MGE detailed information
MGE type: Prophage MGE length: 51941 bp
Accession: NZ_CP089942 Location: 301714..353654 Organism: Erwinia tracheiphila strain MDCuke Replicon: chromosome
Accession: NZ_CP089942 Location: 301714..353654 Organism: Erwinia tracheiphila strain MDCuke Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LU604_RS01465 (LU604_01465) | 297543..298080 | + | 538 | Protein_283 | ATP-binding protein | - |
| LU604_RS01470 (LU604_01470) | 298115..298459 | + | 345 | WP_233479710.1 | TIGR03757 family integrating conjugative element protein | - |
| LU604_RS01475 (LU604_01475) | 298456..299427 | + | 972 | WP_233479711.1 | TIGR03756 family integrating conjugative element protein | - |
| LU604_RS01480 (LU604_01480) | 299439..300143 | + | 705 | Protein_286 | integrating conjugative element protein | - |
| LU604_RS01485 (LU604_01485) | 300271..300606 | + | 336 | WP_233479712.1 | hypothetical protein | - |
| LU604_RS01490 (LU604_01490) | 300617..301381 | + | 765 | Protein_288 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| LU604_RS01495 (LU604_01495) | 301714..302733 | - | 1020 | WP_046371854.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LU604_RS01500 (LU604_01500) | 302818..303099 | - | 282 | WP_233479713.1 | helix-turn-helix transcriptional regulator | - |
| LU604_RS01505 (LU604_01505) | 303205..303474 | + | 270 | WP_233479714.1 | hypothetical protein | - |
| LU604_RS01510 (LU604_01510) | 303601..304824 | - | 1224 | WP_233478977.1 | IS91 family transposase | - |
| LU604_RS01515 (LU604_01515) | 305509..305679 | - | 171 | WP_233481460.1 | hypothetical protein | - |
| LU604_RS01520 (LU604_01520) | 306002..306238 | + | 237 | WP_040465953.1 | hypothetical protein | - |
| LU604_RS01525 (LU604_01525) | 306408..306800 | + | 393 | WP_040465952.1 | hypothetical protein | - |
| LU604_RS01530 (LU604_01530) | 306870..307442 | + | 573 | WP_016193244.1 | 3'-5' exonuclease | - |
| LU604_RS01535 (LU604_01535) | 307439..308281 | + | 843 | WP_016193243.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| LU604_RS01540 (LU604_01540) | 308278..308484 | + | 207 | WP_016193242.1 | hypothetical protein | - |
| LU604_RS01545 (LU604_01545) | 308502..308768 | + | 267 | Protein_299 | hypothetical protein | - |
| LU604_RS01550 (LU604_01550) | 308816..309058 | + | 243 | WP_016193223.1 | hypothetical protein | - |
| LU604_RS01555 (LU604_01555) | 309131..309514 | + | 384 | WP_016193222.1 | hypothetical protein | - |
| LU604_RS01560 (LU604_01560) | 309514..312009 | + | 2496 | WP_052734706.1 | replication endonuclease | - |
| LU604_RS01565 (LU604_01565) | 311975..312400 | + | 426 | WP_233479718.1 | hypothetical protein | - |
| LU604_RS01570 (LU604_01570) | 312456..312731 | + | 276 | WP_233479719.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LU604_RS01575 (LU604_01575) | 312728..313087 | + | 360 | WP_046371849.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LU604_RS01580 (LU604_01580) | 313337..314032 | + | 696 | WP_233479720.1 | DNA adenine methylase | - |
| LU604_RS01585 (LU604_01585) | 314099..314320 | + | 222 | WP_006117881.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LU604_RS01590 (LU604_01590) | 314317..314700 | + | 384 | WP_046371846.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LU604_RS01595 (LU604_01595) | 315186..315689 | + | 504 | WP_233479721.1 | hypothetical protein | - |
