MGE detailed information
MGE type: IS/Tn MGE length: 459 bp
Accession: NZ_CP090304 Location: 4559432..4559890 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ZJUJY Replicon: chromosome
Accession: NZ_CP090304 Location: 4559432..4559890 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ZJUJY Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPC12_RS22060 (4554958) | 4554958..4555731 | + | 774 | WP_000544929.1 | dimethyl sulfoxide reductase anchor subunit | - |
| LPC12_RS22065 (4555747) | 4555747..4556400 | + | 654 | WP_001112218.1 | molecular chaperone | - |
| LPC12_RS22070 (4556484) | 4556484..4557884 | - | 1401 | WP_000773784.1 | DUF1996 domain-containing protein | - |
| LPC12_RS22075 (4558188) | 4558188..4559093 | + | 906 | WP_001268200.1 | YjiK family protein | - |
| LPC12_RS22080 (4559432) | 4559432..4559890 | + | 459 | WP_000502119.1 | IS200-IS605 family transposase IS200F | Transposase |
| LPC12_RS22085 (4560099) | 4560099..4560368 | - | 270 | WP_010989096.1 | hypothetical protein | - |
| LPC12_RS22090 (4560376) | 4560376..4560591 | - | 216 | WP_001595136.1 | hypothetical protein | - |
| LPC12_RS22095 (4560614) | 4560614..4560901 | - | 288 | WP_001269916.1 | transcriptional regulator RtsB | - |
| LPC12_RS22100 (4560898) | 4560898..4561773 | - | 876 | WP_000921675.1 | AraC family transcriptional regulator | - |
| LPC12_RS22105 (4562038) | 4562038..4562259 | - | 222 | WP_001576552.1 | hypothetical protein | - |
| LPC12_RS22110 (4562576) | 4562576..4562869 | + | 294 | WP_001110452.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LPC12_RS22115 (4562866) | 4562866..4563357 | + | 492 | WP_000626099.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LPC12_RS22120 (4563605) | 4563605..4564357 | - | 753 | WP_000842434.1 | non-specific acid phosphatase | - |
| LPC12_RS22125 (4564460) | 4564460..4564534 | - | 75 | Protein_4315 | porin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | IS/Tn | TA439 | NC_003197 | 3194324..3194782 | 0 |