MGE detailed information
MGE type: Prophage MGE length: 8910 bp
Accession: NZ_CP089611 Location: 2957790..2966699 Organism: Mycobacterium tuberculosis strain I0004240-3 Replicon: chromosome
Accession: NZ_CP089611 Location: 2957790..2966699 Organism: Mycobacterium tuberculosis strain I0004240-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ90_RS13885 (LVJ90_13885) | 2953178..2953636 | + | 459 | WP_003413675.1 | cadmium-induced metalloenzyme CadI | - |
| LVJ90_RS13890 (LVJ90_13890) | 2953772..2954152 | + | 381 | WP_003899407.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LVJ90_RS13895 (LVJ90_13895) | 2954149..2955645 | + | 1497 | WP_003413686.1 | ACR3 family arsenite efflux transporter | - |
| LVJ90_RS13900 (LVJ90_13900) | 2955880..2956071 | + | 192 | WP_003912823.1 | antitoxin MazE family protein | - |
| LVJ90_RS13905 (LVJ90_13905) | 2956073..2956394 | + | 322 | Protein_2746 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LVJ90_RS13930 (LVJ90_13930) | 2957362..2957793 | + | 432 | WP_003899409.1 | hypothetical protein | - |
| LVJ90_RS13935 (LVJ90_13935) | 2957790..2958788 | + | 999 | WP_003900538.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LVJ90_RS13940 (LVJ90_13940) | 2958802..2959266 | + | 465 | WP_003900539.1 | ParB N-terminal domain-containing protein | - |
| LVJ90_RS13945 (LVJ90_13945) | 2959254..2959505 | + | 252 | WP_003908028.1 | hypothetical protein | - |
| LVJ90_RS13950 (LVJ90_13950) | 2959676..2961115 | - | 1440 | WP_003899411.1 | phage major capsid protein | - |
| LVJ90_RS13955 (LVJ90_13955) | 2961123..2961656 | - | 534 | WP_003899412.1 | HK97 family phage prohead protease | - |
| LVJ90_RS13960 (LVJ90_13960) | 2961809..2962300 | - | 492 | WP_003900541.1 | phage terminase small subunit P27 family | - |
| LVJ90_RS13965 (LVJ90_13965) | 2962467..2962790 | - | 324 | WP_003899414.1 | type II toxin-antitoxin system toxin | Toxin Detail |
| LVJ90_RS13970 (LVJ90_13970) | 2962870..2963115 | - | 246 | WP_003899415.1 | type II toxin-antitoxin system antitoxin | Antitoxin Detail |
| LVJ90_RS13975 (LVJ90_13975) | 2963112..2964539 | - | 1428 | WP_003899416.1 | DUF3631 domain-containing protein | - |
| LVJ90_RS13980 (LVJ90_13980) | 2964541..2964933 | - | 393 | WP_003899417.1 | DUF2742 domain-containing protein | - |
| LVJ90_RS13985 (LVJ90_13985) | 2964930..2965190 | - | 261 | WP_003899418.1 | helix-turn-helix domain-containing protein | - |
| LVJ90_RS13990 (LVJ90_13990) | 2965207..2965569 | - | 363 | WP_003900543.1 | hypothetical protein | - |
| LVJ90_RS13995 (LVJ90_13995) | 2965572..2966699 | - | 1128 | WP_003899420.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| LVJ90_RS14000 (LVJ90_14000) | 2966844..2967071 | - | 228 | WP_003899421.1 | hypothetical protein | - |
| LVJ90_RS14005 (LVJ90_14005) | 2967068..2967457 | - | 390 | WP_003899422.1 | hypothetical protein | - |
| LVJ90_RS14010 (LVJ90_14010) | 2967363..2967635 | + | 273 | WP_003900544.1 | hypothetical protein | - |
| LVJ90_RS14015 (LVJ90_14015) | 2967734..2967967 | + | 234 | WP_003413717.1 | hypothetical protein | - |
| LVJ90_RS14020 (LVJ90_14020) | 2967978..2968232 | + | 255 | WP_003413719.1 | hypothetical protein | - |
| LVJ90_RS14025 (LVJ90_14025) | 2968580..2968862 | + | 283 | Protein_2766 | arginine RICH protein | - |
| LVJ90_RS14030 (LVJ90_14030) | 2968953..2969735 | + | 783 | Protein_2767 | IS256-like element IS1081 family transposase | - |
| LVJ90_RS14035 (LVJ90_14035) | 2969778..2970536 | + | 759 | WP_003413845.1 | Clp protease N-terminal domain-containing protein | - |
| LVJ90_RS14040 (LVJ90_14040) | 2970615..2971136 | + | 522 | WP_003899425.1 | hypothetical protein | - |
| LVJ90_RS14045 (LVJ90_14045) | 2971165..2971635 | + | 471 | WP_003413852.1 | N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA120 | NC_000962 | 2970551..2980818 | 0.003 |