MGE detailed information
MGE type: IS/Tn MGE length: 1395 bp
Accession: NZ_CP089309 Location: 1232659..1234053 Organism: Thiocapsa bogorovii strain BBS Replicon: chromosome
Accession: NZ_CP089309 Location: 1232659..1234053 Organism: Thiocapsa bogorovii strain BBS Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT988_RS05520 (LT988_05520) | 1228111..1228485 | - | 375 | WP_232409226.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LT988_RS05525 (LT988_05525) | 1228482..1228682 | - | 201 | WP_232409227.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LT988_RS05530 (LT988_05530) | 1228847..1229026 | - | 180 | WP_232409228.1 | hypothetical protein | - |
| LT988_RS05535 (LT988_05535) | 1229023..1229349 | - | 327 | WP_232409229.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LT988_RS05540 (LT988_05540) | 1229346..1229570 | - | 225 | WP_232409230.1 | antitoxin MazE family protein | Antitoxin Detail |
| LT988_RS05545 (LT988_05545) | 1229820..1232549 | - | 2730 | WP_232409231.1 | BREX system P-loop protein BrxC | - |
| LT988_RS05550 (LT988_05550) | 1232659..1234053 | + | 1395 | WP_232406659.1 | IS1380 family transposase ISTro1 | Transposase |
| LT988_RS05555 (LT988_05555) | 1234280..1235017 | - | 738 | WP_232409232.1 | hypothetical protein | - |
| LT988_RS05560 (LT988_05560) | 1235033..1235581 | - | 549 | WP_232409233.1 | DUF1788 domain-containing protein | - |
| LT988_RS05565 (LT988_05565) | 1235568..1236362 | - | 795 | WP_232409234.1 | hypothetical protein | - |
| LT988_RS05570 (LT988_05570) | 1236350..1236673 | - | 324 | WP_232409235.1 | hypothetical protein | - |
| LT988_RS05575 (LT988_05575) | 1237248..1237727 | - | 480 | WP_232409236.1 | antitoxin | - |
| LT988_RS05580 (LT988_05580) | 1237717..1238124 | - | 408 | WP_232409237.1 | nucleotidyltransferase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|