MGE detailed information
MGE type: Prophage MGE length: 42912 bp
Accession: NZ_CP090518 Location: 1393447..1436358 Organism: Xylella fastidiosa subsp. fastidiosa strain Stag's Leap Replicon: chromosome
Accession: NZ_CP090518 Location: 1393447..1436358 Organism: Xylella fastidiosa subsp. fastidiosa strain Stag's Leap Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ752_RS06310 (LZ752_06310) | 1389453..1390031 | - | 579 | WP_011097981.1 | glutathione peroxidase | - |
| LZ752_RS06315 (LZ752_06315) | 1390789..1391664 | + | 876 | WP_004087352.1 | ABC transporter ATP-binding protein | - |
| LZ752_RS06320 (LZ752_06320) | 1391661..1392638 | + | 978 | WP_004087353.1 | hypothetical protein | - |
| LZ752_RS06325 (LZ752_06325) | 1392897..1393343 | + | 447 | WP_004087355.1 | hypothetical protein | - |
| LZ752_RS06330 (LZ752_06330) | 1393447..1394691 | - | 1245 | WP_011097983.1 | tail fiber protein | - |
| LZ752_RS06335 (LZ752_06335) | 1394695..1395255 | - | 561 | WP_004084996.1 | DUF2612 domain-containing protein | - |
| LZ752_RS06340 (LZ752_06340) | 1395252..1396397 | - | 1146 | WP_061278117.1 | baseplate J/gp47 family protein | - |
| LZ752_RS06345 (LZ752_06345) | 1396496..1396792 | + | 297 | WP_004089252.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LZ752_RS06350 (LZ752_06350) | 1396796..1397101 | + | 306 | WP_004089254.1 | putative addiction module antidote protein | Antitoxin Detail |
| LZ752_RS06355 (LZ752_06355) | 1397112..1397465 | - | 354 | WP_011097986.1 | hypothetical protein | - |
| LZ752_RS06360 (LZ752_06360) | 1397462..1398103 | - | 642 | WP_004090764.1 | Gp138 family membrane-puncturing spike protein | - |
| LZ752_RS06365 (LZ752_06365) | 1398100..1398309 | - | 210 | WP_234552888.1 | hypothetical protein | - |
| LZ752_RS06370 (LZ752_06370) | 1398306..1398929 | - | 624 | WP_234552889.1 | hypothetical protein | - |
| LZ752_RS06375 (LZ752_06375) | 1398926..1399243 | - | 318 | WP_011097873.1 | hypothetical protein | - |
| LZ752_RS06380 (LZ752_06380) | 1399243..1400013 | - | 771 | WP_004090769.1 | hypothetical protein | - |
| LZ752_RS06385 (LZ752_06385) | 1400124..1400351 | + | 228 | WP_004091377.1 | DUF6290 family protein | Antitoxin Detail |
| LZ752_RS06390 (LZ752_06390) | 1400335..1400601 | + | 267 | WP_011097988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LZ752_RS06395 (LZ752_06395) | 1400612..1402060 | - | 1449 | WP_234552890.1 | hypothetical protein | - |
| LZ752_RS06400 (LZ752_06400) | 1401985..1402620 | - | 636 | WP_234552891.1 | hypothetical protein | - |
| LZ752_RS06405 (LZ752_06405) | 1402647..1403069 | - | 423 | WP_011097875.1 | putative phage tail assembly chaperone | - |
| LZ752_RS06410 (LZ752_06410) | 1403066..1403503 | - | 438 | WP_011097876.1 | DUF3277 family protein | - |
| LZ752_RS06415 (LZ752_06415) | 1403513..1403746 | - | 234 | WP_061278122.1 | DUF3383 family protein | - |
| LZ752_RS06420 (LZ752_06420) | 1403763..1404641 | - | 879 | WP_012382645.1 | IS607 family transposase ISCARN56 | Transposase |
| LZ752_RS06425 (LZ752_06425) | 1404807..1404968 | - | 162 | WP_014607806.1 | IS607 family transposase ISCARN56 | Transposase |
| LZ752_RS06430 (LZ752_06430) | 1404962..1405567 | - | 606 | Protein_1247 | IS607 family transposase | - |
| LZ752_RS06435 (LZ752_06435) | 1405560..1406177 | + | 618 | WP_014607809.1 | truncated phage-related DNA polymerase | - |
| LZ752_RS06440 (LZ752_06440) | 1406174..1406452 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| LZ752_RS06445 (LZ752_06445) | 1406454..1406816 | - | 363 | WP_012382646.1 | hypothetical protein | - |