| LU604_RS01600 (LU604_01600) | 315760..316818 | - | 1059 | WP_016193218.1 | phage portal protein | - |
| LU604_RS01605 (LU604_01605) | 316818..318548 | - | 1731 | WP_233481461.1 | terminase family protein | - |
| LU604_RS01610 (LU604_01610) | 318708..319544 | + | 837 | WP_016193215.1 | GPO family capsid scaffolding protein | - |
| LU604_RS01615 (LU604_01615) | 319568..320617 | + | 1050 | WP_016193214.1 | phage major capsid protein, P2 family | - |
| LU604_RS01620 (LU604_01620) | 320663..321520 | + | 858 | WP_233479724.1 | phage terminase small subunit | - |
| LU604_RS01625 (LU604_01625) | 321617..322141 | + | 525 | WP_016193212.1 | head completion/stabilization protein | - |
| LU604_RS01630 (LU604_01630) | 322141..322341 | + | 201 | WP_016193211.1 | tail protein X | - |
| LU604_RS01635 (LU604_01635) | 322332..322634 | + | 303 | WP_016193210.1 | hypothetical protein | - |
| LU604_RS01640 (LU604_01640) | 322618..323163 | + | 546 | WP_016193209.1 | lysozyme | - |
| LU604_RS01645 (LU604_01645) | 323160..323675 | + | 516 | WP_016193208.1 | DUF2514 family protein | - |
| LU604_RS01650 (LU604_01650) | 323680..324141 | + | 462 | WP_016193207.1 | phage tail protein | - |
| LU604_RS01655 (LU604_01655) | 324138..324776 | + | 639 | WP_016193206.1 | phage virion morphogenesis protein | - |
| LU604_RS01660 (LU604_01660) | 324773..325348 | + | 576 | WP_016193205.1 | phage baseplate assembly protein V | - |
| LU604_RS01665 (LU604_01665) | 325345..325713 | + | 369 | WP_016193204.1 | GPW/gp25 family protein | - |
| LU604_RS01670 (LU604_01670) | 325700..326596 | + | 897 | WP_016193203.1 | baseplate J/gp47 family protein | - |
| LU604_RS01675 (LU604_01675) | 326589..327203 | + | 615 | WP_016193202.1 | phage tail protein I | - |
| LU604_RS01680 (LU604_01680) | 327193..328194 | + | 1002 | WP_233479729.1 | phage tail protein | - |
| LU604_RS01685 (LU604_01685) | 328194..328790 | + | 597 | WP_016193200.1 | tail fiber assembly protein | - |
| LU604_RS01690 (LU604_01690) | 328945..329433 | - | 489 | WP_016193199.1 | phage tail protein | - |
| LU604_RS01695 (LU604_01695) | 329446..330555 | - | 1110 | Protein_329 | phage tail tape measure protein | - |
| LU604_RS01700 (LU604_01700) | 330483..331718 | - | 1236 | WP_233481637.1 | phage tail tape measure protein | - |
| LU604_RS01705 (LU604_01705) | 332326..332481 | - | 156 | WP_072052787.1 | GpE family phage tail protein | - |
| LU604_RS01710 (LU604_01710) | 332487..332804 | - | 318 | WP_046371823.1 | phage tail assembly protein | - |
| LU604_RS01715 (LU604_01715) | 332853..333368 | - | 516 | WP_006117904.1 | phage major tail tube protein | - |
| LU604_RS01720 (LU604_01720) | 333369..334550 | - | 1182 | WP_233479730.1 | phage tail sheath family protein | - |
| LU604_RS01725 (LU604_01725) | 334701..335837 | + | 1137 | WP_233479731.1 | phage late control D family protein | - |
| LU604_RS01730 (LU604_01730) | 335876..336124 | + | 249 | WP_072052782.1 | ogr/Delta-like zinc finger family protein | - |
| LU604_RS01735 (LU604_01735) | 336306..336917 | + | 612 | WP_233479732.1 | hypothetical protein | - |
