MGE detailed information
MGE type: Genomic_island MGE length: 11453 bp
Accession: NZ_CP088138 Location: 2455244..2466696 Organism: Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549 Replicon: chromosome
Accession: NZ_CP088138 Location: 2455244..2466696 Organism: Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRM92_RS12005 (2451165) | 2451165..2452367 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| LRM92_RS12010 (2452380) | 2452380..2453831 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| LRM92_RS12015 (2453975) | 2453975..2454982 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| LRM92_RS12020 (2455241) | 2455241..2456707 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| LRM92_RS12025 (2457515) | 2457515..2458229 | + | 715 | Protein_2358 | helix-turn-helix domain-containing protein | - |
| LRM92_RS12030 (2458285) | 2458285..2459193 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| LRM92_RS12035 (2459336) | 2459336..2459668 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| LRM92_RS12040 (2459658) | 2459658..2459873 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| LRM92_RS12045 (2460025) | 2460025..2460273 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LRM92_RS12050 (2460263) | 2460263..2460547 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LRM92_RS12055 (2460718) | 2460718..2461107 | + | 390 | WP_000194089.1 | RidA family protein | - |
| LRM92_RS12060 (2461240) | 2461240..2461608 | - | 369 | Protein_2365 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| LRM92_RS12065 (2461801) | 2461801..2462289 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| LRM92_RS12070 (2462334) | 2462334..2463839 | + | 1506 | WP_156038052.1 | FAD-dependent oxidoreductase | - |
| LRM92_RS12075 (2463829) | 2463829..2465070 | + | 1242 | WP_156038051.1 | MFS transporter | - |
| LRM92_RS12080 (2465140) | 2465140..2466696 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| LRM92_RS12085 (2466873) | 2466873..2468159 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| LRM92_RS12090 (2468134) | 2468134..2469159 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| LRM92_RS12095 (2469218) | 2469218..2470009 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| LRM92_RS12100 (2470055) | 2470055..2471146 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0.002 |