MGE detailed information
MGE type: IScluster/Tn MGE length: 4943 bp
Accession: NZ_CP089780 Location: 3801733..3806675 Organism: Mycobacterium tuberculosis strain M0003941-3 Replicon: chromosome
Accession: NZ_CP089780 Location: 3801733..3806675 Organism: Mycobacterium tuberculosis strain M0003941-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ75_RS17865 (LVJ75_17850) | 3797568..3798458 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| LVJ75_RS17870 (LVJ75_17855) | 3798467..3800305 | - | 1839 | WP_003918607.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| LVJ75_RS17875 (LVJ75_17860) | 3800302..3801291 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| LVJ75_RS17880 (LVJ75_17865) | 3801291..3801680 | - | 390 | Protein_3532 | polyprenyl synthetase family protein | - |
| LVJ75_RS17885 (LVJ75_17870) | 3801733..3802994 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| LVJ75_RS17890 (LVJ75_17875) | 3803036..3803701 | - | 666 | Protein_3534 | polyprenyl synthetase family protein | - |
| LVJ75_RS17895 (LVJ75_17880) | 3804455..3804847 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LVJ75_RS17900 (LVJ75_17885) | 3804847..3805122 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LVJ75_RS17905 (LVJ75_17890) | 3805304..3806675 | + | 1372 | Protein_3537 | ISNCY family transposase ISRjo3 | Transposase |
| LVJ75_RS17910 (LVJ75_17895) | 3806865..3809042 | + | 2178 | WP_016330440.1 | PE family protein | - |
| LVJ75_RS17915 (LVJ75_17900) | 3809113..3809985 | - | 873 | WP_003906098.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| LVJ75_RS17920 (LVJ75_17905) | 3810059..3810769 | + | 711 | WP_003417932.1 | histidine phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.008 |