| LU604_RS01740 (LU604_01740) | 337065..338015 | + | 951 | WP_233479733.1 | DUF1281 domain-containing protein | - |
| LU604_RS01745 (LU604_01745) | 338143..338850 | + | 708 | WP_233479734.1 | N-6 DNA methylase | - |
| LU604_RS01750 (LU604_01750) | 339023..339457 | + | 435 | WP_233479735.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LU604_RS01755 (LU604_01755) | 339457..340721 | + | 1265 | Protein_341 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LU604_RS01760 (LU604_01760) | 340859..341899 | + | 1041 | WP_233478553.1 | IS481 family transposase ISErsp1 | Transposase |
| LU604_RS01765 (LU604_01765) | 342128..342283 | - | 156 | WP_233479736.1 | hypothetical protein | - |
| LU604_RS01770 (LU604_01770) | 342377..342610 | - | 234 | WP_233479737.1 | hypothetical protein | - |
| LU604_RS01775 (LU604_01775) | 342651..343100 | - | 450 | WP_233479738.1 | class I SAM-dependent methyltransferase | - |
| LU604_RS01780 (LU604_01780) | 343093..343368 | - | 276 | WP_233479739.1 | hypothetical protein | - |
| LU604_RS01785 (LU604_01785) | 343361..343639 | - | 279 | WP_016192674.1 | hypothetical protein | - |
| LU604_RS01790 (LU604_01790) | 343677..343940 | - | 264 | WP_233479740.1 | LysR family transcriptional regulator | - |
| LU604_RS01795 (LU604_01795) | 343953..344495 | - | 543 | WP_233479741.1 | hypothetical protein | - |
| LU604_RS01800 (LU604_01800) | 344550..344786 | - | 237 | Protein_350 | conjugal transfer protein TraF | - |
| LU604_RS01805 (LU604_01805) | 344896..345864 | - | 969 | WP_233479742.1 | conjugal transfer protein TraE | - |
| LU604_RS01810 (LU604_01810) | 346039..346596 | - | 558 | WP_233479743.1 | hypothetical protein | - |
| LU604_RS01815 (LU604_01815) | 346784..347191 | + | 408 | WP_233481462.1 | hypothetical protein | - |
| LU604_RS01820 (LU604_01820) | 347094..347555 | + | 462 | WP_233479745.1 | TraI domain-containing protein | - |
| LU604_RS01825 (LU604_01825) | 347581..348309 | + | 729 | WP_233479746.1 | DNA-binding domain-containing protein | - |
| LU604_RS01830 (LU604_01830) | 348343..349302 | + | 960 | WP_233479747.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LU604_RS01840 (LU604_01840) | 349946..350230 | + | 285 | WP_232426852.1 | PAAR domain-containing protein | - |
| LU604_RS01845 (LU604_01845) | 350493..350741 | + | 249 | WP_233479749.1 | hypothetical protein | - |
| LU604_RS01850 (LU604_01850) | 351068..351853 | + | 786 | Protein_359 | IS5 family transposase ISPrst3 | Transposase |
| LU604_RS01860 (LU604_01860) | 352716..353362 | + | 647 | Protein_361 | transposase | - |
| LU604_RS01865 (LU604_01865) | 353541..355229 | - | 1689 | WP_233480723.1 | protein-disulfide reductase DsbD | - |
| LU604_RS01870 (LU604_01870) | 355424..356725 | - | 1302 | WP_233479751.1 | anaerobic C4-dicarboxylate transporter | - |
| LU604_RS01875 (LU604_01875) | 356841..356984 | - | 144 | WP_233479752.1 | hypothetical protein | - |
| LU604_RS01880 (LU604_01880) | 356989..357224 | - | 236 | Protein_365 | lyase family protein | - |
| LU604_RS01885 (LU604_01885) | 357572..358027 | + | 456 | WP_233479753.1 | FxsA family protein | - |
| LU604_RS01890 (LU604_01890) | 358242..358535 | + | 294 | WP_233480724.1 | co-chaperone GroES | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|