MGE detailed information
MGE type: Prophage MGE length: 100776 bp
Accession: NZ_CP089032 Location: 2558239..2659014 Organism: Escherichia coli O157:H7 strain 6535WT Replicon: chromosome
Accession: NZ_CP089032 Location: 2558239..2659014 Organism: Escherichia coli O157:H7 strain 6535WT Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSI69_RS12825 (2555614) | 2555614..2558040 | - | 2427 | WP_000041704.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| LSI69_RS12830 (2558239) | 2558239..2558544 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| LSI69_RS12835 (2558652) | 2558652..2559362 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| LSI69_RS12840 (2559365) | 2559365..2559925 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| LSI69_RS12845 (2559960) | 2559960..2560301 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| LSI69_RS12850 (2560436) | 2560436..2560762 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| LSI69_RS12855 (2560968) | 2560968..2561054 | + | 87 | Protein_2526 | hypothetical protein | - |
| LSI69_RS12860 (2561034) | 2561034..2561716 | - | 683 | Protein_2527 | DUF3596 domain-containing protein | - |
| LSI69_RS12865 (2561751) | 2561751..2562002 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| LSI69_RS12870 (2562075) | 2562075..2564546 | - | 2472 | WP_000048458.1 | exonuclease | - |
| LSI69_RS12875 (2564639) | 2564639..2564830 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| LSI69_RS12880 (2564827) | 2564827..2565015 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| LSI69_RS12885 (2565584) | 2565584..2565802 | - | 219 | WP_001171930.1 | protein YdfC | - |
| LSI69_RS12890 (2565874) | 2565874..2566173 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| LSI69_RS12895 (2566526) | 2566526..2566804 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LSI69_RS12900 (2566806) | 2566806..2566997 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| LSI69_RS12905 (2567018) | 2567018..2567389 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| LSI69_RS12910 (2567487) | 2567487..2567789 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| LSI69_RS12915 (2567786) | 2567786..2568211 | + | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| LSI69_RS12920 (2568234) | 2568234..2569196 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| LSI69_RS12925 (2569203) | 2569203..2569943 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| LSI69_RS12930 (2569969) | 2569969..2570738 | + | 770 | Protein_2541 | DUF1627 domain-containing protein | - |
| LSI69_RS12935 (2570754) | 2570754..2571149 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| LSI69_RS12940 (2571206) | 2571206..2571790 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| LSI69_RS12945 (2571906) | 2571906..2572010 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| LSI69_RS12950 (2572256) | 2572256..2572411 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| LSI69_RS12955 (2572579) | 2572579..2572857 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| LSI69_RS12960 (2572859) | 2572859..2573908 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| LSI69_RS12965 (2573921) | 2573921..2574280 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LSI69_RS12970 (2574277) | 2574277..2574966 | + | 690 | WP_001059381.1 | bacteriophage antitermination protein Q | - |
| LSI69_RS12990 (2575606) | 2575606..2576034 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| LSI69_RS12995 (2576031) | 2576031..2576198 | + | 168 | WP_000216653.1 | DUF3927 family protein | - |
| LSI69_RS13000 (2576393) | 2576393..2576536 | - | 144 | Protein_2552 | hypothetical protein | - |
| LSI69_RS13005 (2576513) | 2576513..2578363 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| LSI69_RS13010 (2578803) | 2578803..2579018 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| LSI69_RS13015 (2579023) | 2579023..2579367 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| LSI69_RS13020 (2579418) | 2579418..2579951 | + | 534 | WP_000992137.1 | lysozyme | - |
| LSI69_RS13025 (2580222) | 2580222..2580791 | + | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| LSI69_RS13030 (2580791) | 2580791..2580937 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| LSI69_RS13035 (2581165) | 2581165..2581350 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| LSI69_RS13040 (2581775) | 2581775..2582002 | - | 228 | WP_000095736.1 | YlcI/YnfO family protein | - |
| LSI69_RS13045 (2582044) | 2582044..2582409 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| LSI69_RS13050 (2582699) | 2582699..2583262 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| LSI69_RS13055 (2583259) | 2583259..2584920 | + | 1662 | WP_001304106.1 | terminase large subunit | - |
