MGE detailed information
MGE type: Prophage MGE length: 22198 bp
Accession: NZ_CP090316 Location: 2211955..2234152 Organism: Xylella fastidiosa subsp. morus strain Riv16 Replicon: chromosome
Accession: NZ_CP090316 Location: 2211955..2234152 Organism: Xylella fastidiosa subsp. morus strain Riv16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD23_RS10000 (IUD23_10000) | 2208984..2209751 | + | 768 | WP_011097790.1 | NAD kinase | - |
| IUD23_RS10005 (IUD23_10005) | 2209837..2210796 | + | 960 | WP_038229198.1 | 5'-nucleotidase | - |
| IUD23_RS10010 (IUD23_10010) | 2210984..2211535 | + | 552 | WP_234056323.1 | cupin domain-containing protein | - |
| IUD23_RS12265 | 2211942..2212073 | + | 132 | WP_256626255.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| IUD23_RS10015 (IUD23_10015) | 2212027..2212581 | + | 555 | WP_267959504.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| IUD23_RS10020 (IUD23_10020) | 2212487..2214353 | - | 1867 | Protein_1963 | DUF5710 domain-containing protein | - |
| IUD23_RS10025 (IUD23_10025) | 2215000..2215371 | - | 372 | Protein_1964 | zincin-like metallopeptidase domain-containing protein | - |
| IUD23_RS10030 (IUD23_10030) | 2215387..2216269 | + | 883 | Protein_1965 | hypothetical protein | VF |
| IUD23_RS10035 (IUD23_10035) | 2216355..2216645 | + | 291 | WP_230577681.1 | TrbC/VirB2 family protein | - |
| IUD23_RS10040 (IUD23_10040) | 2216677..2216997 | + | 321 | WP_038229213.1 | conjugal transfer protein TrbD | - |
| IUD23_RS12270 | 2216985..2217155 | + | 171 | WP_155266591.1 | hypothetical protein | - |
| IUD23_RS10045 (IUD23_10045) | 2217214..2219472 | + | 2259 | WP_267959505.1 | conjugal transfer protein TrbE | - |
| IUD23_RS10050 (IUD23_10050) | 2219469..2220185 | + | 717 | WP_040123137.1 | conjugal transfer protein TrbF | - |
| IUD23_RS10055 (IUD23_10055) | 2220202..2221092 | + | 891 | WP_038229217.1 | P-type conjugative transfer protein TrbG | - |
| IUD23_RS10060 (IUD23_10060) | 2221095..2221571 | + | 477 | WP_050812601.1 | conjugal transfer protein TrbH | - |
| IUD23_RS10065 (IUD23_10065) | 2221577..2222977 | + | 1401 | WP_004091515.1 | TrbI/VirB10 family protein | - |
| IUD23_RS10070 (IUD23_10070) | 2222996..2223781 | + | 786 | WP_004091516.1 | P-type conjugative transfer protein TrbJ | - |
| IUD23_RS10075 (IUD23_10075) | 2223821..2224108 | + | 288 | WP_004091517.1 | EexN family lipoprotein | - |
| IUD23_RS10080 (IUD23_10080) | 2224114..2225511 | + | 1398 | WP_051606203.1 | P-type conjugative transfer protein TrbL | - |
| IUD23_RS10085 (IUD23_10085) | 2225517..2226122 | + | 606 | WP_038229220.1 | hypothetical protein | VF |
| IUD23_RS10090 (IUD23_10090) | 2226218..2227375 | - | 1158 | WP_038229247.1 | IS200-IS605 family transposase IS609 | Transposase |
| IUD23_RS10095 (IUD23_10095) | 2227398..2227814 | + | 417 | WP_038229223.1 | IS200-IS605 family transposase IS609 | Transposase |
| IUD23_RS10100 (IUD23_10100) | 2228220..2229146 | + | 927 | WP_051606204.1 | hypothetical protein | - |
| IUD23_RS10105 (IUD23_10105) | 2229288..2229614 | - | 327 | WP_004091396.1 | DNA-binding protein | - |
| IUD23_RS10110 (IUD23_10110) | 2229744..2230064 | - | 321 | WP_004091397.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IUD23_RS10115 (IUD23_10115) | 2230525..2230815 | + | 291 | WP_038229226.1 | BrnT family toxin | Toxin Detail |
| IUD23_RS10120 (IUD23_10120) | 2230802..2231107 | + | 306 | WP_004091409.1 | BrnA antitoxin family protein | Antitoxin Detail |
| IUD23_RS10125 (IUD23_10125) | 2231359..2231601 | + | 243 | WP_004085758.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| IUD23_RS10130 (IUD23_10130) | 2231594..2231881 | + | 288 | WP_038229230.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUD23_RS10135 (IUD23_10135) | 2231969..2232535 | + | 567 | WP_038229232.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| IUD23_RS10140 (IUD23_10140) | 2232620..2232877 | - | 258 | WP_038229233.1 | hypothetical protein | - |
| IUD23_RS10145 (IUD23_10145) | 2233145..2233570 | - | 426 | WP_038229235.1 | antirestriction protein | - |
| IUD23_RS10150 (IUD23_10150) | 2233694..2234888 | - | 1195 | Protein_1990 | DUF5710 domain-containing protein | - |
| IUD23_RS10155 (IUD23_10155) | 2234854..2235852 | - | 999 | WP_004085391.1 | MBL fold metallo-hydrolase | - |
| IUD23_RS10160 (IUD23_10160) | 2235984..2236670 | - | 687 | WP_038229254.1 | TIGR02453 family protein | - |
| IUD23_RS10165 (IUD23_10165) | 2236667..2238103 | - | 1437 | WP_038229256.1 | exodeoxyribonuclease I | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|