MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP090545 Location: 1108284..1118710 Organism: Salmonella enterica strain 2017028-SE Replicon: chromosome
Accession: NZ_CP090545 Location: 1108284..1118710 Organism: Salmonella enterica strain 2017028-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F57_RS05345 (1103397) | 1103397..1103777 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| L0F57_RS05350 (1103833) | 1103833..1106400 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| L0F57_RS05355 (1106559) | 1106559..1107080 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| L0F57_RS05360 (1107252) | 1107252..1107908 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| L0F57_RS05365 (1108255) | 1108255..1108460 | + | 206 | Protein_1055 | IS5 family transposase ISEcl3 | Transposase |
| L0F57_RS05370 (1108533) | 1108533..1109060 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| L0F57_RS05375 (1109057) | 1109057..1109347 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| L0F57_RS05380 (1109617) | 1109617..1109795 | - | 179 | Protein_1058 | IS3 family transposase | - |
| L0F57_RS05385 (1110036) | 1110036..1110362 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| L0F57_RS05390 (1110635) | 1110635..1110982 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| L0F57_RS05395 (1110967) | 1110967..1111416 | - | 450 | WP_000381610.1 | membrane protein | - |
| L0F57_RS05400 (1111847) | 1111847..1112290 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| L0F57_RS05405 (1112747) | 1112747..1113397 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| L0F57_RS05410 (1113394) | 1113394..1115082 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| L0F57_RS05415 (1115079) | 1115079..1116197 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| L0F57_RS05420 (1116222) | 1116222..1118279 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| L0F57_RS05425 (1118303) | 1118303..1118710 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| L0F57_RS05430 (1118707) | 1118707..1120002 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| L0F57_RS05435 (1119980) | 1119980..1120423 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| L0F57_RS05440 (1120423) | 1120423..1121433 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| L0F57_RS05445 (1121433) | 1121433..1122344 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| L0F57_RS05450 (1122334) | 1122334..1123008 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| L0F57_RS05455 (1123034) | 1123034..1123294 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |