183 | WP_095702033.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| LGM68_RS00845 (LGM68_00840) | 200255..200763 | - | 509 | Protein_165 | hypothetical protein | - |
| LGM68_RS00850 (LGM68_00845) | 200762..201094 | + | 333 | WP_078566249.1 | hypothetical protein | - |
| LGM68_RS00855 (LGM68_00850) | 201281..201670 | - | 390 | WP_078566250.1 | hypothetical protein | - |
| LGM68_RS00860 (LGM68_00855) | 201803..202018 | - | 216 | WP_160168843.1 | hypothetical protein | - |
| LGM68_RS00865 (LGM68_00860) | 202327..202617 | + | 291 | WP_003490957.1 | hypothetical protein | - |
| LGM68_RS00870 (LGM68_00865) | 202638..203015 | + | 378 | WP_078566251.1 | TrbC/VirB2 family protein | - |
| LGM68_RS00875 (LGM68_00870) | 203012..203311 | + | 300 | WP_269339648.1 | VirB3 family type IV secretion system protein | - |
| LGM68_RS00880 (LGM68_00875) | 203334..205967 | + | 2634 | Protein_172 | hypothetical protein | VF |
| LGM68_RS00885 (LGM68_00880) | 205964..206632 | + | 669 | WP_269339649.1 | type IV secretion system protein | - |
| LGM68_RS00890 (LGM68_00885) | 206680..206892 | + | 213 | WP_005931790.1 | hypothetical protein | - |
| LGM68_RS00895 (LGM68_00890) | 206885..207265 | + | 381 | WP_269339650.1 | hypothetical protein | - |
| LGM68_RS00900 (LGM68_00895) | 207267..208133 | + | 867 | WP_078566252.1 | type IV secretion system protein | - |
| LGM68_RS00905 (LGM68_00900) | 208130..208804 | + | 675 | WP_003490888.1 | type IV secretion system protein | - |
| LGM68_RS00910 (LGM68_00905) | 208829..209611 | + | 783 | WP_011052985.1 | hypothetical protein | VF |
| LGM68_RS00915 (LGM68_00910) | 209613..210833 | + | 1221 | WP_269356279.1 | hypothetical protein | VF |
| LGM68_RS00920 (LGM68_00915) | 210844..211866 | + | 1023 | WP_269356281.1 | hypothetical protein | VF |
| LGM68_RS00925 (LGM68_00920) | 211877..212746 | + | 870 | WP_269357482.1 | hypothetical protein | VF |
| LGM68_RS00930 (LGM68_00925) | 212872..213291 | + | 420 | WP_078566256.1 | hypothetical protein | - |
| LGM68_RS00935 (LGM68_00930) | 213368..213754 | + | 387 | WP_003491149.1 | hypothetical protein | - |
| LGM68_RS00940 (LGM68_00935) | 213945..214115 | + | 171 | WP_017157755.1 | antitoxin MazE family protein | Antitoxin Detail |
| LGM68_RS00945 (LGM68_00940) | 214112..214438 | + | 327 | WP_003491151.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LGM68_RS00950 (LGM68_00945) | 214507..217486 | - | 2980 | Protein_186 | conjugative relaxase | - |
| LGM68_RS00955 (LGM68_00950) | 217500..219074 | - | 1575 | WP_269356283.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LGM68_RS00960 (LGM68_00955) | 219078..219251 | - | 174 | Protein_188 | hypothetical protein | - |
| LGM68_RS00965 (LGM68_00960) | 219251..219646 | - | 396 | WP_269356285.1 | conjugal transfer protein TraA | - |
| LGM68_RS00970 (LGM68_00965) | 220005..220451 | + | 447 | WP_017160486.1 | hypothetical protein | - |
| LGM68_RS00975 (LGM68_00970) | 220460..221155 | + | 696 | WP_269356287.1 | StbB family protein | - |
| LGM68_RS00980 (LGM68_00975) | 221203..221556 | + | 354 | WP_269356288.1 | hypothetical protein | - |
| LGM68_RS00985 (LGM68_00980) | 221694..221975 | - | 282 | WP_017158383.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| LGM68_RS00990 (LGM68_00985) | 221962..222231 | - | 270 | WP_017158384.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LGM68_RS00995 (LGM68_00990) | 222697..222933 | - | 237 | Protein_195 | resolvase | - |
| LGM68_RS01000 (LGM68_00995) | 223501..224733 | - | 1233 | Protein_196 | IS256 family transposase ISXax1 | Transposase |
| LGM68_RS01005 (LGM68_01000) | 224984..225415 | - | 432 | WP_017170141.1 | recombinase family protein | - |
| LGM68_RS01010 (LGM68_01005) | 225685..225853 | - | 169 | Protein_198 | KfrA protein | - |
| LGM68_RS01015 (LGM68_01010) | 225967..226248 | - | 282 | WP_269339658.1 | CopG family transcriptional regulator | - |
| LGM68_RS01020 (LGM68_01015) | 226272..226922 | - | 651 | WP_223304348.1 | AAA family ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|