MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP090529 Location: 2482300..2494385 Organism: Salmonella enterica strain 2008079-SE Replicon: chromosome
Accession: NZ_CP090529 Location: 2482300..2494385 Organism: Salmonella enterica strain 2008079-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F60_RS12180 (2478221) | 2478221..2479423 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| L0F60_RS12185 (2479436) | 2479436..2480887 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| L0F60_RS12190 (2481031) | 2481031..2482038 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| L0F60_RS12195 (2482297) | 2482297..2483763 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| L0F60_RS12200 (2484571) | 2484571..2485285 | + | 715 | Protein_2395 | helix-turn-helix domain-containing protein | - |
| L0F60_RS12205 (2485341) | 2485341..2486249 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| L0F60_RS12210 (2486392) | 2486392..2486724 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| L0F60_RS12215 (2486714) | 2486714..2486929 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| L0F60_RS12220 (2487081) | 2487081..2487329 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| L0F60_RS12225 (2487319) | 2487319..2487603 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L0F60_RS12230 (2487774) | 2487774..2488163 | + | 390 | WP_000194089.1 | RidA family protein | - |
| L0F60_RS12235 (2488215) | 2488215..2489294 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| L0F60_RS12240 (2489487) | 2489487..2489975 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| L0F60_RS12245 (2490020) | 2490020..2491528 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| L0F60_RS12250 (2491518) | 2491518..2492759 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| L0F60_RS12255 (2492829) | 2492829..2494385 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| L0F60_RS12260 (2494562) | 2494562..2495848 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| L0F60_RS12265 (2495823) | 2495823..2496848 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| L0F60_RS12270 (2496907) | 2496907..2497698 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| L0F60_RS12275 (2497744) | 2497744..2498835 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |