MGE detailed information
MGE type: Prophage MGE length: 46360 bp
Accession: NZ_CP090316 Location: 1921681..1968040 Organism: Xylella fastidiosa subsp. morus strain Riv16 Replicon: chromosome
Accession: NZ_CP090316 Location: 1921681..1968040 Organism: Xylella fastidiosa subsp. morus strain Riv16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD23_RS08570 (IUD23_08570) | 1918175..1921117 | + | 2943 | WP_038229064.1 | aminomethyl-transferring glycine dehydrogenase | - |
| IUD23_RS08575 (IUD23_08575) | 1921681..1922742 | - | 1062 | WP_004090681.1 | hypothetical protein ; Integrase | Integrase |
| IUD23_RS08580 (IUD23_08580) | 1922754..1922990 | - | 237 | WP_004090683.1 | DUF4224 domain-containing protein | - |
| IUD23_RS08585 (IUD23_08585) | 1922987..1924381 | - | 1395 | WP_234056284.1 | DEAD/DEAH box helicase | - |
| IUD23_RS08590 (IUD23_08590) | 1924466..1924828 | + | 363 | WP_234056272.1 | DUF1640 domain-containing protein | - |
| IUD23_RS08595 (IUD23_08595) | 1924830..1925108 | - | 279 | WP_234056263.1 | VRR-NUC domain-containing protein | - |
| IUD23_RS08600 (IUD23_08600) | 1925105..1927252 | - | 2148 | WP_234056285.1 | DNA polymerase | - |
| IUD23_RS08605 (IUD23_08605) | 1927286..1928443 | - | 1158 | WP_234056261.1 | BRO family protein | - |
| IUD23_RS08610 (IUD23_08610) | 1928568..1929134 | - | 567 | WP_234056260.1 | DUF2815 family protein | - |
| IUD23_RS08615 (IUD23_08615) | 1929131..1930411 | - | 1281 | WP_234056286.1 | DUF2800 domain-containing protein | - |
| IUD23_RS08620 (IUD23_08620) | 1930408..1930839 | - | 432 | WP_234056258.1 | hypothetical protein | - |
| IUD23_RS08625 (IUD23_08625) | 1930896..1931090 | - | 195 | WP_016024078.1 | hypothetical protein | - |
| IUD23_RS08630 (IUD23_08630) | 1931122..1931316 | - | 195 | WP_020852641.1 | hypothetical protein | - |
| IUD23_RS08635 (IUD23_08635) | 1931313..1931714 | - | 402 | WP_004088547.1 | hypothetical protein | - |
| IUD23_RS08640 (IUD23_08640) | 1931714..1932175 | - | 462 | WP_004088545.1 | DUF1566 domain-containing protein | - |
| IUD23_RS08645 (IUD23_08645) | 1932172..1932960 | - | 789 | WP_234056287.1 | hypothetical protein | - |
| IUD23_RS08650 (IUD23_08650) | 1933194..1933952 | - | 759 | WP_038230430.1 | helix-turn-helix transcriptional regulator | - |
| IUD23_RS08655 (IUD23_08655) | 1934038..1934298 | + | 261 | WP_012382631.1 | YdaS family helix-turn-helix protein | - |
| IUD23_RS08660 (IUD23_08660) | 1934295..1934600 | - | 306 | WP_038230427.1 | hypothetical protein | - |
| IUD23_RS08665 (IUD23_08665) | 1934728..1934916 | + | 189 | WP_004085135.1 | hypothetical protein | - |
| IUD23_RS08670 (IUD23_08670) | 1934946..1935161 | + | 216 | WP_234056288.1 | hypothetical protein | - |
| IUD23_RS08675 (IUD23_08675) | 1935179..1935412 | + | 234 | WP_234056289.1 | hypothetical protein | - |
| IUD23_RS08680 (IUD23_08680) | 1935440..1936006 | + | 567 | WP_234056290.1 | Bro-N domain-containing protein | - |
| IUD23_RS08685 (IUD23_08685) | 1936142..1938688 | + | 2547 | WP_234056291.1 | phage/plasmid primase, P4 family | - |
| IUD23_RS08690 (IUD23_08690) | 1939496..1940113 | + | 618 | WP_038230188.1 | hypothetical protein | - |
| IUD23_RS08695 (IUD23_08695) | 1940080..1940580 | + | 501 | WP_234056292.1 | lysozyme | - |
| IUD23_RS08700 (IUD23_08700) | 1940573..1940896 | + | 324 | WP_234056293.1 | phage holin family protein | - |
| IUD23_RS08705 (IUD23_08705) | 1940893..1941354 | + | 462 | WP_020852852.1 | hypothetical protein | - |
| IUD23_RS08710 (IUD23_08710) | 1941356..1941580 | + | 225 | WP_234056294.1 | hypothetical protein | - |
| IUD23_RS08715 (IUD23_08715) | 1941753..1942286 | + | 534 | WP_050765486.1 | terminase small subunit | - |
| IUD23_RS08720 (IUD23_08720) | 1942279..1944231 | + | 1953 | WP_038230181.1 | phage terminase large subunit family protein | - |
| IUD23_RS08725 (IUD23_08725) | 1944235..1944786 | + | 552 | WP_038230179.1 | hypothetical protein | - |
| IUD23_RS08730 (IUD23_08730) | 1944783..1946369 | + | 1587 | WP_040123115.1 | phage portal protein | - |
| IUD23_RS08735 (IUD23_08735) | 1946366..1948240 | + | 1875 | WP_038230171.1 | phage major capsid protein | - |
| IUD23_RS08740 (IUD23_08740) | 1948258..1948566 | + | 309 | WP_234056295.1 | hypothetical protein | - |
| IUD23_RS08745 (IUD23_08745) | 1948517..1948840 | + | 324 | WP_027700441.1 | hypothetical protein | - |
| IUD23_RS08750 (IUD23_08750) | 1948837..1949358 | + | 522 | WP_038230165.1 | hypothetical protein | - |
| IUD23_RS08755 (IUD23_08755) | 1949334..1949876 | + | 543 | WP_038230164.1 | hypothetical protein | - |
| IUD23_RS08760 (IUD23_08760) | 1949873..1950460 | + | 588 | WP_040123117.1 | phage baseplate assembly protein V | - |
| IUD23_RS08765 (IUD23_08765) | 1950529..1950930 | - | 402 | WP_004090697.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| IUD23_RS08770 (IUD23_08770) | 1950933..1951235 | - | 303 | WP_038230541.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| IUD23_RS08775 (IUD23_08775) | 1951323..1951598 | - | 276 | WP_004085172.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| IUD23_RS08780 (IUD23_08780) | 1951609..1951890 | - | 282 | WP_004085174.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUD23_RS08785 (IUD23_08785) | 1952103..1952426 | + | 324 | WP_228304176.1 | GPW/gp25 family protein | - |
| IUD23_RS08790 (IUD23_08790) | 1952426..1953319 | + | 894 | WP_234056296.1 | baseplate J/gp47 family protein | - |
| IUD23_RS08795 (IUD23_08795) | 1953312..1953869 | + | 558 | WP_027700436.1 | phage tail protein I | - |
| IUD23_RS08800 (IUD23_08800) | 1953877..1955469 | + | 1593 | WP_040123119.1 | tail fiber domain-containing protein | - |
| IUD23_RS08805 (IUD23_08805) | 1955534..1956712 | + | 1179 | WP_027700434.1 | phage tail sheath family protein | - |
| IUD23_RS08810 (IUD23_08810) | 1956712..1957221 | + | 510 | WP_012337639.1 | phage major tail tube protein | - |
| IUD23_RS08815 (IUD23_08815) | 1957224..1957511 | + | 288 | WP_012337638.1 | phage tail assembly protein | - |
| IUD23_RS08820 (IUD23_08820) | 1957602..1959857 | + | 2256 | WP_234056297.1 | phage tail tape measure protein | - |
| IUD23_RS08825 (IUD23_08825) | 1959854..1960336 | + | 483 | WP_071869466.1 | phage tail protein | - |
| IUD23_RS08830 (IUD23_08830) | 1960333..1960551 | + | 219 | WP_038230466.1 | tail protein X | - |
| IUD23_RS08835 (IUD23_08835) | 1960542..1961624 | + | 1083 | WP_234056298.1 | phage late control D family protein | - |
| IUD23_RS08840 (IUD23_08840) | 1961920..1962261 | - | 342 | WP_004089237.1 | cytochrome o ubiquinol oxidase subunit IV | - |
| IUD23_RS08845 (IUD23_08845) | 1962261..1962869 | - | 609 | WP_004089235.1 | cytochrome o ubiquinol oxidase subunit III | - |
| IUD23_RS08850 (IUD23_08850) | 1962875..1964872 | - | 1998 | WP_027700013.1 | cytochrome o ubiquinol oxidase subunit I | - |
| IUD23_RS08855 (IUD23_08855) | 1964866..1965825 | - | 960 | WP_027700012.1 | ubiquinol oxidase subunit II | - |
| IUD23_RS08860 (IUD23_08860) | 1966294..1967295 | - | 1002 | WP_038229804.1 | polyprenyl synthetase family protein | - |
| IUD23_RS08865 (IUD23_08865) | 1967546..1968040 | + | 495 | WP_004089231.1 | single-stranded DNA-binding protein | - |
| IUD23_RS08870 (IUD23_08870) | 1968315..1968479 | + | 165 | WP_162832860.1 | hypothetical protein | - |
| IUD23_RS08875 (IUD23_08875) | 1969688..1970518 | + | 831 | WP_080679699.1 | methyltransferase domain-containing protein | - |
| IUD23_RS08880 (IUD23_08880) | 1970831..1972027 | + | 1197 | WP_038229878.1 | cation:proton antiporter | - |
| IUD23_RS08885 (IUD23_08885) | 1972188..1972715 | - | 528 | WP_052151239.1 | lactoylglutathione lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|