MGE detailed information
MGE type: Prophage MGE length: 46688 bp
Accession: NZ_CP090407 Location: 389876..436563 Organism: Staphylococcus aureus strain GD4SA159-1 Replicon: chromosome
Accession: NZ_CP090407 Location: 389876..436563 Organism: Staphylococcus aureus strain GD4SA159-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ183_RS01730 (LZ183_01725) | 385320..385988 | + | 669 | WP_000936721.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| LZ183_RS01735 (LZ183_01730) | 386118..387431 | - | 1314 | WP_001077706.1 | YjiH family protein | - |
| LZ183_RS01740 (LZ183_01735) | 387848..389782 | + | 1935 | Protein_345 | YSIRK domain-containing triacylglycerol lipase Lip2/Geh | - |
| LZ183_RS01745 (LZ183_01740) | 389876..391081 | - | 1206 | WP_031912283.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LZ183_RS01750 (LZ183_01745) | 391207..391821 | + | 615 | WP_001568848.1 | phage protein | - |
| LZ183_RS01755 (LZ183_01750) | 391818..391964 | - | 147 | WP_001013104.1 | hypothetical protein | - |
| LZ183_RS01760 (LZ183_01755) | 392194..392778 | - | 585 | WP_000825948.1 | hypothetical protein | - |
| LZ183_RS01765 (LZ183_01760) | 392796..393257 | - | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| LZ183_RS01770 (LZ183_01765) | 393270..393584 | - | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| LZ183_RS01775 (LZ183_01770) | 393736..393972 | + | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| LZ183_RS01780 (LZ183_01775) | 393986..394762 | + | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| LZ183_RS01785 (LZ183_01780) | 394791..394934 | + | 144 | WP_000939498.1 | hypothetical protein | - |
| LZ183_RS01790 (LZ183_01785) | 394924..395133 | - | 210 | WP_000642492.1 | hypothetical protein | - |
| LZ183_RS01795 (LZ183_01790) | 395189..395338 | + | 150 | WP_000771849.1 | hypothetical protein | - |
| LZ183_RS01800 (LZ183_01795) | 395379..395591 | - | 213 | WP_000362644.1 | hypothetical protein | - |
| LZ183_RS01805 (LZ183_01800) | 395661..395858 | + | 198 | WP_001148860.1 | hypothetical protein | - |
| LZ183_RS01810 (LZ183_01805) | 395845..396225 | - | 381 | WP_000773059.1 | DUF2513 domain-containing protein | - |
| LZ183_RS01815 (LZ183_01810) | 396292..396537 | + | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| LZ183_RS01820 (LZ183_01815) | 396506..396871 | - | 366 | WP_001128432.1 | hypothetical protein | Antitoxin Detail |
| LZ183_RS01825 (LZ183_01820) | 396926..397141 | + | 216 | WP_001097552.1 | hypothetical protein | - |
| LZ183_RS01830 (LZ183_01825) | 397166..397429 | + | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| LZ183_RS01835 (LZ183_01830) | 397442..397603 | + | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| LZ183_RS01840 (LZ183_01835) | 397682..398005 | + | 324 | WP_000175000.1 | hypothetical protein | - |
| LZ183_RS01845 (LZ183_01840) | 398020..398382 | + | 363 | WP_000985986.1 | hypothetical protein | - |
| LZ183_RS01850 (LZ183_01845) | 398379..399545 | + | 1167 | WP_000762545.1 | DUF2800 domain-containing protein | - |
| LZ183_RS01855 (LZ183_01850) | 399571..400128 | + | 558 | WP_000645045.1 | DUF2815 family protein | - |
| LZ183_RS01860 (LZ183_01855) | 400196..402148 | + | 1953 | WP_113587704.1 | DNA polymerase | - |
| LZ183_RS01865 (LZ183_01860) | 402160..402315 | + | 156 | WP_000152769.1 | hypothetical protein | - |
| LZ183_RS01870 (LZ183_01865) | 402315..402500 | + | 186 | WP_001187263.1 | DUF3113 family protein | - |
| LZ183_RS01875 (LZ183_01870) | 402501..402860 | + | 360 | WP_000029380.1 | SA1788 family PVL leukocidin-associated protein | - |
| LZ183_RS01880 (LZ183_01875) | 402861..403109 | + | 249 | WP_001126836.1 | phi PVL orf 51-like protein | - |
| LZ183_RS01885 (LZ183_01880) | 403150..403332 | + | 183 | WP_001052894.1 | hypothetical protein | - |
| LZ183_RS01890 (LZ183_01885) | 403335..403736 | + | 402 | WP_000695760.1 | hypothetical protein | - |
| LZ183_RS01895 (LZ183_01890) | 403758..403892 | + | 135 | Protein_376 | dUTP pyrophosphatase | - |
| LZ183_RS01900 (LZ183_01895) | 403929..404123 | + | 195 | WP_000195798.1 | DUF1381 domain-containing protein | - |
| LZ183_RS01905 (LZ183_01900) | 404120..404323 | + | 204 | WP_031911912.1 | hypothetical protein | - |
| LZ183_RS01910 (LZ183_01905) | 404316..404552 | + | 237 | WP_000608281.1 | hypothetical protein | - |
