MGE detailed information
MGE type: Prophage MGE length: 18746 bp
Accession: NZ_CP090386 Location: 982167..1000912 Organism: Vibrio cholerae strain GXFL1-4 Replicon: chromosome
Accession: NZ_CP090386 Location: 982167..1000912 Organism: Vibrio cholerae strain GXFL1-4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LY388_RS04345 (LY388_04345) | 977542..977937 | - | 396 | WP_000870868.1 | DUF3465 domain-containing protein | - |
| LY388_RS04350 (LY388_04350) | 978108..978422 | - | 315 | WP_000248689.1 | DUF4144 domain-containing protein | - |
| LY388_RS04355 (LY388_04355) | 978570..979373 | - | 804 | WP_187387433.1 | class I SAM-dependent methyltransferase | - |
| LY388_RS04360 (LY388_04360) | 979523..980311 | - | 789 | WP_114736530.1 | DUF2971 domain-containing protein | - |
| LY388_RS04365 (LY388_04365) | 980452..980988 | - | 537 | WP_234115899.1 | nucleotidyltransferase family protein | - |
| LY388_RS04370 (LY388_04370) | 981123..981620 | - | 498 | WP_033933253.1 | GNAT family N-acetyltransferase | - |
| LY388_RS04375 (LY388_04375) | 981764..981955 | - | 192 | Protein_871 | hypothetical protein | - |
| LY388_RS04380 (LY388_04380) | 982167..982838 | - | 672 | WP_113599381.1 | helix-turn-helix transcriptional regulator | - |
| LY388_RS04385 (LY388_04385) | 982910..983128 | + | 219 | WP_000758146.1 | hypothetical protein | - |
| LY388_RS04390 (LY388_04390) | 983145..983480 | + | 336 | WP_148525332.1 | primosomal protein | - |
| LY388_RS04395 (LY388_04395) | 983477..983611 | + | 135 | Protein_875 | IclR family transcriptional regulator | - |
| LY388_RS04400 (LY388_04400) | 983811..984782 | + | 972 | WP_148525335.1 | MarR family transcriptional regulator | - |
| LY388_RS04405 (LY388_04405) | 984789..986546 | + | 1758 | WP_000992438.1 | hypothetical protein ; Integrase | Integrase |
| LY388_RS04410 (LY388_04410) | 986518..987627 | + | 1110 | WP_001094671.1 | ExeA family protein | - |
| LY388_RS04415 (LY388_04415) | 987630..988091 | + | 462 | WP_001064710.1 | hypothetical protein | - |
| LY388_RS04420 (LY388_04420) | 988088..988321 | + | 234 | WP_148525337.1 | hypothetical protein | - |
| LY388_RS04425 (LY388_04425) | 988905..989273 | + | 369 | WP_000881594.1 | Mor transcription activator family protein | - |
| LY388_RS04430 (LY388_04430) | 989260..989580 | + | 321 | WP_000189109.1 | Mor transcription activator family protein | - |
| LY388_RS04435 (LY388_04435) | 989599..990177 | + | 579 | WP_148525340.1 | glyoxalase | - |
| LY388_RS04440 (LY388_04440) | 990238..990609 | + | 372 | WP_000401420.1 | hypothetical protein | - |
| LY388_RS04445 (LY388_04445) | 990659..991018 | + | 360 | WP_000290080.1 | phage tail assembly protein | - |
| LY388_RS04450 (LY388_04450) | 991234..992163 | + | 930 | Protein_886 | tape measure protein | - |
| LY388_RS04455 (LY388_04455) | 992149..992844 | + | 696 | WP_032472361.1 | hypothetical protein | - |
| LY388_RS04460 (LY388_04460) | 992947..993141 | - | 195 | Protein_888 | hypothetical protein | - |
| LY388_RS04465 (LY388_04465) | 993292..993756 | - | 465 | WP_057563742.1 | GNAT family N-acetyltransferase | - |
| LY388_RS04470 (LY388_04470) | 993915..994454 | - | 540 | WP_057563841.1 | hydrolase | - |
| LY388_RS04475 (LY388_04475) | 994659..994805 | - | 147 | WP_234115992.1 | DUF645 family protein | - |
| LY388_RS04480 (LY388_04480) | 995154..995456 | - | 303 | WP_000229322.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LY388_RS04485 (LY388_04485) | 995444..995701 | - | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LY388_RS04490 (LY388_04490) | 996404..996586 | - | 183 | WP_148504768.1 | DUF645 family protein | - |
| LY388_RS04495 (LY388_04495) | 996940..997112 | - | 173 | Protein_895 | DUF645 family protein | - |
| LY388_RS04500 (LY388_04500) | 997173..997313 | - | 141 | Protein_896 | acetyltransferase | - |
| LY388_RS04505 (LY388_04505) | 997893..998492 | - | 600 | WP_057563830.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LY388_RS04510 (LY388_04510) | 998732..998878 | - | 147 | Protein_898 | DUF645 family protein | - |
| LY388_RS04515 (LY388_04515) | 998939..999074 | - | 136 | Protein_899 | acetyltransferase | - |
| LY388_RS04520 (LY388_04520) | 999055..999174 | - | 120 | WP_080004135.1 | DUF3265 domain-containing protein | - |
| LY388_RS04525 (LY388_04525) | 999167..999868 | - | 702 | WP_001162671.1 | HNH endonuclease | - |
| LY388_RS04530 (LY388_04530) | 999898..1000008 | - | 111 | WP_196389672.1 | DUF3265 domain-containing protein | - |
| LY388_RS04535 (LY388_04535) | 1000493..1000912 | - | 420 | WP_114808795.1 | hypothetical protein | - |
| LY388_RS04540 (LY388_04540) | 1001111..1001215 | - | 105 | WP_199358725.1 | DUF645 family protein | - |
| LY388_RS04545 (LY388_04545) | 1001185..1001286 | - | 102 | Protein_905 | DUF645 family protein | - |
| LY388_RS04550 (LY388_04550) | 1001584..1002354 | - | 771 | WP_000797384.1 | alpha/beta hydrolase | - |
| LY388_RS04555 (LY388_04555) | 1002518..1002895 | - | 378 | WP_057552762.1 | hypothetical protein | - |
| LY388_RS04560 (LY388_04560) | 1003053..1003583 | - | 531 | WP_095467805.1 | hypothetical protein | - |
| LY388_RS04565 (LY388_04565) | 1003732..1004046 | - | 315 | WP_000071010.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| LY388_RS04570 (LY388_04570) | 1004033..1004365 | - | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LY388_RS04575 (LY388_04575) | 1004555..1004692 | - | 138 | Protein_911 | cell shape-determining protein MreC | - |
| LY388_RS04580 (LY388_04580) | 1004667..1004720 | - | 54 | Protein_912 | DUF645 family protein | - |
| LY388_RS04585 (LY388_04585) | 1005076..1005585 | - | 510 | WP_142626918.1 | GNAT family N-acetyltransferase | - |
| LY388_RS04590 (LY388_04590) | 1005612..1005674 | - | 63 | Protein_914 | acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|