| LZ752_RS06450 (LZ752_06450) | 1406901..1408319 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| LZ752_RS06455 (LZ752_06455) | 1408316..1408480 | + | 165 | WP_012382647.1 | hypothetical protein | - |
| LZ752_RS06460 (LZ752_06460) | 1408473..1408730 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| LZ752_RS06465 (LZ752_06465) | 1408720..1409739 | + | 1020 | WP_011097994.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LZ752_RS06470 (LZ752_06470) | 1409806..1411743 | - | 1938 | WP_004088646.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| LZ752_RS06475 (LZ752_06475) | 1411905..1414286 | + | 2382 | WP_011097995.1 | TonB-dependent receptor | - |
| LZ752_RS06480 (LZ752_06480) | 1414376..1415044 | - | 669 | WP_004088644.1 | DsbA family oxidoreductase | - |
| LZ752_RS06485 (LZ752_06485) | 1415669..1418035 | + | 2367 | WP_011097996.1 | TonB-dependent receptor | - |
| LZ752_RS06490 (LZ752_06490) | 1419057..1420775 | + | 1719 | WP_011097997.1 | YbaL family putative K(+) efflux transporter | - |
| LZ752_RS06495 (LZ752_06495) | 1421150..1422244 | + | 1095 | WP_004086092.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| LZ752_RS06500 (LZ752_06500) | 1422356..1423330 | + | 975 | WP_004086093.1 | phosphate ABC transporter permease subunit PstC | - |
| LZ752_RS06505 (LZ752_06505) | 1423330..1424193 | + | 864 | WP_004086094.1 | phosphate ABC transporter permease PstA | - |
| LZ752_RS06510 (LZ752_06510) | 1424214..1425044 | + | 831 | WP_011097998.1 | Phosphate import ATP-binding protein PstB | VF |
| LZ752_RS06515 (LZ752_06515) | 1425062..1425784 | + | 723 | WP_004086097.1 | phosphate signaling complex protein PhoU | - |
| LZ752_RS06520 (LZ752_06520) | 1426006..1426638 | + | 633 | WP_004086100.1 | ribonuclease T | - |
| LZ752_RS06525 (LZ752_06525) | 1427120..1427917 | + | 798 | WP_011098000.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| LZ752_RS06530 (LZ752_06530) | 1427954..1428337 | + | 384 | WP_004086104.1 | Co2+/Mg2+ efflux protein ApaG | - |
| LZ752_RS06535 (LZ752_06535) | 1428352..1429239 | + | 888 | WP_011098001.1 | symmetrical bis(5'-nucleosyl)-tetraphosphatase | - |
| LZ752_RS06540 (LZ752_06540) | 1429783..1431057 | + | 1275 | WP_004088628.1 | lipase family protein | - |
| LZ752_RS06545 (LZ752_06545) | 1431287..1432036 | - | 750 | WP_004088627.1 | 3-deoxy-D-manno-octulosonic acid kinase | VF |
| LZ752_RS06550 (LZ752_06550) | 1432058..1433110 | + | 1053 | WP_004088625.1 | Lipopolysaccharide core heptosyltransferase RfaQ | VF |
| LZ752_RS06555 (LZ752_06555) | 1433128..1433535 | - | 408 | WP_011098003.1 | DUF6165 family protein | - |
| LZ752_RS06565 (LZ752_06565) | 1434420..1435112 | + | 693 | WP_011098004.1 | serine/threonine-protein phosphatase | - |
| LZ752_RS06570 (LZ752_06570) | 1435190..1435909 | - | 720 | WP_004088619.1 | DNA polymerase III subunit epsilon | - |
| LZ752_RS06575 (LZ752_06575) | 1435906..1436358 | - | 453 | WP_004088617.1 | ribonuclease HI | - |
| LZ752_RS06580 (LZ752_06580) | 1436372..1437022 | - | 651 | WP_004088616.1 | hypothetical protein | - |
| LZ752_RS06585 (LZ752_06585) | 1437034..1437810 | + | 777 | WP_011098005.1 | hydroxyacylglutathione hydrolase | - |
| LZ752_RS06590 (LZ752_06590) | 1438169..1438357 | + | 189 | WP_228762627.1 | EexN family lipoprotein | - |
| LZ752_RS06595 (LZ752_06595) | 1439203..1439430 | + | 228 | WP_004088610.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|