MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP090539 Location: 1108368..1118794 Organism: Salmonella enterica strain 2016062-SE Replicon: chromosome
Accession: NZ_CP090539 Location: 1108368..1118794 Organism: Salmonella enterica strain 2016062-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F59_RS05350 (1103481) | 1103481..1103861 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| L0F59_RS05355 (1103917) | 1103917..1106484 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| L0F59_RS05360 (1106643) | 1106643..1107164 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| L0F59_RS05365 (1107336) | 1107336..1107992 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| L0F59_RS05370 (1108339) | 1108339..1108544 | + | 206 | Protein_1056 | IS5 family transposase ISEcl3 | Transposase |
| L0F59_RS05375 (1108617) | 1108617..1109144 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| L0F59_RS05380 (1109141) | 1109141..1109431 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| L0F59_RS05385 (1109701) | 1109701..1109879 | - | 179 | Protein_1059 | IS3 family transposase | - |
| L0F59_RS05390 (1110120) | 1110120..1110446 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| L0F59_RS05395 (1110719) | 1110719..1111066 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| L0F59_RS05400 (1111051) | 1111051..1111500 | - | 450 | WP_000381610.1 | membrane protein | - |
| L0F59_RS05405 (1111931) | 1111931..1112374 | - | 444 | WP_000715092.1 | putative ABC transporter-binding protein | VF |
| L0F59_RS05410 (1112831) | 1112831..1113481 | + | 651 | WP_001674874.1 | hypothetical protein | VF |
| L0F59_RS05415 (1113478) | 1113478..1115166 | + | 1689 | WP_000848113.1 | hypothetical protein | VF |
| L0F59_RS05420 (1115163) | 1115163..1116281 | + | 1119 | WP_000612171.1 | hypothetical protein | VF |
| L0F59_RS05425 (1116306) | 1116306..1118363 | + | 2058 | WP_000927219.1 | hypothetical protein | VF |
| L0F59_RS05430 (1118387) | 1118387..1118794 | + | 408 | WP_001164066.1 | Cold shock protein CspV | VF |
| L0F59_RS05435 (1118791) | 1118791..1120086 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| L0F59_RS05440 (1120064) | 1120064..1120507 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| L0F59_RS05445 (1120507) | 1120507..1121517 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| L0F59_RS05450 (1121517) | 1121517..1122428 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| L0F59_RS05455 (1122418) | 1122418..1123092 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| L0F59_RS05460 (1123118) | 1123118..1123378 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |