MGE detailed information
MGE type: Prophage MGE length: 107369 bp
Accession: NZ_CP089270 Location: 2527838..2635206 Organism: Escherichia coli O157:H7 strain M1300706002 Replicon: chromosome
Accession: NZ_CP089270 Location: 2527838..2635206 Organism: Escherichia coli O157:H7 strain M1300706002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSI72_RS12660 (2523738) | 2523738..2524958 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| LSI72_RS12665 (2525083) | 2525083..2525778 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| LSI72_RS12670 (2525731) | 2525731..2527023 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| LSI72_RS12675 (2527181) | 2527181..2527795 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| LSI72_RS12680 (2527838) | 2527838..2528692 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| LSI72_RS12685 (2528694) | 2528694..2529311 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| LSI72_RS12690 (2529322) | 2529322..2531745 | - | 2424 | WP_001414236.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| LSI72_RS12695 (2531806) | 2531806..2534232 | - | 2427 | WP_000041704.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| LSI72_RS12700 (2534431) | 2534431..2534736 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| LSI72_RS12705 (2534844) | 2534844..2535554 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| LSI72_RS12710 (2535557) | 2535557..2536117 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| LSI72_RS12715 (2536152) | 2536152..2536493 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| LSI72_RS12720 (2536628) | 2536628..2536954 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| LSI72_RS12725 (2537160) | 2537160..2537246 | + | 87 | Protein_2494 | hypothetical protein | - |
| LSI72_RS12730 (2537226) | 2537226..2537908 | - | 683 | Protein_2495 | DUF3596 domain-containing protein | - |
| LSI72_RS12735 (2537943) | 2537943..2538194 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| LSI72_RS12740 (2538267) | 2538267..2540738 | - | 2472 | WP_000048458.1 | exonuclease | - |
| LSI72_RS12745 (2540831) | 2540831..2541022 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| LSI72_RS12750 (2541019) | 2541019..2541207 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| LSI72_RS12755 (2541776) | 2541776..2541994 | - | 219 | WP_001171930.1 | protein YdfC | - |
| LSI72_RS12760 (2542066) | 2542066..2542365 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| LSI72_RS12765 (2542718) | 2542718..2542996 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LSI72_RS12770 (2542998) | 2542998..2543189 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| LSI72_RS12775 (2543210) | 2543210..2543581 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| LSI72_RS12780 (2543679) | 2543679..2543981 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| LSI72_RS12785 (2543978) | 2543978..2544403 | + | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| LSI72_RS12790 (2544426) | 2544426..2545388 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| LSI72_RS12795 (2545395) | 2545395..2546135 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| LSI72_RS12800 (2546161) | 2546161..2546930 | + | 770 | Protein_2509 | DUF1627 domain-containing protein | - |
| LSI72_RS12805 (2546946) | 2546946..2547341 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| LSI72_RS12810 (2547398) | 2547398..2547982 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| LSI72_RS12815 (2548098) | 2548098..2548202 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| LSI72_RS12820 (2548448) | 2548448..2548603 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| LSI72_RS12825 (2548771) | 2548771..2549049 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| LSI72_RS12830 (2549051) | 2549051..2550100 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| LSI72_RS12835 (2550113) | 2550113..2550472 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LSI72_RS12840 (2550469) | 2550469..2551158 | + | 690 | WP_001059381.1 | bacteriophage antitermination protein Q | - |
| LSI72_RS12860 (2551798) | 2551798..2552226 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| LSI72_RS12865 (2552223) | 2552223..2552390 | + | 168 | WP_000216653.1 | DUF3927 family protein | - |
| LSI72_RS12870 (2552585) | 2552585..2552728 | - | 144 | Protein_2520 | hypothetical protein | - |
| LSI72_RS12875 (2552705) | 2552705..2554555 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| LSI72_RS12880 (2554995) | 2554995..2555210 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| LSI72_RS12885 (2555215) | 2555215..2555559 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| LSI72_RS12890 (2555610) | 2555610..2556143 | + | 534 | WP_000992137.1 | lysozyme | - |
| LSI72_RS12895 (2556414) | 2556414..2556983 | + | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| LSI72_RS12900 (2556983) | 2556983..2557129 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| LSI72_RS12905 (2557357) | 2557357..2557542 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| LSI72_RS12910 (2557967) | 2557967..2558194 | - | 228 | WP_000095736.1 | YlcI/YnfO family protein | - |
| LSI72_RS12915 (2558236) | 2558236..2558601 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| LSI72_RS12920 (2558891) | 2558891..2559454 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| LSI72_RS12925 (2559451) | 2559451..2561112 | + | 1662 | WP_001304106.1 | terminase large subunit | - |
| LSI72_RS12930 (2561176) | 2561176..2563113 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| LSI72_RS12935 (2563158) | 2563158..2563379 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| LSI72_RS12940 (2563325) | 2563325..2565904 | + | 2580 | WP_001304108.1 | phage portal protein | - |
| LSI72_RS12945 (2565907) | 2565907..2566233 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| LSI72_RS12950 (2566243) | 2566243..2566593 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| LSI72_RS12955 (2566590) | 2566590..2567036 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| LSI72_RS12960 (2567033) | 2567033..2567377 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| LSI72_RS12965 (2567443) | 2567443..2568159 | + | 717 | WP_001275434.1 | major tail subunit | - |
| LSI72_RS12970 (2568174) | 2568174..2568548 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| LSI72_RS12975 (2568644) | 2568644..2568853 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| LSI72_RS12980 (2568901) | 2568901..2572143 | + | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| LSI72_RS12985 (2572136) | 2572136..2572477 | + | 342 | WP_000807954.1 | phage tail protein | - |
| LSI72_RS12990 (2572477) | 2572477..2573175 | + | 699 | WP_001179481.1 | phage minor tail protein L | - |
| LSI72_RS12995 (2573186) | 2573186..2573929 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| LSI72_RS13000 (2573926) | 2573926..2574507 | + | 582 | WP_001089999.1 | tail assembly protein | - |
| LSI72_RS13005 (2574849) | 2574849..2578323 | + | 3475 | Protein_2547 | host specificity protein J | - |
| LSI72_RS13010 (2578391) | 2578391..2578990 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| LSI72_RS13015 (2579055) | 2579055..2580278 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| LSI72_RS13020 (2580280) | 2580280..2580549 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| LSI72_RS13025 (2580708) | 2580708..2581238 | + | 531 | WP_044386033.1 | hypothetical protein | VF |
| LSI72_RS13030 (2581949) | 2581949..2582599 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| LSI72_RS13035 (2582749) | 2582749..2583144 | + | 396 | Protein_2553 | IS256 family transposase ISEic2 | Transposase |
| LSI72_RS13040 (2583182) | 2583182..2584720 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| LSI72_RS13045 (2584770) | 2584770..2585117 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| LSI72_RS13050 (2585114) | 2585114..2585494 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| LSI72_RS13055 (2585589) | 2585589..2586407 | + | 819 | Protein_2557 | IS256 family transposase IS1414 | Transposase |
| LSI72_RS13060 (2586457) | 2586457..2586699 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| LSI72_RS13065 (2586877) | 2586877..2587428 | - | 552 | Protein_2559 | Putative defective protein IntQ ; Integrase | Integrase |
| LSI72_RS13070 (2587416) | 2587416..2588654 | - | 1239 | Protein_2560 | exonuclease | - |
| LSI72_RS13075 (2588747) | 2588747..2588935 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| LSI72_RS13080 (2588932) | 2588932..2589120 | - | 189 | WP_000449175.1 | cell division inhibition protein DicB | - |
| LSI72_RS13085 (2589685) | 2589685..2589894 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| LSI72_RS13090 (2589895) | 2589895..2590533 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| LSI72_RS13095 (2590545) | 2590545..2590697 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| LSI72_RS13100 (2590990) | 2590990..2591328 | - | 339 | WP_001416688.1 | S24 family peptidase | - |
| LSI72_RS13105 (2591720) | 2591720..2591962 | + | 243 | WP_000747948.1 | Cro/CI family transcriptional regulator | - |
| LSI72_RS13110 (2591946) | 2591946..2592371 | + | 426 | WP_000693878.1 | toxin YdaT family protein | - |
| LSI72_RS13115 (2592440) | 2592440..2593483 | + | 1044 | WP_001262402.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| LSI72_RS13120 (2593476) | 2593476..2593937 | + | 462 | WP_000139447.1 | replication protein P | - |
| LSI72_RS13125 (2593971) | 2593971..2594687 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| LSI72_RS13130 (2594720) | 2594720..2595001 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| LSI72_RS13135 (2594998) | 2594998..2595225 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| LSI72_RS13140 (2595218) | 2595218..2595529 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| LSI72_RS13150 (2596970) | 2596970..2597188 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| LSI72_RS13155 (2597190) | 2597190..2597747 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| LSI72_RS13160 (2598038) | 2598038..2598193 | + | 156 | WP_000813258.1 | Hok/Gef family protein | - |
