MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 77894 bp
Accession: NZ_CP089932 Location: 4819245..4897138 Organism: Erwinia tracheiphila strain BHKY Replicon: chromosome
Accession: NZ_CP089932 Location: 4819245..4897138 Organism: Erwinia tracheiphila strain BHKY Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LU633_RS24900 (LU633_24900) | 4814891..4816015 | + | 1125 | WP_016192334.1 | uroporphyrinogen-III C-methyltransferase | - |
| LU633_RS24905 (LU633_24905) | 4816018..4817208 | + | 1191 | WP_016192335.1 | protoheme IX biogenesis protein HemY | - |
| LU633_RS24935 (LU633_24935) | 4819334..4820074 | - | 741 | WP_016192336.1 | lipopolysaccharide N-acetylmannosaminouronosyltransferase | - |
| LU633_RS24940 (LU633_24940) | 4820105..4821454 | - | 1350 | WP_016192337.1 | ECA oligosaccharide polymerase | - |
| LU633_RS24945 (LU633_24945) | 4821451..4822518 | - | 1068 | WP_016192338.1 | TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase | - |
| LU633_RS24950 (LU633_24950) | 4822515..4823765 | - | 1251 | WP_016192339.1 | lipid III flippase WzxE | - |
| LU633_RS24955 (LU633_24955) | 4823767..4824897 | - | 1131 | WP_016192340.1 | dTDP-4-amino-4,6-dideoxygalactose transaminase | VF |
| LU633_RS24960 (LU633_24960) | 4824902..4825612 | - | 711 | WP_016192341.1 | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | - |
| LU633_RS24965 (LU633_24965) | 4825609..4826871 | - | 1263 | WP_016192342.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | VF |
| LU633_RS24970 (LU633_24970) | 4826868..4827998 | - | 1131 | WP_016192343.1 | UDP-N-acetylglucosamine 2-epimerase | VF |
| LU633_RS24975 (LU633_24975) | 4828048..4829076 | - | 1029 | WP_016192344.1 | ECA polysaccharide chain length modulation protein | - |
| LU633_RS24980 (LU633_24980) | 4829131..4830210 | - | 1080 | WP_040465773.1 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase | VF |
| LU633_RS24985 (LU633_24985) | 4830525..4831784 | - | 1260 | WP_016192346.1 | Transcription termination factor Rho | VF |
| LU633_RS24990 (LU633_24990) | 4832243..4832575 | - | 333 | WP_016192347.1 | thioredoxin TrxA | - |
| LU633_RS24995 (LU633_24995) | 4832693..4833982 | + | 1290 | WP_016192348.1 | ATP-dependent RNA helicase RhlB | - |
| LU633_RS25000 (LU633_25000) | 4833989..4835473 | + | 1485 | WP_016192349.1 | guanosine-5'-triphosphate,3'-diphosphate diphosphatase | - |
| LU633_RS25005 (LU633_25005) | 4835499..4837220 | - | 1722 | WP_046372101.1 | type III helper protein HopAK1 | - |
| LU633_RS25010 (LU633_25010) | 4837470..4839500 | - | 2031 | WP_016192351.1 | DNA helicase Rep | - |
| LU633_RS25015 (LU633_25015) | 4839634..4840338 | - | 705 | WP_046371935.1 | IS6 family transposase IS26 | Transposase |
| LU633_RS25020 (LU633_25020) | 4840467..4841057 | - | 591 | WP_016192352.1 | Protein kinase OspG | VF |
| LU633_RS25025 (LU633_25025) | 4841128..4841385 | - | 258 | WP_016192353.1 | hypothetical protein | - |
| LU633_RS25030 (LU633_25030) | 4841562..4842679 | + | 1118 | Protein_4926 | IS200-IS605 family transposase ISEc42 | Transposase |
| LU633_RS25035 (LU633_25035) | 4843060..4843350 | + | 291 | WP_232426910.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LU633_RS25040 (LU633_25040) | 4843343..4843660 | + | 318 | WP_016192357.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LU633_RS25045 (LU633_25045) | 4843767..4844472 | + | 706 | Protein_4929 | IS6 family transposase IS26 | Transposase |
| LU633_RS25050 (LU633_25050) | 4844683..4844979 | + | 297 | WP_016192358.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LU633_RS25055 (LU633_25055) | 4844981..4845265 | + | 285 | WP_013583077.1 | putative addiction module antidote protein | Antitoxin Detail |
| LU633_RS25060 (LU633_25060) | 4845565..4846605 | + | 1041 | WP_046371791.1 | IS481 family transposase ISErsp1 | Transposase |
| LU633_RS25065 (LU633_25065) | 4846925..4848042 | + | 1118 | Protein_4933 | IS200-IS605 family transposase ISEc42 | Transposase |
| LU633_RS25070 (LU633_25070) | 4848136..4848555 | + | 420 | WP_016192361.1 | protein rep | - |
| LU633_RS25075 (LU633_25075) | 4848625..4849233 | + | 609 | WP_016192362.1 | pesticin C-terminus-like muramidase | - |
| LU633_RS25080 (LU633_25080) | 4849230..4849643 | + | 414 | WP_016192363.1 | hypothetical protein | - |
| LU633_RS25085 (LU633_25085) | 4850175..4850879 | + | 705 | WP_046371935.1 | IS6 family transposase IS26 | Transposase |
| LU633_RS25090 (LU633_25090) | 4850932..4851186 | - | 255 | Protein_4938 | hypothetical protein | - |
| LU633_RS25095 (LU633_25095) | 4851992..4852357 | - | 366 | WP_016192365.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LU633_RS25100 (LU633_25100) | 4852357..4852629 | - | 273 | WP_016192366.1 | hypothetical protein | - |
| LU633_RS25105 (LU633_25105) | 4852695..4853443 | - | 749 | Protein_4941 | plasmid SOS inhibition protein A | - |
| LU633_RS25110 (LU633_25110) | 4853440..4853856 | - | 417 | WP_016192369.1 | conjugation system SOS inhibitor PsiB | - |
| LU633_RS25115 (LU633_25115) | 4853915..4854097 | - | 183 | Protein_4943 | hypothetical protein | - |
| LU633_RS25120 (LU633_25120) | 4854143..4854847 | - | 705 | WP_046371935.1 | IS6 family transposase IS26 | Transposase |
| LU633_RS25125 (LU633_25125) | 4854884..4855132 | - | 249 | WP_046372103.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| LU633_RS25130 (LU633_25130) | 4855904..4857187 | - | 1284 | WP_052734715.1 | IS91 family transposase | - |
| LU633_RS25135 (LU633_25135) | 4857297..4857743 | - | 447 | WP_016192372.1 | winged helix-turn-helix domain-containing protein | - |
| LU633_RS25140 (LU633_25140) | 4858593..4859266 | + | 674 | Protein_4948 | IS1 family transposase ISEic1 | Transposase |
| LU633_RS25145 (LU633_25145) | 4859610..4859771 | + | 162 | Protein_4949 | NCS2 family permease | - |
| LU633_RS25150 (LU633_25150) | 4859910..4860632 | - | 723 | WP_016192375.1 | hypothetical protein | - |
| LU633_RS25155 (LU633_25155) | 4861036..4862170 | - | 1135 | Protein_4951 | IS256 family transposase ISEc39 | Transposase |
| LU633_RS25160 (LU633_25160) | 4862375..4862586 | - | 212 | Protein_4952 | IS630 family transposase | - |
| LU633_RS25165 (LU633_25165) | 4862723..4863427 | + | 705 | WP_016192377.1 | hypothetical protein | - |
| LU633_RS25170 (LU633_25170) | 4863424..4863858 | + | 435 | WP_016192378.1 | hypothetical protein | - |
| LU633_RS25860 | 4864013..4864375 | - | 363 | WP_016192379.1 | IS91 family transposase ISVa3 | Transposase |
| LU633_RS25865 | 4864375..4864638 | - | 264 | WP_052734716.1 | IS91 family transposase ISVa3 | Transposase |
| LU633_RS25180 (LU633_25180) | 4864884..4866167 | - | 1284 | WP_052734717.1 | IS91 family transposase | - |
| LU633_RS25185 (LU633_25185) | 4866383..4867080 | + | 698 | WP_233481963.1 | IS1 family transposase ISEic1 | Transposase |
| LU633_RS25190 (LU633_25190) | 4867176..4867511 | + | 336 | WP_046372108.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LU633_RS25195 (LU633_25195) | 4867508..4867864 | + | 357 | WP_006122339.1 | hypothetical protein | - |
| LU633_RS25200 (LU633_25200) | 4868272..4868577 | + | 306 | WP_040465786.1 | hypothetical protein | - |
| LU633_RS25205 (LU633_25205) | 4868760..4868933 | + | 174 | WP_016192381.1 | hypothetical protein | - |
| LU633_RS25210 (LU633_25210) | 4869016..4869258 | + | 243 | WP_016192382.1 | hypothetical protein | - |
| LU633_RS25215 (LU633_25215) | 4869248..4869463 | + | 216 | WP_016192383.1 | hypothetical protein | - |
| LU633_RS25220 (LU633_25220) | 4869555..4869878 | + | 324 | WP_016192384.1 | hypothetical protein | - |
| LU633_RS25225 (LU633_25225) | 4869885..4870124 | + | 240 | WP_233481964.1 | hypothetical protein | - |
| LU633_RS25230 (LU633_25230) | 4870265..4870962 | + | 698 | WP_232426908.1 | IS1 family transposase ISEic1 | Transposase |
