MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP090535 Location: 2462207..2474292 Organism: Salmonella enterica strain 2016089-SE Replicon: chromosome
Accession: NZ_CP090535 Location: 2462207..2474292 Organism: Salmonella enterica strain 2016089-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F58_RS12050 (2458128) | 2458128..2459330 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| L0F58_RS12055 (2459343) | 2459343..2460794 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| L0F58_RS12060 (2460938) | 2460938..2461945 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| L0F58_RS12065 (2462204) | 2462204..2463670 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| L0F58_RS12070 (2464478) | 2464478..2465192 | + | 715 | Protein_2366 | helix-turn-helix domain-containing protein | - |
| L0F58_RS12075 (2465248) | 2465248..2466156 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| L0F58_RS12080 (2466299) | 2466299..2466631 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| L0F58_RS12085 (2466621) | 2466621..2466836 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| L0F58_RS12090 (2466988) | 2466988..2467236 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| L0F58_RS12095 (2467226) | 2467226..2467510 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L0F58_RS12100 (2467681) | 2467681..2468070 | + | 390 | WP_000194089.1 | RidA family protein | - |
| L0F58_RS12105 (2468122) | 2468122..2469201 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| L0F58_RS12110 (2469394) | 2469394..2469882 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| L0F58_RS12115 (2469927) | 2469927..2471435 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| L0F58_RS12120 (2471425) | 2471425..2472666 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| L0F58_RS12125 (2472736) | 2472736..2474292 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| L0F58_RS12130 (2474469) | 2474469..2475755 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| L0F58_RS12135 (2475730) | 2475730..2476755 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| L0F58_RS12140 (2476814) | 2476814..2477605 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| L0F58_RS12145 (2477651) | 2477651..2478742 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |