MGE detailed information
MGE type: Prophage MGE length: 10268 bp
Accession: NZ_CP089927 Location: 1895854..1906121 Organism: Mycobacterium tuberculosis strain M20 Replicon: chromosome
Accession: NZ_CP089927 Location: 1895854..1906121 Organism: Mycobacterium tuberculosis strain M20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LV451_RS08950 | 1891242..1891700 | + | 459 | WP_003413675.1 | cadmium-induced metalloenzyme CadI | - |
| LV451_RS08955 | 1891836..1892216 | + | 381 | WP_003899407.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LV451_RS08960 | 1892213..1893709 | + | 1497 | WP_003413686.1 | ACR3 family arsenite efflux transporter | - |
| LV451_RS08965 | 1893944..1894135 | + | 192 | WP_003912823.1 | antitoxin MazE family protein | - |
| LV451_RS08970 | 1894137..1894458 | + | 322 | Protein_1772 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LV451_RS08995 | 1895426..1895857 | + | 432 | WP_003899409.1 | hypothetical protein | - |
| LV451_RS09000 | 1895854..1896852 | + | 999 | WP_003900538.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LV451_RS09005 | 1896866..1897330 | + | 465 | WP_003900539.1 | ParB N-terminal domain-containing protein | - |
| LV451_RS09010 | 1897463..1898724 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| LV451_RS09015 | 1898751..1898936 | - | 186 | WP_009935348.1 | hypothetical protein | - |
| LV451_RS09020 | 1899098..1900537 | - | 1440 | WP_009935349.1 | phage major capsid protein | - |
| LV451_RS09025 | 1900545..1901078 | - | 534 | WP_003899412.1 | HK97 family phage prohead protease | - |
| LV451_RS09030 | 1901231..1901722 | - | 492 | WP_003900541.1 | phage terminase small subunit P27 family | - |
| LV451_RS09035 | 1901889..1902212 | - | 324 | WP_003899414.1 | type II toxin-antitoxin system toxin | Toxin Detail |
| LV451_RS09040 | 1902292..1902537 | - | 246 | WP_003899415.1 | type II toxin-antitoxin system antitoxin | Antitoxin Detail |
| LV451_RS09045 | 1902534..1903961 | - | 1428 | WP_003899416.1 | DUF3631 domain-containing protein | - |
| LV451_RS09050 | 1903963..1904355 | - | 393 | WP_003899417.1 | DUF2742 domain-containing protein | - |
| LV451_RS09055 | 1904352..1904612 | - | 261 | WP_003899418.1 | helix-turn-helix domain-containing protein | - |
| LV451_RS09060 | 1904629..1904991 | - | 363 | WP_003900543.1 | hypothetical protein | - |
| LV451_RS09065 | 1904994..1906121 | - | 1128 | WP_003899420.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| LV451_RS09070 | 1906266..1906493 | - | 228 | WP_003899421.1 | hypothetical protein | - |
| LV451_RS09075 | 1906490..1906879 | - | 390 | WP_003899422.1 | hypothetical protein | - |
| LV451_RS09080 | 1906785..1907057 | + | 273 | WP_003900544.1 | hypothetical protein | - |
| LV451_RS09085 | 1907156..1907389 | + | 234 | WP_003413717.1 | hypothetical protein | - |
| LV451_RS09090 | 1907400..1907654 | + | 255 | WP_003413719.1 | hypothetical protein | - |
| LV451_RS09095 | 1908002..1908283 | + | 282 | WP_003899423.1 | hypothetical protein | - |
| LV451_RS09100 | 1908374..1909156 | + | 783 | Protein_1794 | IS256-like element IS1081 family transposase | - |
| LV451_RS09105 | 1909199..1909957 | + | 759 | WP_003413845.1 | Clp protease N-terminal domain-containing protein | - |
| LV451_RS09110 | 1910036..1910557 | + | 522 | WP_003917048.1 | hypothetical protein | - |
| LV451_RS09115 | 1910586..1911056 | + | 471 | WP_003413852.1 | N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA120 | NC_000962 | 2970551..2980818 | 0 |