MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 68396 bp
Accession: NZ_CP089935 Location: 1..68396 Organism: Erwinia tracheiphila strain SCR3 Replicon: plasmid pETR001-b
Accession: NZ_CP089935 Location: 1..68396 Organism: Erwinia tracheiphila strain SCR3 Replicon: plasmid pETR001-b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LU632_RS25330 (LU632_25330) | 214..840 | + | 627 | WP_233480933.1 | DUF5710 domain-containing protein | - |
| LU632_RS25335 (LU632_25335) | 782..3604 | + | 2823 | WP_233480934.1 | hypothetical protein | - |
| LU632_RS25340 (LU632_25340) | 3612..4055 | + | 444 | WP_233480935.1 | hypothetical protein | - |
| LU632_RS25345 (LU632_25345) | 4156..4776 | + | 621 | WP_233480936.1 | hypothetical protein | VF |
| LU632_RS25350 (LU632_25350) | 4792..5073 | + | 282 | WP_233480937.1 | hypothetical protein | - |
| LU632_RS25355 (LU632_25355) | 5134..5799 | + | 666 | WP_233480968.1 | hypothetical protein | VF |
| LU632_RS25360 (LU632_25360) | 5802..7061 | + | 1260 | WP_233480938.1 | conjugal transfer protein TraO | - |
| LU632_RS25365 (LU632_25365) | 7073..7867 | + | 795 | WP_233480939.1 | hypothetical protein | - |
| LU632_RS25370 (LU632_25370) | 7867..8394 | + | 528 | WP_233480940.1 | conjugal transfer protein TraQ | - |
| LU632_RS25375 (LU632_25375) | 8421..8804 | + | 384 | WP_233480941.1 | hypothetical protein | - |
| LU632_RS25380 (LU632_25380) | 8856..9809 | + | 954 | WP_233480942.1 | hypothetical protein | - |
| LU632_RS25385 (LU632_25385) | 9833..12910 | + | 3078 | WP_233480943.1 | ATP-binding protein | - |
| LU632_RS25390 (LU632_25390) | 12925..14121 | + | 1197 | WP_233480944.1 | conjugal transfer protein TraW | - |
| LU632_RS25395 (LU632_25395) | 14118..14630 | + | 513 | WP_233480945.1 | conjugal transfer protein TraX | - |
| LU632_RS25400 (LU632_25400) | 14655..16826 | + | 2172 | WP_233480946.1 | DotA/TraY family protein | - |
| LU632_RS25405 (LU632_25405) | 16916..17167 | + | 252 | WP_233480947.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LU632_RS25410 (LU632_25410) | 17164..17451 | + | 288 | WP_233480948.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LU632_RS25415 (LU632_25415) | 17468..18148 | + | 681 | WP_233480949.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LU632_RS25420 (LU632_25420) | 18234..19505 | + | 1272 | WP_233480950.1 | conjugal transfer protein TrbA | - |
| LU632_RS25425 (LU632_25425) | 19510..20574 | + | 1065 | WP_233480951.1 | thioredoxin fold domain-containing protein | - |
| LU632_RS25430 (LU632_25430) | 20585..22915 | + | 2331 | WP_233480952.1 | hypothetical protein | VF |
| LU632_RS25435 (LU632_25435) | 22884..23357 | + | 474 | WP_233480953.1 | Phospholipase D | VF |
| LU632_RS25440 (LU632_25440) | 23681..24205 | - | 525 | WP_233480954.1 | hypothetical protein | - |
| LU632_RS25445 (LU632_25445) | 24220..26151 | - | 1932 | WP_233480955.1 | Protein TraI | Relaxase |
| LU632_RS25450 (LU632_25450) | 26153..26497 | - | 345 | WP_233480956.1 | plasmid mobilization protein MobA | - |
| LU632_RS25455 (LU632_25455) | 26776..27087 | + | 312 | WP_233480957.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| LU632_RS25460 (LU632_25460) | 27261..28094 | - | 834 | WP_233480958.1 | DUF932 domain-containing protein | - |
| LU632_RS25465 (LU632_25465) | 28513..28779 | - | 267 | WP_233480959.1 | hypothetical protein | - |
| LU632_RS25470 (LU632_25470) | 28872..29312 | - | 441 | WP_233480960.1 | DUF1419 domain-containing protein | - |
| LU632_RS25475 (LU632_25475) | 29278..29436 | - | 159 | WP_233480961.1 | hypothetical protein | - |
| LU632_RS25480 (LU632_25480) | 29942..30181 | + | 240 | WP_233480962.1 | helix-turn-helix transcriptional regulator | - |
| LU632_RS25485 (LU632_25485) | 30743..30889 | - | 147 | Protein_32 | hypothetical protein | - |
| LU632_RS25490 (LU632_25490) | 30946..31524 | - | 579 | WP_233480963.1 | antirestriction protein | - |
| LU632_RS25495 (LU632_25495) | 31942..32256 | - | 315 | WP_233480964.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| LU632_RS25500 (LU632_25500) | 32249..32593 | - | 345 | WP_233480965.1 | toxin | Toxin Detail |
| LU632_RS25505 (LU632_25505) | 32846..33148 | - | 303 | WP_233480966.1 | methyltransferase | - |
