MGE detailed information
MGE type: Prophage MGE length: 42915 bp
Accession: NZ_CP090514 Location: 1382161..1425075 Organism: Xylella fastidiosa subsp. fastidiosa strain Riv13 Replicon: chromosome
Accession: NZ_CP090514 Location: 1382161..1425075 Organism: Xylella fastidiosa subsp. fastidiosa strain Riv13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ753_RS06220 (LZ753_06220) | 1378167..1378745 | - | 579 | WP_011097981.1 | glutathione peroxidase | - |
| LZ753_RS06225 (LZ753_06225) | 1379503..1380378 | + | 876 | WP_004087352.1 | ABC transporter ATP-binding protein | - |
| LZ753_RS06230 (LZ753_06230) | 1380375..1381352 | + | 978 | WP_004087353.1 | hypothetical protein | - |
| LZ753_RS06235 (LZ753_06235) | 1381611..1382057 | + | 447 | WP_004087355.1 | hypothetical protein | - |
| LZ753_RS06240 (LZ753_06240) | 1382161..1383405 | - | 1245 | WP_011097983.1 | tail fiber protein | - |
| LZ753_RS06245 (LZ753_06245) | 1383409..1383969 | - | 561 | WP_011097869.1 | DUF2612 domain-containing protein | - |
| LZ753_RS06250 (LZ753_06250) | 1383966..1385111 | - | 1146 | WP_011097984.1 | baseplate J/gp47 family protein | - |
| LZ753_RS06255 (LZ753_06255) | 1385210..1385506 | + | 297 | WP_004089252.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LZ753_RS06260 (LZ753_06260) | 1385510..1385815 | + | 306 | WP_004089254.1 | putative addiction module antidote protein | Antitoxin Detail |
| LZ753_RS06265 (LZ753_06265) | 1385826..1386179 | - | 354 | WP_234502177.1 | hypothetical protein | - |
| LZ753_RS06270 (LZ753_06270) | 1386176..1386817 | - | 642 | WP_012382583.1 | Gp138 family membrane-puncturing spike protein | - |
| LZ753_RS06275 (LZ753_06275) | 1386814..1387644 | - | 831 | WP_012382584.1 | hypothetical protein | - |
| LZ753_RS06280 (LZ753_06280) | 1387641..1387958 | - | 318 | WP_011097873.1 | hypothetical protein | - |
| LZ753_RS06285 (LZ753_06285) | 1387958..1388728 | - | 771 | WP_004090769.1 | hypothetical protein | - |
| LZ753_RS06290 (LZ753_06290) | 1388839..1389066 | + | 228 | WP_004091377.1 | DUF6290 family protein | Antitoxin Detail |
| LZ753_RS06295 (LZ753_06295) | 1389050..1389316 | + | 267 | WP_011097988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LZ753_RS06300 (LZ753_06300) | 1389327..1391120 | - | 1794 | WP_228446142.1 | phage tail tape measure protein | - |
| LZ753_RS06305 (LZ753_06305) | 1391173..1391337 | - | 165 | WP_014607750.1 | hypothetical protein | - |
| LZ753_RS06310 (LZ753_06310) | 1391364..1391786 | - | 423 | WP_004085005.1 | putative phage tail assembly chaperone | - |
| LZ753_RS06315 (LZ753_06315) | 1391783..1392220 | - | 438 | WP_011097990.1 | DUF3277 family protein | - |
| LZ753_RS06320 (LZ753_06320) | 1392230..1392463 | - | 234 | WP_011097991.1 | DUF3383 family protein | - |
| LZ753_RS06325 (LZ753_06325) | 1392480..1393358 | - | 879 | WP_012382645.1 | IS607 family transposase ISCARN56 | Transposase |
| LZ753_RS06330 (LZ753_06330) | 1393524..1393685 | - | 162 | WP_014607806.1 | IS607 family transposase ISCARN56 | Transposase |
| LZ753_RS06335 (LZ753_06335) | 1393679..1394284 | - | 606 | Protein_1237 | IS607 family transposase | - |
| LZ753_RS06340 (LZ753_06340) | 1394277..1394894 | + | 618 | WP_014607809.1 | truncated phage-related DNA polymerase | - |
| LZ753_RS06345 (LZ753_06345) | 1394891..1395169 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| LZ753_RS06350 (LZ753_06350) | 1395171..1395533 | - | 363 | WP_012382646.1 | hypothetical protein | - |
| LZ753_RS06355 (LZ753_06355) | 1395618..1397036 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| LZ753_RS06360 (LZ753_06360) | 1397033..1397197 | + | 165 | WP_012382647.1 | hypothetical protein | - |
| LZ753_RS06365 (LZ753_06365) | 1397190..1397447 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| LZ753_RS06370 (LZ753_06370) | 1397437..1398456 | + | 1020 | WP_011097994.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LZ753_RS06375 (LZ753_06375) | 1398523..1400460 | - | 1938 | WP_004088646.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| LZ753_RS06380 (LZ753_06380) | 1400622..1403003 | + | 2382 | WP_011097995.1 | TonB-dependent receptor | - |
| LZ753_RS06385 (LZ753_06385) | 1403093..1403761 | - | 669 | WP_004088644.1 | DsbA family oxidoreductase | - |
| LZ753_RS06390 (LZ753_06390) | 1404386..1406752 | + | 2367 | WP_011097996.1 | TonB-dependent receptor | - |
| LZ753_RS06395 (LZ753_06395) | 1407774..1409492 | + | 1719 | WP_011097997.1 | YbaL family putative K(+) efflux transporter | - |
| LZ753_RS06400 (LZ753_06400) | 1409867..1410961 | + | 1095 | WP_004086092.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| LZ753_RS06405 (LZ753_06405) | 1411073..1412047 | + | 975 | WP_004086093.1 | phosphate ABC transporter permease subunit PstC | - |
| LZ753_RS06410 (LZ753_06410) | 1412047..1412910 | + | 864 | WP_004086094.1 | phosphate ABC transporter permease PstA | - |
| LZ753_RS06415 (LZ753_06415) | 1412931..1413761 | + | 831 | WP_011097998.1 | Phosphate import ATP-binding protein PstB | VF |
| LZ753_RS06420 (LZ753_06420) | 1413779..1414501 | + | 723 | WP_004086097.1 | phosphate signaling complex protein PhoU | - |
| LZ753_RS06425 (LZ753_06425) | 1414723..1415355 | + | 633 | WP_004086100.1 | ribonuclease T | - |
| LZ753_RS06430 (LZ753_06430) | 1415837..1416634 | + | 798 | WP_011098000.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| LZ753_RS06435 (LZ753_06435) | 1416671..1417054 | + | 384 | WP_004086104.1 | Co2+/Mg2+ efflux protein ApaG | - |
| LZ753_RS06440 (LZ753_06440) | 1417069..1417956 | + | 888 | WP_011098001.1 | symmetrical bis(5'-nucleosyl)-tetraphosphatase | - |
| LZ753_RS06445 (LZ753_06445) | 1418500..1419774 | + | 1275 | WP_004088628.1 | lipase family protein | - |
| LZ753_RS06450 (LZ753_06450) | 1420004..1420753 | - | 750 | WP_004088627.1 | 3-deoxy-D-manno-octulosonic acid kinase | VF |
| LZ753_RS06455 (LZ753_06455) | 1420775..1421827 | + | 1053 | WP_004088625.1 | Lipopolysaccharide core heptosyltransferase RfaQ | VF |
| LZ753_RS06460 (LZ753_06460) | 1421845..1422252 | - | 408 | WP_011098003.1 | DUF6165 family protein | - |
| LZ753_RS06470 (LZ753_06470) | 1423137..1423829 | + | 693 | WP_011098004.1 | serine/threonine-protein phosphatase | - |
| LZ753_RS06475 (LZ753_06475) | 1423907..1424626 | - | 720 | WP_004088619.1 | DNA polymerase III subunit epsilon | - |
| LZ753_RS06480 (LZ753_06480) | 1424623..1425075 | - | 453 | WP_004088617.1 | ribonuclease HI | - |
| LZ753_RS06485 (LZ753_06485) | 1425089..1425739 | - | 651 | WP_004088616.1 | hypothetical protein | - |
| LZ753_RS06490 (LZ753_06490) | 1425751..1426527 | + | 777 | WP_011098005.1 | hydroxyacylglutathione hydrolase | - |
| LZ753_RS06495 (LZ753_06495) | 1426437..1426871 | - | 435 | WP_234502179.1 | hypothetical protein | - |
| LZ753_RS06500 (LZ753_06500) | 1426985..1427173 | + | 189 | WP_228762627.1 | EexN family lipoprotein | - |
| LZ753_RS06505 (LZ753_06505) | 1428019..1428246 | + | 228 | WP_004088610.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|