| LSI72_RS13165 (2598313) | 2598313..2598657 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| LSI72_RS13170 (2598779) | 2598779..2599051 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| LSI72_RS13175 (2599053) | 2599053..2600102 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| LSI72_RS13180 (2600115) | 2600115..2600420 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LSI72_RS13185 (2600483) | 2600483..2601037 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| LSI72_RS13190 (2601262) | 2601262..2601459 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| LSI72_RS13195 (2601595) | 2601595..2602308 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| LSI72_RS13210 (2602759) | 2602759..2603190 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| LSI72_RS13215 (2603187) | 2603187..2603354 | + | 168 | WP_000216636.1 | DUF3927 family protein | - |
| LSI72_RS13220 (2603549) | 2603549..2603691 | - | 143 | Protein_2588 | hypothetical protein | - |
| LSI72_RS13225 (2603668) | 2603668..2605518 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| LSI72_RS13230 (2605957) | 2605957..2606172 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| LSI72_RS13235 (2606177) | 2606177..2606521 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| LSI72_RS13240 (2606572) | 2606572..2607105 | + | 534 | WP_000992137.1 | lysozyme | - |
| LSI72_RS13245 (2607376) | 2607376..2607945 | + | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| LSI72_RS13250 (2607945) | 2607945..2608091 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| LSI72_RS13255 (2608314) | 2608314..2608499 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| LSI72_RS13260 (2609025) | 2609025..2609339 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| LSI72_RS13265 (2609421) | 2609421..2609645 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| LSI72_RS13270 (2610032) | 2610032..2610577 | + | 546 | WP_000867493.1 | terminase small subunit | - |
| LSI72_RS13275 (2610552) | 2610552..2612477 | + | 1926 | WP_001027223.1 | phage terminase large subunit family protein | - |
| LSI72_RS13280 (2612474) | 2612474..2612680 | + | 207 | WP_000198153.1 | gpW family protein | - |
| LSI72_RS13285 (2612677) | 2612677..2614278 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| LSI72_RS13290 (2614259) | 2614259..2615578 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| LSI72_RS13295 (2615588) | 2615588..2615920 | + | 333 | WP_001295978.1 | head decoration protein | - |
| LSI72_RS13300 (2615976) | 2615976..2617001 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| LSI72_RS13305 (2617043) | 2617043..2617441 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| LSI72_RS13310 (2617453) | 2617453..2617806 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| LSI72_RS13315 (2617821) | 2617821..2618354 | + | 534 | WP_000975020.1 | phage tail protein | - |
| LSI72_RS13320 (2618351) | 2618351..2618746 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| LSI72_RS13325 (2618754) | 2618754..2619506 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| LSI72_RS13330 (2619520) | 2619520..2619942 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| LSI72_RS13335 (2619969) | 2619969..2620382 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| LSI72_RS13340 (2620363) | 2620363..2622975 | + | 2613 | WP_000081803.1 | phage tail tape measure protein | - |
| LSI72_RS13345 (2622972) | 2622972..2623301 | + | 330 | WP_000847298.1 | phage tail protein | - |
| LSI72_RS13350 (2623301) | 2623301..2623999 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| LSI72_RS13355 (2624010) | 2624010..2624753 | + | 744 | WP_000194798.1 | C40 family peptidase | - |
| LSI72_RS13360 (2624750) | 2624750..2625328 | + | 579 | WP_001302798.1 | tail assembly protein | - |
| LSI72_RS13365 (2625569) | 2625569..2629047 | + | 3479 | Protein_2617 | host specificity protein J | - |
| LSI72_RS13370 (2629115) | 2629115..2629714 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| LSI72_RS13375 (2629779) | 2629779..2631002 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| LSI72_RS13380 (2631004) | 2631004..2631273 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| LSI72_RS13385 (2631387) | 2631387..2631962 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| LSI72_RS13390 (2632035) | 2632035..2632664 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| LSI72_RS13395 (2632746) | 2632746..2633387 | + | 642 | WP_001143808.1 | hypothetical protein | VF |
| LSI72_RS13400 (2633549) | 2633549..2633791 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| LSI72_RS13405 (2633923) | 2633923..2635206 | + | 1284 | Protein_2625 | MHS family MFS transporter YdfJ | - |
| LSI72_RS13410 (2635295) | 2635295..2636755 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| LSI72_RS13415 (2636791) | 2636791..2636994 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| LSI72_RS13420 (2637171) | 2637171..2637857 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| LSI72_RS13425 (2637946) | 2637946..2638692 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA1008 | NC_002695 | 2157035..2254487 | 0.003 |