MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 26361 bp
Accession: NZ_CP090512 Location: 1..26361 Organism: Xylella fastidiosa subsp. multiplex strain Oak 35874 Replicon: plasmid pXF26-Oak35874
Accession: NZ_CP090512 Location: 1..26361 Organism: Xylella fastidiosa subsp. multiplex strain Oak 35874 Replicon: plasmid pXF26-Oak35874
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ754_RS12095 (LZ754_12095) | 130..1230 | + | 1101 | WP_128723750.1 | zeta toxin family protein | - |
| LZ754_RS12100 (LZ754_12100) | 1290..1553 | + | 264 | WP_038211571.1 | antitoxin | Antitoxin Detail |
| LZ754_RS12105 (LZ754_12105) | 1550..1876 | + | 327 | WP_038211573.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LZ754_RS12110 (LZ754_12110) | 1955..2917 | - | 963 | WP_234500013.1 | hypothetical protein | Relaxase |
| LZ754_RS12115 (LZ754_12115) | 3131..3418 | - | 288 | WP_020852266.1 | DUF4190 domain-containing protein | - |
| LZ754_RS12120 (LZ754_12120) | 3466..4572 | - | 1107 | WP_038211579.1 | hypothetical protein | - |
| LZ754_RS12125 (LZ754_12125) | 4585..6861 | - | 2277 | WP_020852264.1 | Protein VirD4 | VF |
| LZ754_RS12130 (LZ754_12130) | 6858..7901 | - | 1044 | WP_013087948.1 | Type IV secretion system protein VirB11 | VF |
| LZ754_RS12135 (LZ754_12135) | 7879..9198 | - | 1320 | WP_234500014.1 | Type IV secretion system protein virB10 | VF |
| LZ754_RS12140 (LZ754_12140) | 9201..9980 | - | 780 | WP_234500015.1 | Type IV secretion system protein virB9 | VF |
| LZ754_RS12145 (LZ754_12145) | 9977..10663 | - | 687 | WP_234500016.1 | Type IV secretion system protein PtlE | VF |
| LZ754_RS12150 (LZ754_12150) | 10691..11662 | - | 972 | WP_154415046.1 | type IV secretion system protein | - |
| LZ754_RS12155 (LZ754_12155) | 12026..12388 | - | 363 | WP_234500017.1 | hypothetical protein | - |
| LZ754_RS12160 (LZ754_12160) | 12658..13323 | - | 666 | WP_128723744.1 | Type IV secretion system protein virB5 | VF |
| LZ754_RS12165 (LZ754_12165) | 13398..15740 | - | 2343 | WP_234500010.1 | Type IV secretion system protein virB4 | VF |
| LZ754_RS12170 (LZ754_12170) | 15703..16086 | - | 384 | WP_234500011.1 | VirB3 family type IV secretion system protein | - |
| LZ754_RS12175 (LZ754_12175) | 16091..16411 | - | 321 | WP_014607308.1 | TrbC/VirB2 family protein | - |
| LZ754_RS12180 (LZ754_12180) | 16414..16893 | - | 480 | WP_080715118.1 | hypothetical protein | - |
| LZ754_RS12185 (LZ754_12185) | 16896..17075 | - | 180 | WP_014607310.1 | hypothetical protein | - |
| LZ754_RS12190 (LZ754_12190) | 17899..18258 | + | 360 | WP_038211603.1 | hypothetical protein | - |
| LZ754_RS12195 (LZ754_12195) | 18352..19023 | - | 672 | WP_013087963.1 | restriction endonuclease | - |
| LZ754_RS12200 (LZ754_12200) | 19048..19176 | + | 129 | WP_234056444.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LZ754_RS12205 (LZ754_12205) | 19228..19497 | - | 270 | WP_234500012.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LZ754_RS12210 (LZ754_12210) | 19481..19711 | - | 231 | WP_038211605.1 | DUF6290 family protein | Antitoxin Detail |
| LZ754_RS12215 (LZ754_12215) | 19888..20490 | + | 603 | WP_013087965.1 | Tn3 family transposase TnBth3 | Transposase |
| LZ754_RS12220 (LZ754_12220) | 20487..21353 | + | 867 | WP_128723949.1 | plasmid replication initiator TrfA | - |
| LZ754_RS12225 (LZ754_12225) | 21980..22723 | + | 744 | WP_014607315.1 | DNA-binding protein | - |
| LZ754_RS12230 (LZ754_12230) | 23076..23312 | + | 237 | WP_013087968.1 | antitoxin MazE family protein | - |
| LZ754_RS12235 (LZ754_12235) | 23309..23636 | + | 328 | Protein_29 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LZ754_RS12240 (LZ754_12240) | 23741..24184 | - | 444 | WP_014607318.1 | hypothetical protein | - |
| LZ754_RS12245 (LZ754_12245) | 24185..24937 | - | 753 | WP_013087971.1 | hypothetical protein | - |
| LZ754_RS12250 (LZ754_12250) | 24950..25210 | - | 261 | WP_199276035.1 | hypothetical protein | - |
| LZ754_RS12255 (LZ754_12255) | 25583..26212 | + | 630 | WP_230577574.1 | hypothetical protein | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|