MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 43861 bp
Accession: NZ_CP090026 Location: 1..43861 Organism: Cereibacter azotoformans strain SY5 Replicon: plasmid p4
Accession: NZ_CP090026 Location: 1..43861 Organism: Cereibacter azotoformans strain SY5 Replicon: plasmid p4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LV780_RS21715 (LV780_21715) | 1506..1748 | + | 243 | WP_108222755.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LV780_RS21720 (LV780_21720) | 1748..2149 | + | 402 | WP_117345303.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LV780_RS21725 (LV780_21725) | 2287..2982 | + | 696 | WP_108222601.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| LV780_RS21730 (LV780_21730) | 3109..3489 | + | 381 | WP_108222600.1 | XRE family transcriptional regulator | - |
| LV780_RS21735 (LV780_21735) | 3449..4225 | + | 777 | WP_108222599.1 | RES family NAD+ phosphorylase | - |
| LV780_RS21740 (LV780_21740) | 6611..6904 | - | 294 | WP_108222598.1 | CRISPR-associated endonuclease Cas2 | - |
| LV780_RS21745 (LV780_21745) | 6908..8629 | - | 1722 | WP_108222597.1 | CRISPR-associated endonuclease Cas4/Cas1 | - |
| LV780_RS21750 (LV780_21750) | 8636..10723 | - | 2088 | WP_181318582.1 | type I-U CRISPR-associated protein Csb2 | - |
| LV780_RS21755 (LV780_21755) | 10728..11762 | - | 1035 | WP_108222595.1 | type I-U CRISPR-associated RAMP protein Csb1/Cas7u | - |
| LV780_RS21760 (LV780_21760) | 11759..12625 | - | 867 | WP_108222594.1 | type I-U CRISPR-associated protein Cas8c | - |
| LV780_RS21765 (LV780_21765) | 12618..15188 | - | 2571 | WP_233864439.1 | type I-U CRISPR-associated helicase/endonuclease Cas3 | - |
| LV780_RS21770 (LV780_21770) | 15312..16199 | + | 888 | WP_108222603.1 | WYL domain-containing protein | - |
| LV780_RS21775 (LV780_21775) | 16327..16725 | + | 399 | WP_108222592.1 | helix-turn-helix transcriptional regulator | - |
| LV780_RS21780 (LV780_21780) | 16932..19817 | - | 2886 | WP_117345320.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LV780_RS21785 (LV780_21785) | 19903..20337 | - | 435 | WP_117345321.1 | MarR family transcriptional regulator | - |
| LV780_RS21790 (LV780_21790) | 20405..20851 | + | 447 | WP_117345322.1 | hypothetical protein | - |
| LV780_RS21795 (LV780_21795) | 21014..21601 | + | 588 | WP_117345301.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LV780_RS21800 (LV780_21800) | 22304..23098 | + | 795 | WP_108222591.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| LV780_RS21805 (LV780_21805) | 23148..24506 | - | 1359 | WP_181318580.1 | GIY-YIG nuclease family protein | - |
| LV780_RS21810 (LV780_21810) | 25289..26068 | + | 780 | WP_108222589.1 | IS607 family transposase ISCARN1 | Transposase |
| LV780_RS21815 (LV780_21815) | 26369..26770 | - | 402 | WP_108222588.1 | hypothetical protein | - |
| LV780_RS21820 (LV780_21820) | 26789..27052 | - | 264 | WP_108222587.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| LV780_RS21825 (LV780_21825) | 27133..27297 | - | 165 | WP_181318579.1 | hypothetical protein | - |
| LV780_RS21830 (LV780_21830) | 27480..27788 | + | 309 | WP_108222586.1 | hypothetical protein | - |
| LV780_RS21835 (LV780_21835) | 28306..29469 | - | 1164 | WP_108222585.1 | DUF4268 domain-containing protein | - |
| LV780_RS21840 (LV780_21840) | 29756..30163 | - | 408 | WP_108222584.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LV780_RS21845 (LV780_21845) | 30163..30372 | - | 210 | WP_181318578.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LV780_RS21850 (LV780_21850) | 30564..31091 | + | 528 | WP_108222583.1 | hypothetical protein | - |
| LV780_RS21855 (LV780_21855) | 31255..33036 | + | 1782 | WP_108222582.1 | DUF927 domain-containing protein | - |
| LV780_RS21860 (LV780_21860) | 33358..33522 | + | 165 | Protein_30 | IS5/IS1182 family transposase | - |
| LV780_RS21865 (LV780_21865) | 33930..35069 | + | 1140 | WP_205025762.1 | hypothetical protein | - |
| LV780_RS21870 (LV780_21870) | 35315..36655 | + | 1341 | Protein_32 | IS1634 family transposase ISPfe2 | Transposase |
| LV780_RS21875 (LV780_21875) | 36736..38382 | - | 1647 | WP_117344998.1 | IS1634 family transposase ISPfe2 | Transposase |
| LV780_RS21880 (LV780_21880) | 38559..41687 | - | 3129 | WP_108222751.1 | hypothetical protein | VF |
| LV780_RS21885 (LV780_21885) | 41982..42263 | + | 282 | Protein_35 | IS256 family transposase ISPaes3 | Transposase |
| LV780_RS21890 (LV780_21890) | 42351..42683 | - | 333 | WP_108222752.1 | stability/partitioning determinant | - |
| LV780_RS21895 (LV780_21895) | 42680..43357 | - | 678 | WP_108222753.1 | ParA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|