MGE detailed information
MGE type: Prophage MGE length: 73946 bp
Accession: NZ_CP088157 Location: 1535872..1609817 Organism: Staphylococcus aureus strain 199 Replicon: chromosome
Accession: NZ_CP088157 Location: 1535872..1609817 Organism: Staphylococcus aureus strain 199 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQK05_RS07375 (1531934) | 1531934..1533313 | - | 1380 | WP_000902105.1 | ATP-dependent DNA helicase RecQ | - |
| LQK05_RS07380 (1533303) | 1533303..1534256 | - | 954 | WP_001163807.1 | helix-turn-helix domain-containing protein | - |
| LQK05_RS07385 (1534364) | 1534364..1534612 | + | 249 | WP_001151997.1 | ferredoxin | - |
| LQK05_RS07390 (1534718) | 1534718..1535263 | - | 546 | WP_001186902.1 | ECF transporter S component | - |
| LQK05_RS07395 (1535542) | 1535542..1535655 | - | 114 | WP_223289582.1 | hypothetical protein | - |
| LQK05_RS07400 (1535872) | 1535872..1536786 | - | 915 | WP_000913222.1 | DUF1672 domain-containing protein | - |
| LQK05_RS07405 (1536861) | 1536861..1537007 | - | 147 | WP_001033756.1 | hypothetical protein | - |
| LQK05_RS07410 (1537000) | 1537000..1537950 | - | 951 | WP_069991982.1 | DUF1672 domain-containing protein | - |
| LQK05_RS07415 (1538008) | 1538008..1538925 | - | 918 | WP_000476874.1 | DUF1672 domain-containing protein | - |
| LQK05_RS07420 (1539016) | 1539016..1539201 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| LQK05_RS07425 (1539450) | 1539450..1540433 | - | 984 | WP_024937002.1 | Leucotoxin LukDv | VF |
| LQK05_RS07430 (1540429) | 1540429..1541367 | - | 939 | WP_000239544.1 | Gamma-hemolysin component C | VF |
| LQK05_RS07435 (1541758) | 1541758..1543212 | - | 1455 | WP_000909204.1 | N-acetylmuramoyl-L-alanine amidase | - |
| LQK05_RS07440 (1543223) | 1543223..1543525 | - | 303 | WP_000339144.1 | phage holin | - |
| LQK05_RS07445 (1543661) | 1543661..1543960 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| LQK05_RS07450 (1544006) | 1544006..1544170 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| LQK05_RS07455 (1544163) | 1544163..1544552 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| LQK05_RS07460 (1544552) | 1544552..1546018 | - | 1467 | WP_031791112.1 | BppU family phage baseplate upper protein | - |
| LQK05_RS07465 (1546018) | 1546018..1547928 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| LQK05_RS07470 (1547944) | 1547944..1548234 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| LQK05_RS07475 (1548234) | 1548234..1549817 | - | 1584 | WP_072519161.1 | prophage endopeptidase tail family protein | - |
| LQK05_RS07480 (1549826) | 1549826..1550650 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| LQK05_RS07485 (1550650) | 1550650..1556850 | - | 6201 | WP_217660047.1 | phage tail tape measure protein | - |
| LQK05_RS07490 (1556864) | 1556864..1557022 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| LQK05_RS07495 (1557073) | 1557073..1557414 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| LQK05_RS07500 (1557472) | 1557472..1557927 | - | 456 | WP_217654545.1 | Ig-like domain-containing protein | - |
| LQK05_RS07505 (1558019) | 1558019..1558660 | - | 642 | WP_000807536.1 | phage tail protein | - |
| LQK05_RS07510 (1558695) | 1558695..1559090 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| LQK05_RS07515 (1559091) | 1559091..1559492 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| LQK05_RS07520 (1559489) | 1559489..1559821 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| LQK05_RS07525 (1559833) | 1559833..1560111 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| LQK05_RS07530 (1560180) | 1560180..1561343 | - | 1164 | WP_072519191.1 | phage major capsid protein | - |
