MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92438 bp
Accession: NZ_CP089033 Location: 1..92438 Organism: Escherichia coli O157:H7 strain 6535WT Replicon: plasmid pO157
Accession: NZ_CP089033 Location: 1..92438 Organism: Escherichia coli O157:H7 strain 6535WT Replicon: plasmid pO157
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSI69_RS28425 (1) | 1..858 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| LSI69_RS28430 (1769) | 1769..2053 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LSI69_RS28435 (2053) | 2053..2328 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LSI69_RS28440 (2423) | 2423..2629 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| LSI69_RS28445 (2729) | 2729..2944 | - | 216 | Protein_5 | transposase | - |
| LSI69_RS28450 (2988) | 2988..3554 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| LSI69_RS28455 (3554) | 3554..3970 | - | 417 | Protein_7 | IS91 family transposase | - |
| LSI69_RS28460 (3970) | 3970..4155 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| LSI69_RS28465 (4332) | 4332..6542 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| LSI69_RS28470 (6586) | 6586..6975 | + | 390 | WP_001172748.1 | cytochrome b562 | - |
| LSI69_RS28475 (7032) | 7032..8020 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| LSI69_RS28480 (8201) | 8201..12103 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| LSI69_RS28485 (12359) | 12359..12840 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| LSI69_RS28490 (14282) | 14282..15103 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| LSI69_RS28495 (15103) | 15103..16209 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| LSI69_RS28500 (16299) | 16299..18020 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| LSI69_RS28505 (18094) | 18094..19092 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| LSI69_RS28510 (19145) | 19145..19333 | + | 189 | Protein_18 | hypothetical protein | - |
| LSI69_RS28515 (19437) | 19437..19523 | - | 87 | Protein_19 | IS3 family transposase ISEhe3 | Transposase |
| LSI69_RS28520 (20003) | 20003..22699 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| LSI69_RS28525 (22786) | 22786..23661 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| LSI69_RS28530 (23662) | 23662..25629 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| LSI69_RS28535 (25629) | 25629..27134 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| LSI69_RS28540 (27136) | 27136..28359 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| LSI69_RS28545 (28390) | 28390..28824 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| LSI69_RS28550 (28821) | 28821..29375 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| LSI69_RS28555 (29390) | 29390..29737 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| LSI69_RS28560 (29734) | 29734..30333 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| LSI69_RS28565 (30330) | 30330..31307 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| LSI69_RS28570 (31241) | 31241..32518 | + | 1278 | WP_011321724.1 | Type II secretion system protein L | VF |
| LSI69_RS28575 (32505) | 32505..33017 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| LSI69_RS28580 (33192) | 33192..33908 | + | 717 | WP_001358889.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| LSI69_RS28585 (34000) | 34000..34401 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| LSI69_RS28590 (34580) | 34580..35751 | + | 1172 | WP_085949322.1 | IS3 family transposase ISLad1 | Transposase |
| LSI69_RS28595 (36292) | 36292..36807 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| LSI69_RS28600 (36809) | 36809..39805 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| LSI69_RS28605 (39855) | 39855..41975 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| LSI69_RS28610 (41979) | 41979..43418 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| LSI69_RS28615 (43485) | 43485..43679 | + | 195 | WP_001303402.1 | hypothetical protein | VF |
| LSI69_RS28620 (43709) | 43709..43993 | + | 285 | WP_001358890.1 | Transcriptional repressor MprA | VF |
| LSI69_RS28625 (44162) | 44162..44392 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| LSI69_RS28630 (44513) | 44513..45253 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| LSI69_RS28635 (45538) | 45538..46515 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| LSI69_RS28640 (46923) | 46923..47123 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| LSI69_RS28645 (47120) | 47120..47740 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| LSI69_RS28650 (47737) | 47737..48420 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| LSI69_RS28655 (48879) | 48879..49097 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LSI69_RS28660 (49099) | 49099..49404 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LSI69_RS28665 (49405) | 49405..50211 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| LSI69_RS28675 (51866) | 51866..52126 | + | 261 | WP_071526583.1 | RepB family plasmid replication initiator protein | - |
| LSI69_RS28680 (52714) | 52714..53880 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| LSI69_RS28685 (53880) | 53880..54851 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LSI69_RS28690 (56151) | 56151..57875 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| LSI69_RS28695 (57952) | 57952..58854 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| LSI69_RS28700 (58858) | 58858..59163 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| LSI69_RS28705 (59240) | 59240..59923 | + | 684 | WP_000085945.1 | DNA methylase | - |
| LSI69_RS28710 (59924) | 59924..60145 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| LSI69_RS28715 (60039) | 60039..60594 | + | 556 | Protein_59 | DUF1380 family protein | - |
| LSI69_RS28720 (60640) | 60640..61417 | + | 778 | Protein_60 | hypothetical protein | - |
| LSI69_RS28725 (61832) | 61832..62258 | + | 427 | Protein_61 | antirestriction protein | - |
| LSI69_RS28730 (62305) | 62305..62727 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| LSI69_RS28735 (62724) | 62724..62915 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| LSI69_RS28740 (63911) | 63911..64141 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| LSI69_RS28745 (64193) | 64193..65554 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| LSI69_RS28750 (65601) | 65601..66164 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| LSI69_RS28755 (66250) | 66250..66711 | - | 462 | WP_001304227.1 | hypothetical protein | - |
| LSI69_RS28760 (66781) | 66781..66987 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| LSI69_RS28765 (67013) | 67013..67465 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| LSI69_RS28770 (67522) | 67522..67755 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| LSI69_RS28775 (67821) | 67821..69779 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| LSI69_RS28780 (69834) | 69834..70268 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| LSI69_RS28785 (70265) | 70265..71026 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - (70995) | 70995..71193 | + | 199 | NuclAT_0 | - | - |
| - (70995) | 70995..71193 | + | 199 | NuclAT_0 | - | - |
| - (70995) | 70995..71193 | + | 199 | NuclAT_0 | - | - |
| - (70995) | 70995..71193 | + | 199 | NuclAT_0 | - | - |
| LSI69_RS28790 (71200) | 71200..71349 | + | 150 | Protein_74 | DUF5431 family protein | - |
| LSI69_RS28795 (71291) | 71291..71416 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| LSI69_RS28800 (71550) | 71550..73571 | + | 2022 | Protein_76 | hypothetical protein | Relaxase |
| LSI69_RS28805 (73639) | 73639..74070 | + | 432 | WP_001453090.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| LSI69_RS28810 (74742) | 74742..75091 | - | 350 | Protein_78 | IS3 family transposase IS3H | Transposase |
| LSI69_RS28815 (75185) | 75185..75448 | + | 264 | Protein_79 | IS21 family transposase ISEc62 | Transposase |
| LSI69_RS28820 (75488) | 75488..75608 | + | 121 | Protein_80 | IS21 family transposase ISEc62 | Transposase |
| LSI69_RS28825 (75605) | 75605..75757 | + | 153 | Protein_81 | IS1 family transposase | - |
| LSI69_RS28830 (75864) | 75864..85373 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| LSI69_RS28835 (85447) | 85447..85671 | + | 225 | Protein_83 | IS3 family transposase IS3H | Transposase |
| LSI69_RS28840 (85664) | 85664..85909 | - | 246 | Protein_84 | IS3 family transposase IS1203 | Transposase |
| LSI69_RS28845 (85916) | 85916..86167 | - | 252 | Protein_85 | IS3 family transposase IS1203 | Transposase |
| LSI69_RS28850 (86224) | 86224..87612 | + | 1389 | Protein_86 | Multifunctional conjugation protein TraI | Relaxase |
| LSI69_RS28855 (87632) | 87632..88378 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| LSI69_RS28860 (88437) | 88437..89297 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| LSI69_RS28865 (89400) | 89400..89960 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| LSI69_RS28870 (90093) | 90093..90305 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| LSI69_RS28875 (90550) | 90550..91011 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| LSI69_RS28880 (91057) | 91057..91266 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| LSI69_RS28885 (91304) | 91304..91642 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| LSI69_RS28890 (91882) | 91882..92136 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|