| LZ183_RS01915 (LZ183_01910) | 404542..404931 | + | 390 | WP_001596346.1 | hypothetical protein | - |
| LZ183_RS01920 (LZ183_01915) | 404928..405080 | + | 153 | WP_000595269.1 | transcriptional activator RinB | - |
| LZ183_RS01925 (LZ183_01920) | 405148..405348 | + | 201 | WP_000265258.1 | DUF1514 family protein | - |
| LZ183_RS01930 (LZ183_01925) | 405400..407847 | + | 2448 | WP_000884847.1 | virulence-associated E family protein | - |
| LZ183_RS01935 (LZ183_01930) | 407956..408054 | - | 99 | WP_001801650.1 | hypothetical protein | - |
| LZ183_RS01940 (LZ183_01935) | 408188..408478 | + | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| LZ183_RS01945 (LZ183_01940) | 408459..409826 | + | 1368 | WP_113587693.1 | DEAD/DEAH box helicase | - |
| LZ183_RS01950 (LZ183_01945) | 409839..410276 | + | 438 | WP_113587695.1 | transcriptional regulator | - |
| LZ183_RS01955 (LZ183_01950) | 410433..410747 | + | 315 | WP_113587697.1 | HNH endonuclease | - |
| LZ183_RS01960 (LZ183_01955) | 410876..411181 | + | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| LZ183_RS01965 (LZ183_01960) | 411171..412862 | + | 1692 | WP_000153556.1 | terminase large subunit | - |
| LZ183_RS01970 (LZ183_01965) | 412867..414105 | + | 1239 | WP_031911915.1 | phage portal protein | - |
| LZ183_RS01975 (LZ183_01970) | 414089..414862 | + | 774 | WP_113587699.1 | Clp protease ClpP | - |
| LZ183_RS01980 (LZ183_01975) | 414874..416037 | + | 1164 | WP_031883907.1 | phage major capsid protein | - |
| LZ183_RS01985 (LZ183_01980) | 416106..416384 | + | 279 | WP_000050973.1 | head-tail connector protein | - |
| LZ183_RS01990 (LZ183_01985) | 416396..416728 | + | 333 | WP_000395498.1 | hypothetical protein | - |
| LZ183_RS01995 (LZ183_01990) | 416725..417126 | + | 402 | WP_000110017.1 | hypothetical protein | - |
| LZ183_RS02000 (LZ183_01995) | 417127..417522 | + | 396 | WP_031838002.1 | DUF3168 domain-containing protein | - |
| LZ183_RS02005 (LZ183_02000) | 417558..418199 | + | 642 | WP_000807536.1 | phage tail protein | - |
| LZ183_RS02010 (LZ183_02005) | 418291..418746 | + | 456 | WP_000169127.1 | Ig-like domain-containing protein | - |
| LZ183_RS02015 (LZ183_02010) | 418804..419154 | + | 351 | WP_000589167.1 | hypothetical protein | - |
| LZ183_RS02020 (LZ183_02015) | 419196..419354 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| LZ183_RS02025 (LZ183_02020) | 419368..425568 | + | 6201 | WP_113587701.1 | phage tail tape measure protein | - |
| LZ183_RS02030 (LZ183_02025) | 425568..426392 | + | 825 | WP_001190533.1 | phage tail family protein | - |
| LZ183_RS02035 (LZ183_02030) | 426401..427984 | + | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| LZ183_RS02040 (LZ183_02035) | 427984..428274 | + | 291 | WP_000179861.1 | hypothetical protein | - |
| LZ183_RS02045 (LZ183_02040) | 428290..430200 | + | 1911 | WP_000429552.1 | hypothetical protein | - |
| LZ183_RS02050 (LZ183_02045) | 430200..431666 | + | 1467 | WP_000067131.1 | BppU family phage baseplate upper protein | - |
| LZ183_RS02055 (LZ183_02050) | 431666..432055 | + | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| LZ183_RS02060 (LZ183_02055) | 432048..432212 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| LZ183_RS02065 (LZ183_02060) | 432459..432695 | + | 237 | WP_001159903.1 | hypothetical protein | - |
| LZ183_RS02070 (LZ183_02065) | 432702..434654 | + | 1953 | WP_000163792.1 | hypothetical protein | - |
| LZ183_RS02075 (LZ183_02070) | 434726..435223 | - | 498 | WP_000868795.1 | Dihydrofolate reductase | ARG |
| LZ183_RS02080 (LZ183_02075) | 435621..436247 | + | 627 | WP_058142421.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| LZ183_RS02085 (LZ183_02080) | 436315..436563 | + | 249 | WP_058142422.1 | N-acetyltransferase | - |
| LZ183_RS02090 (LZ183_02085) | 436577..437371 | + | 795 | WP_058142423.1 | hypothetical protein | - |
| LZ183_RS02095 (LZ183_02090) | 437449..438622 | + | 1174 | Protein_416 | IS256-like element IS256 family transposase | - |
| LZ183_RS02100 (LZ183_02095) | 438741..440180 | - | 1440 | WP_001028144.1 | aminoglycoside O-phosphotransferase APH(2'')-Ia | - |
| LZ183_RS02105 (LZ183_02100) | 440181..440573 | - | 393 | WP_000393259.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|