| LU633_RS25235 (LU633_25235) | 4871444..4871584 | + | 141 | WP_161796965.1 | hypothetical protein | - |
| LU633_RS25240 (LU633_25240) | 4871593..4872807 | + | 1215 | WP_046371879.1 | IS91 family transposase | - |
| LU633_RS25245 (LU633_25245) | 4873387..4874586 | - | 1200 | WP_046372110.1 | IS91 family transposase ISSbo1 | Transposase |
| LU633_RS25250 (LU633_25250) | 4874595..4874783 | - | 189 | WP_020322936.1 | hypothetical protein | - |
| LU633_RS25255 (LU633_25255) | 4874899..4875027 | + | 129 | Protein_4972 | MBL fold metallo-hydrolase | - |
| LU633_RS25260 (LU633_25260) | 4875036..4875422 | - | 387 | Protein_4973 | IS3 family transposase ISAlg | Transposase |
| LU633_RS25265 (LU633_25265) | 4875510..4876832 | + | 1323 | WP_046371900.1 | IS4 family transposase IS1271 | Transposase |
| LU633_RS25270 (LU633_25270) | 4876853..4877637 | - | 785 | Protein_4975 | IS3 family transposase ISSlo2 | Transposase |
| LU633_RS25275 (LU633_25275) | 4877698..4877901 | + | 204 | WP_052734718.1 | DUF1471 domain-containing protein | - |
| LU633_RS25280 (LU633_25280) | 4878070..4878745 | + | 676 | Protein_4977 | IS6 family transposase ISEas1 | Transposase |
| LU633_RS25285 (LU633_25285) | 4879265..4879771 | + | 507 | WP_233479593.1 | hypothetical protein | VF |
| LU633_RS25290 (LU633_25290) | 4879809..4881989 | + | 2181 | WP_233481967.1 | Type II secretion system protein D | VF |
| LU633_RS25295 (LU633_25295) | 4881989..4883470 | + | 1482 | WP_016192398.1 | Type II secretion system protein E | VF |
| LU633_RS25300 (LU633_25300) | 4883460..4884659 | + | 1200 | WP_016192397.1 | Type II secretion system protein F | VF |
| LU633_RS25305 (LU633_25305) | 4884682..4885125 | + | 444 | WP_016192396.1 | Type II secretion system protein G | VF |
| LU633_RS25310 (LU633_25310) | 4885127..4885522 | + | 396 | WP_016192395.1 | Type II secretion system protein I | VF |
| LU633_RS25315 (LU633_25315) | 4885519..4886070 | + | 552 | WP_016192394.1 | type II secretion system minor pseudopilin GspJ | - |
| LU633_RS25320 (LU633_25320) | 4886070..4886969 | + | 900 | WP_016192393.1 | type II secretion system protein GspK | - |
| LU633_RS25325 (LU633_25325) | 4887044..4888165 | + | 1122 | WP_233485077.1 | type II secretion system protein GspL | - |
| LU633_RS25330 (LU633_25330) | 4888155..4888601 | + | 447 | WP_016192391.1 | hypothetical protein | VF |
| LU633_RS25335 (LU633_25335) | 4888602..4889372 | + | 771 | WP_016192390.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| LU633_RS25340 (LU633_25340) | 4889499..4889801 | + | 303 | WP_040465787.1 | type II secretion system pilot lipoprotein GspS | - |
| LU633_RS25345 (LU633_25345) | 4889810..4890063 | + | 254 | Protein_4990 | transposase | - |
| LU633_RS25350 (LU633_25350) | 4890245..4890767 | + | 523 | Protein_4991 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LU633_RS25355 (LU633_25355) | 4891230..4891334 | + | 105 | Protein_4992 | IS1 family transposase | - |
| LU633_RS25360 (LU633_25360) | 4891488..4892702 | - | 1215 | WP_046371879.1 | IS91 family transposase | - |
| LU633_RS25365 (LU633_25365) | 4892711..4892851 | - | 141 | WP_161796965.1 | hypothetical protein | - |
| LU633_RS25370 (LU633_25370) | 4893246..4895114 | - | 1869 | WP_016192404.1 | low affinity potassium transporter Kup | - |
| LU633_RS25375 (LU633_25375) | 4895376..4896869 | + | 1494 | WP_016192405.1 | ATPase RavA | - |
| LU633_RS25380 (LU633_25380) | 4896866..4898329 | + | 1464 | WP_016192406.1 | ATPase RavA stimulator ViaA | - |
| LU633_RS25385 (LU633_25385) | 4898833..4898973 | + | 141 | WP_161796965.1 | hypothetical protein | - |
| LU633_RS25390 (LU633_25390) | 4898982..4900196 | + | 1215 | WP_046371879.1 | IS91 family transposase | - |
| LU633_RS25395 (LU633_25395) | 4900434..4901322 | + | 889 | Protein_5000 | transposase | - |
| LU633_RS25400 (LU633_25400) | 4901323..4901658 | + | 336 | WP_072052843.1 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|