| LU632_RS25510 (LU632_25510) | 33297..33560 | - | 264 | Protein_37 | transposase | - |
| LU632_RS25515 (LU632_25515) | 33649..34872 | + | 1224 | WP_233480488.1 | IS91 family transposase ISVa3 | Transposase |
| LU632_RS25520 (LU632_25520) | 35506..36774 | + | 1269 | WP_233480901.1 | aspartate aminotransferase family protein | - |
| LU632_RS25525 (LU632_25525) | 36774..37847 | + | 1074 | WP_233480902.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| LU632_RS25530 (LU632_25530) | 37844..38482 | + | 639 | WP_233480903.1 | HAD family phosphatase | - |
| LU632_RS25535 (LU632_25535) | 38545..39690 | + | 1146 | WP_233480904.1 | MFS transporter | - |
| LU632_RS25540 (LU632_25540) | 39739..40317 | + | 579 | WP_233480905.1 | DUF1349 domain-containing protein | - |
| LU632_RS25545 (LU632_25545) | 40453..40623 | - | 171 | Protein_44 | helix-turn-helix domain-containing protein | - |
| LU632_RS25550 (LU632_25550) | 40818..41318 | - | 501 | Protein_45 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LU632_RS25555 (LU632_25555) | 41322..41429 | + | 108 | Protein_46 | IS6 family transposase | - |
| LU632_RS25560 (LU632_25560) | 41769..42395 | + | 627 | WP_233480906.1 | ParA family plasmid-partitioning AAA ATPase | - |
| LU632_RS25565 (LU632_25565) | 42392..42694 | + | 303 | WP_233480907.1 | hypothetical protein | - |
| LU632_RS25570 (LU632_25570) | 42808..42987 | - | 180 | WP_233480908.1 | ribbon-helix-helix domain-containing protein | - |
| LU632_RS25575 (LU632_25575) | 43178..44530 | - | 1353 | WP_267932947.1 | hypothetical protein | - |
| LU632_RS25580 (LU632_25580) | 44539..45324 | - | 786 | WP_233480910.1 | site-specific integrase | - |
| LU632_RS25585 (LU632_25585) | 45363..45974 | - | 612 | WP_233480911.1 | hypothetical protein | - |
| LU632_RS25590 (LU632_25590) | 46041..46349 | - | 309 | WP_233480912.1 | DUF3426 domain-containing protein | - |
| LU632_RS25595 (LU632_25595) | 48029..49252 | + | 1224 | WP_233478549.1 | IS91 family transposase ISVa3 | Transposase |
| LU632_RS25600 (LU632_25600) | 49339..50109 | + | 771 | WP_233480913.1 | hypothetical protein | - |
| LU632_RS25605 (LU632_25605) | 51017..51919 | - | 903 | WP_233480914.1 | Replication protein | - |
| LU632_RS25610 (LU632_25610) | 53664..54122 | + | 459 | WP_233480915.1 | transcription termination/antitermination NusG family protein | - |
| LU632_RS25615 (LU632_25615) | 54217..54465 | + | 249 | WP_233480916.1 | hypothetical protein | - |
| LU632_RS25620 (LU632_25620) | 54483..54683 | + | 201 | WP_233480917.1 | hypothetical protein | - |
| LU632_RS25625 (LU632_25625) | 54761..55768 | + | 1008 | WP_233480918.1 | hypothetical protein | VF |
| LU632_RS25630 (LU632_25630) | 55768..56202 | + | 435 | WP_233480919.1 | type IV pilus biogenesis protein PilM | - |
| LU632_RS25635 (LU632_25635) | 56221..57852 | + | 1632 | WP_233480920.1 | Outer membrane lipoprotein BfpB | VF |
| LU632_RS25640 (LU632_25640) | 57855..59150 | + | 1296 | WP_233480921.1 | type 4b pilus protein PilO2 | - |
| LU632_RS25645 (LU632_25645) | 59137..59697 | + | 561 | WP_233480922.1 | type IV pilus biogenesis protein PilP | - |
| LU632_RS25650 (LU632_25650) | 59705..61210 | + | 1506 | WP_233480923.1 | Type II secretion system protein E | VF |
| LU632_RS25655 (LU632_25655) | 61207..62340 | + | 1134 | WP_233480924.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| LU632_RS25660 (LU632_25660) | 62401..62994 | + | 594 | WP_233480925.1 | hypothetical protein | VF |
| LU632_RS25665 (LU632_25665) | 63064..63540 | + | 477 | WP_233480926.1 | hypothetical protein | VF |
| LU632_RS25670 (LU632_25670) | 63585..64202 | + | 618 | WP_233480927.1 | hypothetical protein | VF |
| LU632_RS25675 (LU632_25675) | 64208..65599 | + | 1392 | WP_233480928.1 | hypothetical protein | VF |
| LU632_RS25680 (LU632_25680) | 65632..65835 | + | 204 | WP_233480929.1 | hypothetical protein | - |
| LU632_RS25685 (LU632_25685) | 65946..66398 | + | 453 | WP_233480967.1 | DotD/TraH family lipoprotein | - |
| LU632_RS25690 (LU632_25690) | 66395..67183 | + | 789 | WP_233480930.1 | hypothetical protein | VF |
| LU632_RS25695 (LU632_25695) | 67180..68337 | + | 1158 | WP_233480931.1 | Twitching mobility protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|