| LSI69_RS13060 (2584984) | 2584984..2586921 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| LSI69_RS13065 (2586966) | 2586966..2587187 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| LSI69_RS13070 (2587133) | 2587133..2589712 | + | 2580 | WP_001304108.1 | phage portal protein | - |
| LSI69_RS13075 (2589715) | 2589715..2590041 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| LSI69_RS13080 (2590051) | 2590051..2590401 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| LSI69_RS13085 (2590398) | 2590398..2590844 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| LSI69_RS13090 (2590841) | 2590841..2591185 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| LSI69_RS13095 (2591251) | 2591251..2591967 | + | 717 | WP_001275434.1 | major tail subunit | - |
| LSI69_RS13100 (2591982) | 2591982..2592356 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| LSI69_RS13105 (2592452) | 2592452..2592661 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| LSI69_RS13110 (2592709) | 2592709..2595951 | + | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| LSI69_RS13115 (2595944) | 2595944..2596285 | + | 342 | WP_000807954.1 | phage tail protein | - |
| LSI69_RS13120 (2596285) | 2596285..2596983 | + | 699 | WP_001179481.1 | phage minor tail protein L | - |
| LSI69_RS13125 (2596994) | 2596994..2597737 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| LSI69_RS13130 (2597734) | 2597734..2598315 | + | 582 | WP_001089999.1 | tail assembly protein | - |
| LSI69_RS13135 (2598657) | 2598657..2602131 | + | 3475 | Protein_2579 | host specificity protein J | - |
| LSI69_RS13140 (2602199) | 2602199..2602798 | + | 600 | WP_001230508.1 | hypothetical protein | VF |
| LSI69_RS13145 (2602863) | 2602863..2604086 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| LSI69_RS13150 (2604088) | 2604088..2604357 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| LSI69_RS13155 (2604516) | 2604516..2605046 | + | 531 | WP_044386033.1 | hypothetical protein | VF |
| LSI69_RS13160 (2605757) | 2605757..2606407 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| LSI69_RS13165 (2606557) | 2606557..2606952 | + | 396 | Protein_2585 | IS256 family transposase ISEic2 | Transposase |
| LSI69_RS13170 (2606990) | 2606990..2608528 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| LSI69_RS13175 (2608578) | 2608578..2608925 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| LSI69_RS13180 (2608922) | 2608922..2609302 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| LSI69_RS13185 (2609397) | 2609397..2610215 | + | 819 | Protein_2589 | IS256 family transposase IS1414 | Transposase |
| LSI69_RS13190 (2610265) | 2610265..2610507 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| LSI69_RS13195 (2610685) | 2610685..2611236 | - | 552 | Protein_2591 | hypothetical protein ; Integrase | Integrase |
| LSI69_RS13200 (2611224) | 2611224..2612462 | - | 1239 | Protein_2592 | exonuclease | - |
| LSI69_RS13205 (2612555) | 2612555..2612743 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| LSI69_RS13210 (2612740) | 2612740..2612928 | - | 189 | WP_000449175.1 | cell division inhibition protein DicB | - |
| LSI69_RS13215 (2613493) | 2613493..2613702 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| LSI69_RS13220 (2613703) | 2613703..2614341 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| LSI69_RS13225 (2614353) | 2614353..2614505 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| LSI69_RS13230 (2614798) | 2614798..2615136 | - | 339 | WP_001416688.1 | S24 family peptidase | - |
| LSI69_RS13235 (2615528) | 2615528..2615770 | + | 243 | WP_000747948.1 | Cro/CI family transcriptional regulator | - |
| LSI69_RS13240 (2615754) | 2615754..2616179 | + | 426 | WP_000693878.1 | toxin YdaT family protein | - |
| LSI69_RS13245 (2616248) | 2616248..2617291 | + | 1044 | WP_001262402.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| LSI69_RS13250 (2617284) | 2617284..2617745 | + | 462 | WP_000139447.1 | replication protein P | - |
| LSI69_RS13255 (2617779) | 2617779..2618495 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| LSI69_RS13260 (2618528) | 2618528..2618809 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| LSI69_RS13265 (2618806) | 2618806..2619033 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| LSI69_RS13270 (2619026) | 2619026..2619337 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| LSI69_RS13280 (2620778) | 2620778..2620996 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| LSI69_RS13285 (2620998) | 2620998..2621555 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| LSI69_RS13290 (2621846) | 2621846..2622001 | + | 156 | WP_000813258.1 | Hok/Gef family protein | - |
| LSI69_RS13295 (2622121) | 2622121..2622465 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| LSI69_RS13300 (2622587) | 2622587..2622859 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| LSI69_RS13305 (2622861) | 2622861..2623910 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| LSI69_RS13310 (2623923) | 2623923..2624228 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LSI69_RS13315 (2624291) | 2624291..2624845 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| LSI69_RS13320 (2625070) | 2625070..2625267 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| LSI69_RS13325 (2625403) | 2625403..2626116 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| LSI69_RS13340 (2626567) | 2626567..2626998 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| LSI69_RS13345 (2626995) | 2626995..2627162 | + | 168 | WP_000216636.1 | DUF3927 family protein | - |
| LSI69_RS13350 (2627357) | 2627357..2627499 | - | 143 | Protein_2620 | hypothetical protein | - |
| LSI69_RS13355 (2627476) | 2627476..2629326 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| LSI69_RS13360 (2629765) | 2629765..2629980 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| LSI69_RS13365 (2629985) | 2629985..2630329 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| LSI69_RS13370 (2630380) | 2630380..2630913 | + | 534 | WP_000992137.1 | lysozyme | - |
| LSI69_RS13375 (2631184) | 2631184..2631753 | + | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| LSI69_RS13380 (2631753) | 2631753..2631899 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| LSI69_RS13385 (2632122) | 2632122..2632307 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| LSI69_RS13390 (2632833) | 2632833..2633147 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| LSI69_RS13395 (2633229) | 2633229..2633453 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| LSI69_RS13400 (2633840) | 2633840..2634385 | + | 546 | WP_000867493.1 | terminase small subunit | - |
| LSI69_RS13405 (2634360) | 2634360..2636285 | + | 1926 | WP_001027223.1 | phage terminase large subunit family protein | - |
| LSI69_RS13410 (2636282) | 2636282..2636488 | + | 207 | WP_000198153.1 | gpW family protein | - |
| LSI69_RS13415 (2636485) | 2636485..2638086 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| LSI69_RS13420 (2638067) | 2638067..2639386 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| LSI69_RS13425 (2639396) | 2639396..2639728 | + | 333 | WP_001295978.1 | head decoration protein | - |
| LSI69_RS13430 (2639784) | 2639784..2640809 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| LSI69_RS13435 (2640851) | 2640851..2641249 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| LSI69_RS13440 (2641261) | 2641261..2641614 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| LSI69_RS13445 (2641629) | 2641629..2642162 | + | 534 | WP_000975020.1 | phage tail protein | - |
| LSI69_RS13450 (2642159) | 2642159..2642554 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| LSI69_RS13455 (2642562) | 2642562..2643314 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| LSI69_RS13460 (2643328) | 2643328..2643750 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| LSI69_RS13465 (2643777) | 2643777..2644190 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| LSI69_RS13470 (2644171) | 2644171..2646783 | + | 2613 | WP_000081803.1 | phage tail tape measure protein | - |
| LSI69_RS13475 (2646780) | 2646780..2647109 | + | 330 | WP_000847298.1 | phage tail protein | - |
| LSI69_RS13480 (2647109) | 2647109..2647807 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| LSI69_RS13485 (2647818) | 2647818..2648561 | + | 744 | WP_000194798.1 | C40 family peptidase | - |
| LSI69_RS13490 (2648558) | 2648558..2649136 | + | 579 | WP_001302798.1 | tail assembly protein | - |
| LSI69_RS13495 (2649377) | 2649377..2652855 | + | 3479 | Protein_2649 | host specificity protein J | - |
| LSI69_RS13500 (2652923) | 2652923..2653522 | + | 600 | WP_001230508.1 | hypothetical protein | VF |
| LSI69_RS13505 (2653587) | 2653587..2654810 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| LSI69_RS13510 (2654812) | 2654812..2655081 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| LSI69_RS13515 (2655195) | 2655195..2655770 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| LSI69_RS13520 (2655843) | 2655843..2656472 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| LSI69_RS13525 (2656554) | 2656554..2657195 | + | 642 | WP_001143808.1 | hypothetical protein | VF |
| LSI69_RS13530 (2657357) | 2657357..2657599 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| LSI69_RS13535 (2657731) | 2657731..2659014 | + | 1284 | Protein_2657 | MHS family MFS transporter YdfJ | - |
| LSI69_RS13540 (2659103) | 2659103..2660563 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| LSI69_RS13545 (2660599) | 2660599..2660802 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| LSI69_RS13550 (2660979) | 2660979..2661665 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| LSI69_RS13555 (2661754) | 2661754..2662500 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA1008 | NC_002695 | 2157035..2254487 | 0.001 |