MGE detailed information
MGE type: Prophage MGE length: 8910 bp
Accession: NZ_CP089779 Location: 1283373..1292282 Organism: Mycobacterium tuberculosis strain 01-R1134 Replicon: chromosome
Accession: NZ_CP089779 Location: 1283373..1292282 Organism: Mycobacterium tuberculosis strain 01-R1134 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ74_RS05930 (LVJ74_05920) | 1278440..1278910 | - | 471 | WP_003413852.1 | N-acetyltransferase | - |
| LVJ74_RS05935 (LVJ74_05925) | 1278939..1279460 | - | 522 | WP_003899425.1 | hypothetical protein | - |
| LVJ74_RS05940 (LVJ74_05930) | 1279539..1280297 | - | 759 | WP_003413845.1 | Clp protease N-terminal domain-containing protein | - |
| LVJ74_RS05945 (LVJ74_05935) | 1280340..1281120 | - | 781 | Protein_1175 | IS256-like element IS1081 family transposase | - |
| LVJ74_RS05950 (LVJ74_05940) | 1281211..1281492 | - | 282 | WP_003899423.1 | hypothetical protein | - |
| LVJ74_RS05955 (LVJ74_05945) | 1281840..1282094 | - | 255 | WP_031658939.1 | hypothetical protein | - |
| LVJ74_RS05960 (LVJ74_05950) | 1282105..1282338 | - | 234 | WP_003413717.1 | hypothetical protein | - |
| LVJ74_RS05965 (LVJ74_05955) | 1282437..1282709 | - | 273 | WP_003900544.1 | hypothetical protein | - |
| LVJ74_RS05970 (LVJ74_05960) | 1282615..1283004 | + | 390 | WP_003899422.1 | hypothetical protein | - |
| LVJ74_RS05975 (LVJ74_05965) | 1283001..1283228 | + | 228 | WP_003899421.1 | hypothetical protein | - |
| LVJ74_RS05980 (LVJ74_05970) | 1283373..1284500 | + | 1128 | WP_003899420.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| LVJ74_RS05985 (LVJ74_05975) | 1284503..1284865 | + | 363 | WP_003900543.1 | hypothetical protein | - |
| LVJ74_RS05990 (LVJ74_05980) | 1284882..1285142 | + | 261 | WP_003899418.1 | helix-turn-helix domain-containing protein | - |
| LVJ74_RS05995 (LVJ74_05985) | 1285139..1285531 | + | 393 | WP_003899417.1 | DUF2742 domain-containing protein | - |
| LVJ74_RS06000 (LVJ74_05990) | 1285533..1286960 | + | 1428 | WP_003899416.1 | DUF3631 domain-containing protein | - |
| LVJ74_RS06005 (LVJ74_05995) | 1286957..1287202 | + | 246 | WP_003899415.1 | type II toxin-antitoxin system antitoxin | Antitoxin Detail |
| LVJ74_RS06010 (LVJ74_06000) | 1287282..1287605 | + | 324 | WP_003899414.1 | type II toxin-antitoxin system toxin | Toxin Detail |
| LVJ74_RS06015 (LVJ74_06005) | 1287772..1288263 | + | 492 | WP_003900541.1 | phage terminase small subunit P27 family | - |
| LVJ74_RS06020 (LVJ74_06010) | 1288416..1288949 | + | 534 | WP_003899412.1 | HK97 family phage prohead protease | - |
| LVJ74_RS06025 (LVJ74_06015) | 1288957..1290396 | + | 1440 | WP_003899411.1 | phage major capsid protein | - |
| LVJ74_RS06030 (LVJ74_06020) | 1290567..1290818 | - | 252 | WP_003908028.1 | hypothetical protein | - |
| LVJ74_RS06035 (LVJ74_06025) | 1290806..1291270 | - | 465 | WP_003900539.1 | ParB N-terminal domain-containing protein | - |
| LVJ74_RS06040 (LVJ74_06030) | 1291284..1292282 | - | 999 | WP_003900538.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LVJ74_RS06045 (LVJ74_06035) | 1292279..1292710 | - | 432 | WP_003899409.1 | hypothetical protein | - |
| LVJ74_RS06070 (LVJ74_06060) | 1293678..1293999 | - | 322 | Protein_1196 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LVJ74_RS06075 (LVJ74_06065) | 1294001..1294192 | - | 192 | WP_003912823.1 | antitoxin MazE family protein | - |
| LVJ74_RS06080 (LVJ74_06070) | 1294427..1295923 | - | 1497 | WP_003413686.1 | ACR3 family arsenite efflux transporter | - |
| LVJ74_RS06085 (LVJ74_06075) | 1295920..1296300 | - | 381 | WP_003899407.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LVJ74_RS06090 (LVJ74_06080) | 1296436..1296894 | - | 459 | WP_003413675.1 | cadmium-induced metalloenzyme CadI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA120 | NC_000962 | 2970551..2980818 | 0.003 |