| LQK05_RS07535 (1561355) | 1561355..1562128 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| LQK05_RS07540 (1562112) | 1562112..1563350 | - | 1239 | WP_217654544.1 | phage portal protein | - |
| LQK05_RS07545 (1563355) | 1563355..1565046 | - | 1692 | WP_031867235.1 | terminase large subunit | - |
| LQK05_RS07550 (1565036) | 1565036..1565341 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| LQK05_RS07555 (1565468) | 1565468..1565782 | - | 315 | WP_000160685.1 | HNH endonuclease | - |
| LQK05_RS07560 (1565939) | 1565939..1566376 | - | 438 | WP_031883903.1 | transcriptional regulator | - |
| LQK05_RS07565 (1566389) | 1566389..1567756 | - | 1368 | WP_072519166.1 | DEAD/DEAH box helicase | - |
| LQK05_RS07570 (1567737) | 1567737..1568027 | - | 291 | WP_217654546.1 | VRR-NUC domain-containing protein | - |
| LQK05_RS07575 (1568161) | 1568161..1568259 | + | 99 | WP_001801650.1 | hypothetical protein | - |
| LQK05_RS07580 (1568368) | 1568368..1570815 | - | 2448 | WP_031865250.1 | virulence-associated E family protein | - |
| LQK05_RS07585 (1570867) | 1570867..1571067 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| LQK05_RS07590 (1571135) | 1571135..1571287 | - | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| LQK05_RS07595 (1571280) | 1571280..1571432 | - | 153 | WP_165793270.1 | hypothetical protein | - |
| LQK05_RS07600 (1571429) | 1571429..1571623 | - | 195 | WP_000132921.1 | hypothetical protein | - |
| LQK05_RS07605 (1571620) | 1571620..1571826 | - | 207 | WP_064140442.1 | DUF1381 domain-containing protein | - |
| LQK05_RS07610 (1571843) | 1571843..1572016 | - | 174 | WP_001209217.1 | hypothetical protein | - |
| LQK05_RS07615 (1572053) | 1572053..1572583 | - | 531 | WP_072519167.1 | dUTPase | - |
| LQK05_RS07620 (1572576) | 1572576..1573064 | - | 489 | WP_072519168.1 | DUF1024 family protein | - |
| LQK05_RS07625 (1573057) | 1573057..1573341 | - | 285 | WP_072519169.1 | hypothetical protein | - |
| LQK05_RS07630 (1573356) | 1573356..1573604 | - | 249 | WP_072519192.1 | SAV1978 family virulence-associated passenger protein | - |
| LQK05_RS07635 (1573613) | 1573613..1573813 | - | 201 | WP_015984498.1 | hypothetical protein | - |
| LQK05_RS07640 (1573816) | 1573816..1574073 | - | 258 | WP_015984497.1 | DUF3310 domain-containing protein | - |
| LQK05_RS07645 (1574073) | 1574073..1574474 | - | 402 | WP_000113981.1 | PVL family protein | - |
| LQK05_RS07650 (1574474) | 1574474..1574659 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| LQK05_RS07655 (1574672) | 1574672..1576624 | - | 1953 | WP_116838387.1 | DNA polymerase | - |
| LQK05_RS07660 (1576693) | 1576693..1577250 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| LQK05_RS07665 (1577276) | 1577276..1578442 | - | 1167 | WP_000762532.1 | DUF2800 domain-containing protein | - |
| LQK05_RS07670 (1578439) | 1578439..1578801 | - | 363 | WP_000279445.1 | hypothetical protein | - |
| LQK05_RS07675 (1578816) | 1578816..1579139 | - | 324 | WP_000174995.1 | hypothetical protein | - |
| LQK05_RS07680 (1579218) | 1579218..1579379 | - | 162 | WP_015986189.1 | DUF1270 family protein | - |
| LQK05_RS07685 (1579391) | 1579391..1579654 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| LQK05_RS07690 (1579679) | 1579679..1579894 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| LQK05_RS07695 (1579949) | 1579949..1580314 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| LQK05_RS07700 (1580283) | 1580283..1580528 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| LQK05_RS07705 (1580557) | 1580557..1581333 | - | 777 | WP_072519170.1 | Rha family transcriptional regulator | - |
| LQK05_RS07710 (1581347) | 1581347..1581583 | - | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| LQK05_RS07715 (1581735) | 1581735..1582049 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | - |
| LQK05_RS07720 (1582062) | 1582062..1582523 | + | 462 | WP_072519171.1 | toxin | Toxin Detail |
| LQK05_RS07725 (1582540) | 1582540..1583124 | + | 585 | WP_072519172.1 | hypothetical protein | - |
| LQK05_RS07730 (1583354) | 1583354..1583500 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| LQK05_RS07735 (1583497) | 1583497..1584111 | - | 615 | WP_000191457.1 | hypothetical protein | - |
| LQK05_RS07740 (1584237) | 1584237..1585442 | + | 1206 | WP_000264747.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| LQK05_RS07745 (1585485) | 1585485..1587511 | - | 2027 | Protein_1524 | hypothetical protein | - |
| LQK05_RS07750 (1587504) | 1587504..1588433 | - | 930 | WP_054189081.1 | DUF1672 domain-containing protein | - |
| LQK05_RS07755 (1588685) | 1588685..1590436 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| LQK05_RS07760 (1590417) | 1590417..1591142 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| LQK05_RS07765 (1591275) | 1591275..1592012 | - | 738 | WP_000159577.1 | pseudouridine synthase | - |
| LQK05_RS07770 (1592005) | 1592005..1592547 | - | 543 | WP_000368656.1 | SMC-Scp complex subunit ScpB | - |
| LQK05_RS07775 (1592540) | 1592540..1593271 | - | 732 | WP_000273378.1 | segregation/condensation protein A | - |
| LQK05_RS07780 (1593363) | 1593363..1593869 | + | 507 | WP_072519176.1 | DUF309 domain-containing protein | - |
| LQK05_RS07785 (1593947) | 1593947..1594834 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LQK05_RS07790 (1594883) | 1594883..1595332 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| LQK05_RS07795 (1595437) | 1595437..1595979 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| LQK05_RS07800 (1596061) | 1596061..1596969 | + | 909 | WP_001171337.1 | aldo/keto reductase | - |
| LQK05_RS07805 (1597185) | 1597185..1597433 | - | 249 | WP_240697030.1 | hypothetical protein | - |
| LQK05_RS07810 (1597449) | 1597449..1598204 | - | 756 | WP_000678234.1 | SDR family oxidoreductase | - |
| LQK05_RS07815 (1598346) | 1598346..1599161 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| LQK05_RS07820 (1599266) | 1599266..1600186 | - | 921 | WP_000454065.1 | ribonuclease Z | - |
| LQK05_RS07825 (1600499) | 1600499..1601983 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| LQK05_RS07830 (1602213) | 1602213..1603079 | + | 867 | WP_001814565.1 | AraC family transcriptional regulator | - |
| LQK05_RS07835 (1603161) | 1603161..1604810 | - | 1650 | WP_240697031.1 | alpha-glucosidase | - |
| LQK05_RS07840 (1604826) | 1604826..1605845 | - | 1020 | WP_077156049.1 | LacI family DNA-binding transcriptional regulator | - |
| LQK05_RS07845 (1605846) | 1605846..1606100 | - | 255 | WP_072398115.1 | hypothetical protein | - |
| LQK05_RS07850 (1606039) | 1606039..1606410 | - | 372 | WP_000413439.1 | VOC family protein | - |
| LQK05_RS07855 (1606654) | 1606654..1606848 | + | 195 | Protein_1546 | hypothetical protein | - |
| LQK05_RS07860 (1606878) | 1606878..1608095 | - | 1218 | WP_000122704.1 | MFS transporter | - |
| LQK05_RS07865 (1608411) | 1608411..1609817 | - | 1407 | WP_000193707.1 | 6-phosphogluconate dehydrogenase, decarboxylating | VF |
| LQK05_RS07870 (1609885) | 1609885..1611018 | - | 1134 | WP_000606684.1 | tripeptidase T | - |
| LQK05_RS07875 (1611281) | 1611281..1611460 | + | 180 | WP_001789875.1 | stressosome-associated protein Prli42 | - |
| LQK05_RS07880 (1611587) | 1611587..1612567 | - | 981 | WP_000916195.1 | aromatic acid exporter family protein | - |
| LQK05_RS07885 (1612581) | 1612581..1613018 | - | 438 | WP_072519179.1 | bacilliredoxin BrxB | - |
| LQK05_RS07890 (1613370) | 1613370..1614644 | - | 1275 | WP_000406848.1 | dihydrolipoamide acetyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|