MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP090541 Location: 2446245..2458330 Organism: Salmonella enterica strain 2010112-SE Replicon: chromosome
Accession: NZ_CP090541 Location: 2446245..2458330 Organism: Salmonella enterica strain 2010112-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F62_RS11960 (2442166) | 2442166..2443368 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| L0F62_RS11965 (2443381) | 2443381..2444832 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| L0F62_RS11970 (2444976) | 2444976..2445983 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| L0F62_RS11975 (2446242) | 2446242..2447708 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| L0F62_RS11980 (2448516) | 2448516..2449230 | + | 715 | Protein_2346 | helix-turn-helix domain-containing protein | - |
| L0F62_RS11985 (2449286) | 2449286..2450194 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| L0F62_RS11990 (2450337) | 2450337..2450669 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| L0F62_RS11995 (2450659) | 2450659..2450874 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| L0F62_RS12000 (2451026) | 2451026..2451274 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| L0F62_RS12005 (2451264) | 2451264..2451548 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L0F62_RS12010 (2451719) | 2451719..2452108 | + | 390 | WP_000194089.1 | RidA family protein | - |
| L0F62_RS12015 (2452160) | 2452160..2453239 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| L0F62_RS12020 (2453432) | 2453432..2453920 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| L0F62_RS12025 (2453965) | 2453965..2455473 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| L0F62_RS12030 (2455463) | 2455463..2456704 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| L0F62_RS12035 (2456774) | 2456774..2458330 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| L0F62_RS12040 (2458507) | 2458507..2459793 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| L0F62_RS12045 (2459768) | 2459768..2460793 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| L0F62_RS12050 (2460852) | 2460852..2461643 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| L0F62_RS12055 (2461689) | 2461689..2462780 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |