MGE detailed information
MGE type: Prophage MGE length: 25147 bp
Accession: NZ_CP089780 Location: 3544003..3569149 Organism: Mycobacterium tuberculosis strain M0003941-3 Replicon: chromosome
Accession: NZ_CP089780 Location: 3544003..3569149 Organism: Mycobacterium tuberculosis strain M0003941-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ75_RS16750 (LVJ75_16735) | 3539467..3540954 | + | 1488 | WP_003416624.1 | amidase | - |
| LVJ75_RS16755 (LVJ75_16740) | 3540951..3541907 | - | 957 | WP_003416627.1 | epoxide hydrolase MesT | - |
| LVJ75_RS16760 (LVJ75_16745) | 3542054..3542914 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| LVJ75_RS16765 (LVJ75_16750) | 3542889..3543404 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| LVJ75_RS16770 (LVJ75_16755) | 3543420..3543631 | + | 212 | Protein_3311 | (R)-hydratase | - |
| LVJ75_RS16775 (LVJ75_16760) | 3543644..3543937 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| LVJ75_RS16780 (LVJ75_16765) | 3544003..3545263 | + | 1261 | Protein_3313 | IS3 family transposase IS987 | Transposase |
| LVJ75_RS16785 (LVJ75_16770) | 3545582..3546871 | + | 1290 | WP_003416640.1 | ATP-binding protein | - |
| LVJ75_RS16795 (LVJ75_16780) | 3548576..3549010 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| LVJ75_RS16800 (LVJ75_16785) | 3549013..3549465 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| LVJ75_RS16805 (LVJ75_16790) | 3549696..3550040 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LVJ75_RS16810 (LVJ75_16795) | 3550037..3550366 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| LVJ75_RS16815 (LVJ75_16800) | 3550904..3551251 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| LVJ75_RS16820 (LVJ75_16805) | 3551248..3551868 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| LVJ75_RS16825 (LVJ75_16810) | 3552028..3553293 | - | 1266 | WP_003902423.1 | hypothetical protein | - |
| LVJ75_RS16830 (LVJ75_16815) | 3553461..3553670 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| LVJ75_RS16835 (LVJ75_16820) | 3553917..3554951 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| LVJ75_RS16840 (LVJ75_16825) | 3555235..3555459 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| LVJ75_RS16850 (LVJ75_16835) | 3556166..3556630 | + | 465 | WP_003913440.1 | LLM class flavin-dependent oxidoreductase | - |
| LVJ75_RS16855 (LVJ75_16840) | 3556800..3559778 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| LVJ75_RS16860 (LVJ75_16845) | 3559870..3560892 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| LVJ75_RS16865 (LVJ75_16850) | 3560970..3562388 | + | 1419 | WP_003416804.1 | zinc-dependent metalloprotease | - |
| LVJ75_RS16870 (LVJ75_16855) | 3562427..3563293 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| LVJ75_RS16875 (LVJ75_16860) | 3563302..3563475 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| LVJ75_RS16880 (LVJ75_16865) | 3563630..3564973 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| LVJ75_RS16885 (LVJ75_16870) | 3565007..3565285 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| LVJ75_RS16890 (LVJ75_16875) | 3565715..3567817 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| LVJ75_RS16895 (LVJ75_16880) | 3567941..3568195 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| LVJ75_RS16900 (LVJ75_16885) | 3568208..3569149 | - | 942 | WP_003906027.1 | NAD(+) diphosphatase | - |
| LVJ75_RS16905 (LVJ75_16890) | 3569208..3570275 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| LVJ75_RS16910 (LVJ75_16895) | 3570337..3573642 | - | 3306 | WP_003910809.1 | ATP-dependent DNA helicase AdnB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0.008 |