MGE detailed information
MGE type: Prophage MGE length: 52069 bp
Accession: NZ_CP089934 Location: 301719..353787 Organism: Erwinia tracheiphila strain SCR3 Replicon: chromosome
Accession: NZ_CP089934 Location: 301719..353787 Organism: Erwinia tracheiphila strain SCR3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LU632_RS01445 (LU632_01445) | 297549..298085 | + | 537 | Protein_279 | ATP-binding protein | - |
| LU632_RS01450 (LU632_01450) | 298120..298464 | + | 345 | WP_233479710.1 | TIGR03757 family integrating conjugative element protein | - |
| LU632_RS01455 (LU632_01455) | 298461..299432 | + | 972 | WP_233479711.1 | TIGR03756 family integrating conjugative element protein | - |
| LU632_RS01460 (LU632_01460) | 299444..300148 | + | 705 | Protein_282 | integrating conjugative element protein | - |
| LU632_RS01465 (LU632_01465) | 300276..300611 | + | 336 | WP_233479712.1 | hypothetical protein | - |
| LU632_RS01470 (LU632_01470) | 300622..301386 | + | 765 | Protein_284 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| LU632_RS01475 (LU632_01475) | 301719..302738 | - | 1020 | WP_046371854.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LU632_RS01480 (LU632_01480) | 302823..303104 | - | 282 | WP_233479713.1 | helix-turn-helix transcriptional regulator | - |
| LU632_RS01485 (LU632_01485) | 303210..303479 | + | 270 | WP_233479714.1 | hypothetical protein | - |
| LU632_RS01490 (LU632_01490) | 303606..304829 | - | 1224 | WP_233478977.1 | IS91 family transposase | - |
| LU632_RS01495 (LU632_01495) | 304828..305094 | + | 267 | WP_233479715.1 | hypothetical protein | - |
| LU632_RS01500 (LU632_01500) | 305326..305508 | + | 183 | WP_016193246.1 | hypothetical protein | - |
| LU632_RS01505 (LU632_01505) | 305477..305716 | + | 240 | WP_016193245.1 | hypothetical protein | - |
| LU632_RS01510 (LU632_01510) | 306460..306852 | + | 393 | WP_040465952.1 | hypothetical protein | - |
| LU632_RS01515 (LU632_01515) | 306934..307494 | + | 561 | WP_233479716.1 | 3'-5' exonuclease | - |
| LU632_RS01520 (LU632_01520) | 307491..308333 | + | 843 | WP_233479717.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| LU632_RS01525 (LU632_01525) | 308330..308536 | + | 207 | WP_016193242.1 | hypothetical protein | - |
| LU632_RS01530 (LU632_01530) | 308868..309110 | + | 243 | WP_016193223.1 | hypothetical protein | - |
| LU632_RS01535 (LU632_01535) | 309183..309566 | + | 384 | WP_016193222.1 | hypothetical protein | - |
| LU632_RS01540 (LU632_01540) | 309566..312061 | + | 2496 | WP_052734703.1 | replication endonuclease | - |
| LU632_RS01545 (LU632_01545) | 312027..312452 | + | 426 | WP_233479718.1 | hypothetical protein | - |
| LU632_RS01550 (LU632_01550) | 312508..312783 | + | 276 | WP_233479719.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LU632_RS01555 (LU632_01555) | 312780..313139 | + | 360 | WP_046371849.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LU632_RS01560 (LU632_01560) | 313389..314084 | + | 696 | WP_233479720.1 | DNA adenine methylase | - |
| LU632_RS01565 (LU632_01565) | 314151..314372 | + | 222 | WP_006117881.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LU632_RS01570 (LU632_01570) | 314369..314752 | + | 384 | WP_046371846.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LU632_RS01575 (LU632_01575) | 315238..315741 | + | 504 | WP_233479721.1 | hypothetical protein | - |
| LU632_RS01580 (LU632_01580) | 315812..316870 | - | 1059 | WP_233479722.1 | phage portal protein | - |
| LU632_RS01585 (LU632_01585) | 316870..318600 | - | 1731 | WP_233479723.1 | terminase family protein | - |
| LU632_RS01590 (LU632_01590) | 318761..319597 | + | 837 | WP_016193215.1 | GPO family capsid scaffolding protein | - |
| LU632_RS01595 (LU632_01595) | 319621..320670 | + | 1050 | WP_016193214.1 | phage major capsid protein, P2 family | - |
| LU632_RS01600 (LU632_01600) | 320716..321573 | + | 858 | WP_233479724.1 | phage terminase small subunit | - |
| LU632_RS01605 (LU632_01605) | 321670..322194 | + | 525 | WP_016193212.1 | head completion/stabilization protein | - |
| LU632_RS01610 (LU632_01610) | 322194..322394 | + | 201 | WP_016193211.1 | tail protein X | - |
| LU632_RS01615 (LU632_01615) | 322385..322687 | + | 303 | WP_016193210.1 | hypothetical protein | - |
| LU632_RS01620 (LU632_01620) | 322671..323216 | + | 546 | WP_016193209.1 | lysozyme | - |
| LU632_RS01625 (LU632_01625) | 323213..323728 | + | 516 | WP_233479725.1 | DUF2514 family protein | - |
| LU632_RS01630 (LU632_01630) | 323733..324194 | + | 462 | WP_233479726.1 | phage tail protein | - |
| LU632_RS01635 (LU632_01635) | 324191..324829 | + | 639 | WP_016193206.1 | phage virion morphogenesis protein | - |
| LU632_RS01640 (LU632_01640) | 324826..325401 | + | 576 | WP_233479727.1 | phage baseplate assembly protein V | - |
| LU632_RS01645 (LU632_01645) | 325398..325766 | + | 369 | WP_016193204.1 | GPW/gp25 family protein | - |
| LU632_RS01650 (LU632_01650) | 325753..326649 | + | 897 | WP_233479728.1 | baseplate J/gp47 family protein | - |
| LU632_RS01655 (LU632_01655) | 326642..327256 | + | 615 | WP_016193202.1 | phage tail protein I | - |
| LU632_RS01660 (LU632_01660) | 327246..328247 | + | 1002 | WP_233479729.1 | phage tail protein | - |
| LU632_RS01665 (LU632_01665) | 328247..328843 | + | 597 | WP_016193200.1 | tail fiber assembly protein | - |
| LU632_RS01670 (LU632_01670) | 328998..329486 | - | 489 | WP_016193199.1 | phage tail protein | - |
| LU632_RS01675 (LU632_01675) | 329499..332471 | - | 2973 | WP_233480721.1 | phage tail tape measure protein | - |
| LU632_RS01680 (LU632_01680) | 332458..332613 | - | 156 | WP_072052787.1 | GpE family phage tail protein | - |
| LU632_RS01685 (LU632_01685) | 332619..332936 | - | 318 | WP_046371823.1 | phage tail assembly protein | - |
| LU632_RS01690 (LU632_01690) | 332985..333500 | - | 516 | WP_006117904.1 | phage major tail tube protein | - |
| LU632_RS01695 (LU632_01695) | 333501..334682 | - | 1182 | WP_233479730.1 | phage tail sheath family protein | - |
| LU632_RS01700 (LU632_01700) | 334833..335969 | + | 1137 | WP_233479731.1 | phage late control D family protein | - |
| LU632_RS01705 (LU632_01705) | 336008..336256 | + | 249 | WP_072052782.1 | ogr/Delta-like zinc finger family protein | - |
| LU632_RS01710 (LU632_01710) | 336438..337049 | + | 612 | WP_233479732.1 | hypothetical protein | - |
| LU632_RS01715 (LU632_01715) | 337197..338147 | + | 951 | WP_233479733.1 | DUF1281 domain-containing protein | - |
| LU632_RS01720 (LU632_01720) | 338275..338982 | + | 708 | WP_233479734.1 | N-6 DNA methylase | - |
| LU632_RS01725 (LU632_01725) | 339155..339589 | + | 435 | WP_233479735.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LU632_RS01730 (LU632_01730) | 339589..340854 | + | 1266 | WP_233480722.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LU632_RS01735 (LU632_01735) | 340992..342032 | + | 1041 | WP_233478553.1 | IS481 family transposase ISErsp1 | Transposase |
| LU632_RS01740 (LU632_01740) | 342261..342416 | - | 156 | WP_233479736.1 | hypothetical protein | - |
| LU632_RS01745 (LU632_01745) | 342510..342743 | - | 234 | WP_233479737.1 | hypothetical protein | - |
| LU632_RS01750 (LU632_01750) | 342784..343233 | - | 450 | WP_233479738.1 | class I SAM-dependent methyltransferase | - |
| LU632_RS01755 (LU632_01755) | 343226..343501 | - | 276 | WP_233479739.1 | hypothetical protein | - |
| LU632_RS01760 (LU632_01760) | 343494..343772 | - | 279 | WP_016192674.1 | hypothetical protein | - |
| LU632_RS01765 (LU632_01765) | 343810..344073 | - | 264 | WP_233479740.1 | LysR family transcriptional regulator | - |
| LU632_RS01770 (LU632_01770) | 344086..344628 | - | 543 | WP_233479741.1 | hypothetical protein | - |
| LU632_RS01775 (LU632_01775) | 344683..344919 | - | 237 | Protein_345 | conjugal transfer protein TraF | - |
| LU632_RS01780 (LU632_01780) | 345029..345997 | - | 969 | WP_233479742.1 | conjugal transfer protein TraE | - |
| LU632_RS01785 (LU632_01785) | 346172..346729 | - | 558 | WP_233479743.1 | hypothetical protein | - |
| LU632_RS01790 (LU632_01790) | 346889..347059 | + | 171 | WP_233479744.1 | hypothetical protein | - |
| LU632_RS01795 (LU632_01795) | 347227..347688 | + | 462 | WP_233479745.1 | TraI domain-containing protein | - |
| LU632_RS01800 (LU632_01800) | 347714..348442 | + | 729 | WP_233479746.1 | DNA-binding domain-containing protein | - |
| LU632_RS01805 (LU632_01805) | 348476..349435 | + | 960 | WP_233479747.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LU632_RS01815 (LU632_01815) | 350037..350363 | + | 327 | WP_233479748.1 | PAAR domain-containing protein | - |
| LU632_RS01820 (LU632_01820) | 350626..350874 | + | 249 | WP_233479749.1 | hypothetical protein | - |
| LU632_RS01825 (LU632_01825) | 351201..351986 | + | 786 | Protein_354 | IS5 family transposase ISPrst3 | Transposase |
| LU632_RS01835 (LU632_01835) | 352849..353495 | + | 647 | Protein_356 | transposase | - |
| LU632_RS01840 (LU632_01840) | 353674..355362 | - | 1689 | WP_233480723.1 | protein-disulfide reductase DsbD | - |
| LU632_RS01845 (LU632_01845) | 355557..356858 | - | 1302 | WP_233479751.1 | anaerobic C4-dicarboxylate transporter | - |
| LU632_RS01850 (LU632_01850) | 356974..357117 | - | 144 | WP_233479752.1 | hypothetical protein | - |
| LU632_RS01855 (LU632_01855) | 357122..357357 | - | 236 | Protein_360 | lyase family protein | - |
| LU632_RS01860 (LU632_01860) | 357705..358160 | + | 456 | WP_233479753.1 | FxsA family protein | - |
| LU632_RS01865 (LU632_01865) | 358375..358668 | + | 294 | WP_233480724.1 | co-chaperone GroES | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|